Protein : Qrob_P0004290.2 Q. robur
Protein Identifier  ? Qrob_P0004290.2 Organism . Name  Quercus robur
Score  95.0 Score Type  egn
Protein Description  (M=1) 2.6.1.13 - Ornithine aminotransferase. Code Enzyme  EC:2.6.1.13
Gene Prediction Quality  validated Protein length 

Sequence

Length: 452  
Kegg Orthology  K00819
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0008483 transaminase activity Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.
GO:0030170 pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.

45 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101312030 24 446 + 423 none 87.40 484 88.42 0.0 probable ornithine aminotransferase-like
blastp_kegg lcl|pper:PRUPE_ppa005212mg 24 443 + 420 none 88.98 472 88.33 0.0 hypothetical protein
blastp_kegg lcl|pmum:103325146 24 443 + 420 none 88.98 472 88.57 0.0 ornithine aminotransferase mitochondrial
blastp_kegg lcl|pxb:103951298 24 451 + 428 none 89.54 478 86.68 0.0 ornithine aminotransferase mitochondrial
blastp_kegg lcl|mdm:103408898 24 446 + 423 none 88.49 478 88.18 0.0 ornithine aminotransferase mitochondrial-like
blastp_kegg lcl|mdm:103435006 24 451 + 428 none 89.54 478 86.92 0.0 ornithine aminotransferase mitochondrial-like
blastp_kegg lcl|rcu:RCOM_0631280 24 446 + 423 none 89.43 473 87.00 0.0 ornithine aminotransferase putative (EC:2.6.1.13)
blastp_kegg lcl|mdm:103419767 24 446 + 423 none 88.49 478 87.47 0.0 ornithine aminotransferase mitochondrial-like
blastp_kegg lcl|mdm:103435159 24 446 + 423 none 88.49 478 87.47 0.0 ornithine aminotransferase mitochondrial
blastp_kegg lcl|tcc:TCM_029451 24 450 + 427 Gaps:1 89.12 478 84.74 0.0 Ornithine-delta-aminotransferase isoform 1
blastp_pdb 2can_C 24 413 + 390 Gaps:7 95.27 402 54.31 1e-143 mol:protein length:402 ORNITHINE AMINOTRANSFERASE
blastp_pdb 2can_B 24 413 + 390 Gaps:7 95.27 402 54.31 1e-143 mol:protein length:402 ORNITHINE AMINOTRANSFERASE
blastp_pdb 2can_A 24 413 + 390 Gaps:7 95.27 402 54.31 1e-143 mol:protein length:402 ORNITHINE AMINOTRANSFERASE
blastp_pdb 1gbn_C 24 413 + 390 Gaps:7 95.27 402 54.31 1e-143 mol:protein length:402 ORNITHINE AMINOTRANSFERASE
blastp_pdb 1gbn_B 24 413 + 390 Gaps:7 95.27 402 54.31 1e-143 mol:protein length:402 ORNITHINE AMINOTRANSFERASE
blastp_pdb 1gbn_A 24 413 + 390 Gaps:7 95.27 402 54.31 1e-143 mol:protein length:402 ORNITHINE AMINOTRANSFERASE
blastp_pdb 2oat_C 24 413 + 390 Gaps:7 87.24 439 54.31 2e-143 mol:protein length:439 ORNITHINE AMINOTRANSFERASE
blastp_pdb 2oat_B 24 413 + 390 Gaps:7 87.24 439 54.31 2e-143 mol:protein length:439 ORNITHINE AMINOTRANSFERASE
blastp_pdb 2oat_A 24 413 + 390 Gaps:7 87.24 439 54.31 2e-143 mol:protein length:439 ORNITHINE AMINOTRANSFERASE
blastp_pdb 1oat_C 24 413 + 390 Gaps:7 87.24 439 54.31 2e-143 mol:protein length:439 ORNITHINE AMINOTRANSFERASE
blastp_uniprot_sprot sp|Q9FNK4|OAT_ARATH 24 445 + 422 none 88.84 475 80.33 0.0 Ornithine aminotransferase mitochondrial OS Arabidopsis thaliana GN DELTA-OAT PE 1 SV 1
blastp_uniprot_sprot sp|Q10G56|OAT_ORYSJ 24 444 + 421 none 89.01 473 78.15 0.0 Ornithine aminotransferase mitochondrial OS Oryza sativa subsp. japonica GN OAT PE 2 SV 1
blastp_uniprot_sprot sp|Q54JP5|OAT_DICDI 24 414 + 391 Gaps:5 92.79 416 56.48 1e-164 Probable ornithine aminotransferase OS Dictyostelium discoideum GN oatA PE 3 SV 1
blastp_uniprot_sprot sp|Q9P7L5|OAT_SCHPO 24 420 + 397 Gaps:12 91.55 438 57.36 2e-160 Ornithine aminotransferase car2 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN car2 PE 2 SV 1
blastp_uniprot_sprot sp|Q92413|OAT_EMENI 24 430 + 407 Gaps:12 90.53 454 53.28 9e-159 Ornithine aminotransferase OS Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN otaA PE 3 SV 2
blastp_uniprot_sprot sp|P07991|OAT_YEAST 24 414 + 391 Gaps:10 94.58 424 54.36 3e-150 Ornithine aminotransferase OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN CAR2 PE 1 SV 2
blastp_uniprot_sprot sp|C4L2E7|OAT_EXISA 24 413 + 390 Gaps:13 94.25 400 58.36 8e-150 Ornithine aminotransferase OS Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN rocD PE 3 SV 1
blastp_uniprot_sprot sp|Q9VW26|OAT_DROME 24 405 + 382 Gaps:9 86.54 431 56.03 7e-149 Ornithine aminotransferase mitochondrial OS Drosophila melanogaster GN Oat PE 2 SV 1
blastp_uniprot_sprot sp|C5D6R2|OAT_GEOSW 24 413 + 390 Gaps:12 94.97 398 57.94 5e-148 Ornithine aminotransferase OS Geobacillus sp. (strain WCH70) GN rocD PE 3 SV 1
blastp_uniprot_sprot sp|P49724|OAT_DROAN 24 405 + 382 Gaps:9 86.34 432 56.57 1e-147 Ornithine aminotransferase mitochondrial OS Drosophila ananassae GN Oat PE 1 SV 1

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
TIGRFAM 24 413 390 TIGR01885 "KEGG:00330+2.6.1.13","MetaCyc:PWY-3341","MetaCyc:PWY-4981","MetaCyc:PWY-6344","MetaCyc:PWY-6922","UniPathway:UPA00098" Orn_aminotrans: ornithine--oxo-acid transaminase IPR010164
PANTHER 13 429 417 PTHR11986 none none IPR005814
ProSitePatterns 232 269 38 PS00600 none Aminotransferases class-III pyridoxal-phosphate attachment site. IPR005814
Gene3D 64 300 237 G3DSA:3.40.640.10 none none IPR015421
Pfam 33 358 326 PF00202 none Aminotransferase class-III IPR005814
PANTHER 13 429 417 PTHR11986:SF18 "KEGG:00330+2.6.1.13","MetaCyc:PWY-3341","MetaCyc:PWY-4981","MetaCyc:PWY-6344","MetaCyc:PWY-6922","UniPathway:UPA00098";signature_desc=ORNITHINE AMINOTRANSFERASE none IPR010164
SUPERFAMILY 14 414 401 SSF53383 none none IPR015424
Gene3D 301 414 114 G3DSA:3.90.1150.10 none none IPR015422

0 Localization

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting