Protein : Qrob_P0002960.2 Q. robur
Protein Identifier  ? Qrob_P0002960.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) PTHR31221:SF8 - WRKY TRANSCRIPTION FACTOR 57-RELATED (PTHR31221:SF8) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 315  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0043565 sequence-specific DNA binding Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.

25 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0010s16760g 1 312 + 312 Gaps:25 100.00 293 66.89 2e-116 POPTRDRAFT_226173 hypothetical protein
blastp_kegg lcl|vvi:100262937 1 313 + 313 Gaps:27 99.67 305 64.47 3e-115 probable WRKY transcription factor 57-like
blastp_kegg lcl|pop:POPTR_0008s09360g 1 312 + 312 Gaps:23 100.00 293 66.89 1e-112 POPTRDRAFT_656500 hypothetical protein
blastp_kegg lcl|tcc:TCM_011578 1 314 + 314 Gaps:24 100.00 304 65.79 2e-112 WRKY DNA-binding protein 57 isoform 1
blastp_kegg lcl|pper:PRUPE_ppa008480mg 2 314 + 313 Gaps:57 99.39 330 60.67 3e-104 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_002G081600g 1 314 + 314 Gaps:48 100.00 292 67.47 4e-104 hypothetical protein
blastp_kegg lcl|pmum:103321497 11 314 + 304 Gaps:53 96.06 330 61.51 6e-104 probable WRKY transcription factor 57
blastp_kegg lcl|gmx:100170676 1 314 + 314 Gaps:51 100.00 293 67.58 4e-102 WRKY28 transcription factor
blastp_kegg lcl|gmx:100127427 1 314 + 314 Gaps:53 100.00 297 65.66 6e-101 WRKY32 WRKY32 protein
blastp_kegg lcl|pxb:103947236 2 313 + 312 Gaps:50 99.38 322 59.69 1e-96 probable WRKY transcription factor 57
blastp_pdb 2lex_A 161 228 + 68 none 87.18 78 63.24 5e-25 mol:protein length:78 Probable WRKY transcription factor 4
blastp_pdb 1wj2_A 161 228 + 68 none 87.18 78 63.24 5e-25 mol:protein length:78 Probable WRKY transcription factor 4
blastp_pdb 2ayd_A 159 228 + 70 none 92.11 76 61.43 2e-23 mol:protein length:76 WRKY transcription factor 1
blastp_uniprot_sprot sp|Q9C983|WRK57_ARATH 16 313 + 298 Gaps:54 95.47 287 56.93 1e-76 Probable WRKY transcription factor 57 OS Arabidopsis thaliana GN WRKY57 PE 2 SV 1
blastp_uniprot_sprot sp|Q93WV4|WRK71_ARATH 156 308 + 153 Gaps:4 54.96 282 50.97 2e-40 Probable WRKY transcription factor 71 OS Arabidopsis thaliana GN WRKY71 PE 2 SV 1
blastp_uniprot_sprot sp|O22900|WRK23_ARATH 146 228 + 83 none 24.63 337 78.31 5e-39 Probable WRKY transcription factor 23 OS Arabidopsis thaliana GN WRKY23 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VWJ2|WRK28_ARATH 146 228 + 83 none 26.10 318 78.31 7e-39 Probable WRKY transcription factor 28 OS Arabidopsis thaliana GN WRKY28 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FGZ4|WRK48_ARATH 156 312 + 157 Gaps:38 45.36 399 46.96 5e-37 Probable WRKY transcription factor 48 OS Arabidopsis thaliana GN WRKY48 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SVB7|WRK13_ARATH 131 257 + 127 Gaps:5 40.13 304 53.28 1e-35 Probable WRKY transcription factor 13 OS Arabidopsis thaliana GN WRKY13 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FL26|WRKY8_ARATH 158 228 + 71 none 21.78 326 83.10 2e-35 Probable WRKY transcription factor 8 OS Arabidopsis thaliana GN WRKY8 PE 2 SV 1
blastp_uniprot_sprot sp|Q93WY4|WRK12_ARATH 133 228 + 96 Gaps:6 41.28 218 65.56 8e-32 Probable WRKY transcription factor 12 OS Arabidopsis thaliana GN WRKY12 PE 2 SV 1
blastp_uniprot_sprot sp|Q93WV6|WRK68_ARATH 148 228 + 81 Gaps:2 28.52 277 68.35 3e-30 Probable WRKY transcription factor 68 OS Arabidopsis thaliana GN WRKY68 PE 2 SV 1
blastp_uniprot_sprot sp|Q8GY11|WRK43_ARATH 153 228 + 76 none 69.72 109 64.47 4e-28 Probable WRKY transcription factor 43 OS Arabidopsis thaliana GN WRKY43 PE 1 SV 1
rpsblast_cdd gnl|CDD|197869 171 228 + 58 Gaps:1 100.00 59 64.41 2e-29 smart00774 WRKY DNA binding domain. The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants including pathogen defense senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T) which is known as the W box. The invariant TGAC core is essential for function and WRKY binding.
rpsblast_cdd gnl|CDD|145969 171 229 + 59 none 98.33 60 74.58 3e-28 pfam03106 WRKY WRKY DNA -binding domain.

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 89 312 224 PTHR31221 none none none
SUPERFAMILY 163 229 67 SSF118290 none none IPR003657
ProSiteProfiles 166 231 66 PS50811 none WRKY domain profile. IPR003657
PANTHER 89 312 224 PTHR31221:SF8 none none IPR017396
SMART 171 230 60 SM00774 none DNA binding domain IPR003657
Gene3D 156 230 75 G3DSA:2.20.25.80 none none IPR003657
Pfam 172 229 58 PF03106 none WRKY DNA -binding domain IPR003657

0 Localization

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting