Protein : Qrob_P0001430.2 Q. robur
Protein Identifier  ? Qrob_P0001430.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) 2.6.1.45 - Serine--glyoxylate transaminase. Code Enzyme  EC:2.6.1.51, EC:2.6.1.44, EC:2.6.1.45
Gene Prediction Quality  validated Protein length 

Sequence

Length: 402  
Kegg Orthology  K00830
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0063050 1 401 + 401 none 100.00 401 94.01 0.0 serine-pyruvate aminotransferase putative (EC:2.6.1.45)
blastp_kegg lcl|pop:POPTR_0009s05240g 1 401 + 401 none 100.00 401 91.52 0.0 POPTRDRAFT_723016 aminotransferase 2 family protein
blastp_kegg lcl|tcc:TCM_040844 1 401 + 401 none 100.00 401 91.02 0.0 Alanine:glyoxylate aminotransferase isoform 1
blastp_kegg lcl|pmum:103326783 1 401 + 401 none 100.00 401 90.77 0.0 serine--glyoxylate aminotransferase
blastp_kegg lcl|cic:CICLE_v10015490mg 1 401 + 401 none 100.00 401 91.02 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0001s26020g 1 401 + 401 none 100.00 401 90.77 0.0 POPTRDRAFT_815301 aminotransferase 2 family protein
blastp_kegg lcl|pper:PRUPE_ppa006653mg 1 401 + 401 none 100.00 401 90.52 0.0 hypothetical protein
blastp_kegg lcl|pda:103723389 1 401 + 401 none 100.00 401 91.77 0.0 serine--glyoxylate aminotransferase
blastp_kegg lcl|pxb:103934581 1 401 + 401 none 100.00 401 90.52 0.0 serine--glyoxylate aminotransferase
blastp_kegg lcl|pxb:103930865 1 401 + 401 none 100.00 401 90.27 0.0 serine--glyoxylate aminotransferase-like
blastp_pdb 1vjo_A 12 352 + 341 Gaps:16 85.75 393 32.34 2e-41 mol:protein length:393 alanine--glyoxylate aminotransferase
blastp_pdb 2dr1_B 9 355 + 347 Gaps:7 88.60 386 29.82 6e-40 mol:protein length:386 386aa long hypothetical serine aminotransfera
blastp_pdb 2dr1_A 9 355 + 347 Gaps:7 88.60 386 29.82 6e-40 mol:protein length:386 386aa long hypothetical serine aminotransfera
blastp_pdb 2huu_B 12 353 + 342 Gaps:13 86.77 393 31.67 3e-39 mol:protein length:393 Alanine glyoxylate aminotransferase
blastp_pdb 2huu_A 12 353 + 342 Gaps:13 86.77 393 31.67 3e-39 mol:protein length:393 Alanine glyoxylate aminotransferase
blastp_pdb 2hui_B 12 353 + 342 Gaps:13 86.77 393 31.67 3e-39 mol:protein length:393 Alanine glyoxylate aminotransferase
blastp_pdb 2hui_A 12 353 + 342 Gaps:13 86.77 393 31.67 3e-39 mol:protein length:393 Alanine glyoxylate aminotransferase
blastp_pdb 2huf_B 12 353 + 342 Gaps:13 86.77 393 31.67 3e-39 mol:protein length:393 Alanine glyoxylate aminotransferase
blastp_pdb 2huf_A 12 353 + 342 Gaps:13 86.77 393 31.67 3e-39 mol:protein length:393 Alanine glyoxylate aminotransferase
blastp_pdb 3isl_B 12 392 + 381 Gaps:27 95.19 416 26.26 5e-37 mol:protein length:416 Purine catabolism protein pucG
blastp_uniprot_sprot sp|Q56YA5|SGAT_ARATH 1 401 + 401 none 100.00 401 87.53 0.0 Serine--glyoxylate aminotransferase OS Arabidopsis thaliana GN AGT1 PE 1 SV 2
blastp_uniprot_sprot sp|P55819|SGAA_METEA 7 393 + 387 Gaps:6 97.26 402 57.29 1e-155 Serine--glyoxylate aminotransferase OS Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN sgaA PE 3 SV 2
blastp_uniprot_sprot sp|O08374|SGAA_HYPME 11 393 + 383 Gaps:3 94.81 405 54.69 3e-146 Serine--glyoxylate aminotransferase OS Hyphomicrobium methylovorum GN sgaA PE 3 SV 2
blastp_uniprot_sprot sp|P16421|DHSS_ANACY 12 375 + 364 Gaps:5 93.73 383 35.93 7e-70 Soluble hydrogenase 42 kDa subunit OS Anabaena cylindrica PE 1 SV 1
blastp_uniprot_sprot sp|Q58369|Y959_METJA 12 386 + 375 Gaps:8 95.84 385 37.13 3e-67 Uncharacterized aminotransferase MJ0959 OS Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN MJ0959 PE 3 SV 1
blastp_uniprot_sprot sp|P14776|DHSS_SYNP1 12 392 + 381 Gaps:6 98.18 384 33.69 2e-62 Soluble hydrogenase small subunit OS Synechococcus sp. (strain PCC 6716) PE 3 SV 1
blastp_uniprot_sprot sp|O32148|PUCG_BACSU 12 392 + 381 Gaps:27 95.19 416 26.26 2e-36 Purine catabolism protein PucG OS Bacillus subtilis (strain 168) GN pucG PE 1 SV 1
blastp_uniprot_sprot sp|P21549|SPYA_HUMAN 12 352 + 341 Gaps:18 86.99 392 30.79 4e-32 Serine--pyruvate aminotransferase OS Homo sapiens GN AGXT PE 1 SV 1
blastp_uniprot_sprot sp|Q54GT6|SPYA_DICDI 12 353 + 342 Gaps:38 88.94 407 27.90 5e-32 Serine--pyruvate aminotransferase OS Dictyostelium discoideum GN agxt PE 3 SV 1
blastp_uniprot_sprot sp|P43567|AGX1_YEAST 12 371 + 360 Gaps:27 97.40 385 27.20 1e-30 Alanine--glyoxylate aminotransferase 1 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN AGX1 PE 1 SV 1

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 22 265 244 G3DSA:3.40.640.10 none none IPR015421
SUPERFAMILY 9 375 367 SSF53383 none none IPR015424
Gene3D 266 376 111 G3DSA:3.90.1150.10 none none IPR015422
PANTHER 1 401 401 PTHR21152 none none none
ProSitePatterns 192 212 21 PS00595 none Aminotransferases class-V pyridoxal-phosphate attachment site. IPR020578
Pfam 12 323 312 PF00266 none Aminotransferase class-V IPR000192
PIRSF 6 395 390 PIRSF000524 "KEGG:00440+2.6.1.37","MetaCyc:PWY-6832" none IPR024169

0 Localization

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting