Protein : Qrob_P0003660.2 Q. robur
Protein Identifier  ? Qrob_P0003660.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) PTHR13890:SF5 - MAGNESIUM TRANSPORTER MRS2-1-RELATED (PTHR13890:SF5) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 457  
Kegg Orthology  K16075
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0030001 metal ion transport The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0046873 metal ion transmembrane transporter activity Enables the transfer of metal ions from one side of a membrane to the other.
GO:0015095 magnesium ion transmembrane transporter activity Enables the transfer of magnesium (Mg) ions from one side of a membrane to the other.
GO:0015693 magnesium ion transport The directed movement of magnesium (Mg) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100262794 1 455 + 455 Gaps:43 99.76 421 76.19 0.0 magnesium transporter MRS2-5-like
blastp_kegg lcl|tcc:TCM_011528 1 456 + 456 Gaps:40 100.00 418 75.12 0.0 Magnesium transporter 3 isoform 1
blastp_kegg lcl|mdm:103414278 1 456 + 456 Gaps:43 100.00 421 75.30 0.0 magnesium transporter MRS2-5-like
blastp_kegg lcl|mdm:103451763 1 456 + 456 Gaps:43 100.00 421 75.30 0.0 magnesium transporter MRS2-5
blastp_kegg lcl|pop:POPTR_0008s09570g 1 456 + 456 Gaps:43 100.00 419 76.13 0.0 POPTRDRAFT_564302 magnesium transporter CorA-like family protein
blastp_kegg lcl|pxb:103947254 1 456 + 456 Gaps:43 100.00 421 74.11 0.0 magnesium transporter MRS2-5
blastp_kegg lcl|cic:CICLE_v10031664mg 1 456 + 456 Gaps:41 100.00 415 75.42 0.0 hypothetical protein
blastp_kegg lcl|cit:102612283 1 456 + 456 Gaps:41 100.00 415 75.42 0.0 magnesium transporter MRS2-5-like
blastp_kegg lcl|pper:PRUPE_ppa006302mg 1 456 + 456 Gaps:44 100.00 418 76.79 0.0 hypothetical protein
blastp_kegg lcl|fve:101309533 14 456 + 443 Gaps:59 97.04 439 72.07 0.0 magnesium transporter MRS2-5-like
blastp_uniprot_sprot sp|Q9ZPR4|MRS25_ARATH 1 456 + 456 Gaps:49 100.00 421 68.65 1e-178 Magnesium transporter MRS2-5 OS Arabidopsis thaliana GN MRS2-5 PE 1 SV 1
blastp_uniprot_sprot sp|Q67UQ7|MRS2B_ORYSJ 27 456 + 430 Gaps:45 89.68 436 60.61 1e-150 Magnesium transporter MRS2-B OS Oryza sativa subsp. japonica GN MRS2-B PE 2 SV 1
blastp_uniprot_sprot sp|A2YFN7|MRS2B_ORYSI 27 456 + 430 Gaps:45 89.68 436 60.61 1e-150 Magnesium transporter MRS2-B OS Oryza sativa subsp. indica GN MRS2-B PE 3 SV 1
blastp_uniprot_sprot sp|Q9SAH0|MRS2A_ARATH 40 456 + 417 Gaps:71 90.74 443 59.20 6e-150 Magnesium transporter MRS2-10 OS Arabidopsis thaliana GN MRS2-10 PE 2 SV 1
blastp_uniprot_sprot sp|Q9S9N4|MRS21_ARATH 40 456 + 417 Gaps:72 90.72 442 59.10 1e-148 Magnesium transporter MRS2-1 OS Arabidopsis thaliana GN MRS2-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q0JBZ6|MRS2C_ORYSJ 40 456 + 417 Gaps:57 89.72 428 58.85 5e-131 Magnesium transporter MRS2-C OS Oryza sativa subsp. japonica GN MRS2-C PE 3 SV 3
blastp_uniprot_sprot sp|A2XV81|MRS2C_ORYSI 40 456 + 417 Gaps:57 89.72 428 58.85 5e-131 Magnesium transporter MRS2-C OS Oryza sativa subsp. indica GN H0311C03.3 PE 3 SV 2
blastp_uniprot_sprot sp|Q304A0|MRS27_ARATH 35 451 + 417 Gaps:74 95.60 386 45.80 3e-89 Magnesium transporter MRS2-7 OS Arabidopsis thaliana GN MRS2-7 PE 2 SV 1
blastp_uniprot_sprot sp|B8AJT9|MRS2I_ORYSI 42 451 + 410 Gaps:71 93.70 381 47.62 3e-77 Magnesium transporter MRS2-I OS Oryza sativa subsp. indica GN MRS2-I PE 3 SV 1
blastp_uniprot_sprot sp|Q10D38|MRS2I_ORYSJ 42 451 + 410 Gaps:71 92.97 384 47.62 4e-77 Magnesium transporter MRS2-I OS Oryza sativa subsp. japonica GN MRS2-I PE 2 SV 1
rpsblast_kog gnl|CDD|37873 9 456 + 448 Gaps:83 94.93 414 47.84 1e-105 KOG2662 KOG2662 KOG2662 Magnesium transporters: CorA family [Inorganic ion transport and metabolism].

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 317 456 140 PTHR13890:SF5 none none none
PANTHER 209 296 88 PTHR13890:SF5 none none none
Phobius 1 188 188 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Coils 233 261 29 Coil none none none
Phobius 209 391 183 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 351 444 94 PF01544 none CorA-like Mg2+ transporter protein IPR002523
Phobius 189 208 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 392 413 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 375 444 70 G3DSA:1.20.58.340 none none none
Phobius 425 448 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 11 171 161 PTHR13890:SF5 none none none
Phobius 449 456 8 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 414 424 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 392 445 54 SSF144083 none none none
PANTHER 317 456 140 PTHR13890 none none IPR026573
PANTHER 11 171 161 PTHR13890 none none IPR026573
PANTHER 209 296 88 PTHR13890 none none IPR026573

2 Localization

Analysis Start End Length
TMHMM 390 412 22
TMHMM 425 447 22

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting