Protein : Qrob_P0003500.2 Q. robur
Protein Identifier  ? Qrob_P0003500.2 Organism . Name  Quercus robur
Score  89.0 Score Type  egn
Protein Description  (M=3) KOG0254//KOG0255//KOG0569 - Predicted transporter (major facilitator superfamily) [General function prediction only]. // Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]. // Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 360  
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0022857 transmembrane transporter activity Enables the transfer of a substance from one side of a membrane to the other.
GO:0022891 substrate-specific transmembrane transporter activity Enables the transfer of a specific substance or group of related substances from one side of a membrane to the other.

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103344693 1 339 + 339 Gaps:87 83.23 495 64.32 5e-169 sugar transporter ERD6-like 5
blastp_kegg lcl|tcc:TCM_046816 1 339 + 339 Gaps:87 84.77 486 65.29 7e-168 Major facilitator superfamily protein
blastp_kegg lcl|fve:101306742 1 341 + 341 Gaps:175 86.48 954 56.61 1e-165 uncharacterized protein LOC101306742
blastp_kegg lcl|cic:CICLE_v10001032mg 2 336 + 335 Gaps:87 86.08 474 65.20 5e-165 hypothetical protein
blastp_kegg lcl|cit:102624574 2 336 + 335 Gaps:87 86.08 474 65.20 5e-165 sugar transporter ERD6-like 5-like
blastp_kegg lcl|pop:POPTR_0013s02850g 1 339 + 339 Gaps:87 86.37 477 63.35 5e-164 POPTRDRAFT_893802 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1430100 1 339 + 339 Gaps:87 84.43 488 64.32 2e-163 sugar transporter putative (EC:1.3.1.74)
blastp_kegg lcl|pper:PRUPE_ppa004943mg 1 339 + 339 Gaps:76 82.85 484 63.59 3e-161 hypothetical protein
blastp_kegg lcl|mdm:103430485 1 336 + 336 Gaps:87 82.96 493 63.33 7e-161 sugar transporter ERD6-like 5
blastp_kegg lcl|vvi:100265873 1 341 + 341 Gaps:87 84.84 488 61.59 2e-159 putative ERD6-like transporter
blastp_uniprot_sprot sp|Q3ECP7|ERDL5_ARATH 2 333 + 332 Gaps:87 86.17 470 54.81 5e-134 Sugar transporter ERD6-like 5 OS Arabidopsis thaliana GN At1g54730 PE 2 SV 2
blastp_uniprot_sprot sp|P93051|ERDL7_ARATH 2 334 + 333 Gaps:87 87.69 463 46.06 4e-113 Sugar transporter ERD6-like 7 OS Arabidopsis thaliana GN At2g48020 PE 2 SV 2
blastp_uniprot_sprot sp|Q8LBI9|EDL16_ARATH 2 333 + 332 Gaps:88 84.23 482 44.83 1e-103 Sugar transporter ERD6-like 16 OS Arabidopsis thaliana GN At5g18840 PE 2 SV 2
blastp_uniprot_sprot sp|Q0WQ63|ERDL8_ARATH 1 330 + 330 Gaps:88 85.96 470 45.79 3e-102 Sugar transporter ERD6-like 8 OS Arabidopsis thaliana GN At3g05150 PE 2 SV 1
blastp_uniprot_sprot sp|Q94CI6|EDL18_ARATH 1 332 + 332 Gaps:87 84.73 478 41.23 2e-93 Sugar transporter ERD6-like 18 OS Arabidopsis thaliana GN SFP2 PE 2 SV 1
blastp_uniprot_sprot sp|Q94AF9|EDL11_ARATH 1 333 + 333 Gaps:87 86.94 467 40.64 4e-93 Sugar transporter ERD6-like 11 OS Arabidopsis thaliana GN At3g05165 PE 2 SV 2
blastp_uniprot_sprot sp|Q94CI7|EDL17_ARATH 1 332 + 332 Gaps:87 85.44 474 41.98 2e-92 Sugar transporter ERD6-like 17 OS Arabidopsis thaliana GN SFP1 PE 2 SV 2
blastp_uniprot_sprot sp|Q93Z80|EDL10_ARATH 1 333 + 333 Gaps:87 88.65 458 40.39 5e-92 Sugar transporter ERD6-like 10 OS Arabidopsis thaliana GN At3g05160 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M0Z9|EDL15_ARATH 1 330 + 330 Gaps:90 84.94 478 41.38 1e-90 Sugar transporter ERD6-like 15 OS Arabidopsis thaliana GN At4g04760 PE 3 SV 2
blastp_uniprot_sprot sp|Q94KE0|ERDL3_ARATH 1 335 + 335 Gaps:87 86.81 470 41.42 2e-89 Sugar transporter ERD6-like 3 OS Arabidopsis thaliana GN SUGTL2 PE 2 SV 1
rpsblast_cdd gnl|CDD|200987 2 330 + 329 Gaps:102 91.09 449 27.38 1e-37 pfam00083 Sugar_tr Sugar (and other) transporter.
rpsblast_cdd gnl|CDD|162084 5 328 + 324 Gaps:109 86.28 481 26.27 2e-33 TIGR00879 SP MFS transporter sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083).
rpsblast_cdd gnl|CDD|182225 26 339 + 314 Gaps:70 65.97 479 29.75 1e-28 PRK10077 xylE D-xylose transporter XylE Provisional.
rpsblast_cdd gnl|CDD|162097 13 327 + 315 Gaps:103 74.06 505 20.59 1e-10 TIGR00898 2A0119 cation transport protein.
rpsblast_kog gnl|CDD|35475 4 333 + 330 Gaps:98 81.09 513 26.92 4e-45 KOG0254 KOG0254 KOG0254 Predicted transporter (major facilitator superfamily) [General function prediction only].
rpsblast_kog gnl|CDD|35789 11 332 + 322 Gaps:104 84.12 485 25.74 1e-31 KOG0569 KOG0569 KOG0569 Permease of the major facilitator superfamily [Carbohydrate transport and metabolism].
rpsblast_kog gnl|CDD|35476 15 327 + 313 Gaps:37 60.65 521 22.78 3e-13 KOG0255 KOG0255 KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only].

30 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 334 334 PTHR24063:SF245 none none none
Phobius 268 287 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 212 230 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 231 256 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 160 164 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 65 84 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 12 30 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 165 327 163 G3DSA:1.20.1250.20 none none none
Phobius 299 317 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 143 159 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 318 359 42 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 165 184 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 31 41 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 42 59 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 185 190 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 85 142 58 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 288 298 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 257 267 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 173 330 158 PF00083 none Sugar (and other) transporter IPR005828
Phobius 1 11 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PRINTS 46 65 20 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 234 255 22 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 257 269 13 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 157 167 11 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
Phobius 60 64 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 1 334 334 PTHR24063 none none none
Gene3D 3 89 87 G3DSA:1.20.1250.20 none none none
ProSiteProfiles 1 321 321 PS50850 none Major facilitator superfamily (MFS) profile. IPR020846
Phobius 191 211 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 2 329 328 SSF103473 none none IPR020846

8 Localization

Analysis Start End Length
TMHMM 13 35 22
TMHMM 267 289 22
TMHMM 299 318 19
TMHMM 62 84 22
TMHMM 165 184 19
TMHMM 191 213 22
TMHMM 143 160 17
TMHMM 233 255 22

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 30   Secretory pathway 4 0.847 0.012 NON-PLANT 30