Protein : Qrob_P0000980.2 Q. robur
Protein Identifier  ? Qrob_P0000980.2 Organism . Name  Quercus robur
Score  84.0 Score Type  egn
Protein Description  (M=6) PTHR12506 - PROTEIN PHOSPHATASE RELATED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 211  
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Protein Sequence Displayer

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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10011741mg 14 179 + 166 Gaps:2 57.25 407 72.10 9e-86 hypothetical protein
blastp_kegg lcl|cit:102619714 14 179 + 166 Gaps:2 53.08 439 72.10 2e-85 zinc finger CCCH domain-containing protein ZFN-like
blastp_kegg lcl|csv:101221929 35 179 + 145 none 67.57 367 71.77 8e-85 zinc finger CCCH domain-containing protein ZFN-like
blastp_kegg lcl|pmum:103318785 14 176 + 163 Gaps:2 52.04 442 72.17 1e-84 zinc finger CCCH domain-containing protein ZFN-like
blastp_kegg lcl|pper:PRUPE_ppa005813mg 14 176 + 163 Gaps:2 52.04 442 72.61 1e-84 hypothetical protein
blastp_kegg lcl|cmo:103487234 35 179 + 145 none 56.75 437 71.77 4e-84 zinc finger CCCH domain-containing protein ZFN-like
blastp_kegg lcl|mdm:103419527 14 176 + 163 Gaps:2 52.04 442 72.17 9e-84 zinc finger CCCH domain-containing protein ZFN-like
blastp_kegg lcl|tcc:TCM_025260 14 179 + 166 Gaps:2 51.66 451 71.24 3e-83 Zinc finger CCCH domain-containing protein 33 isoform 1
blastp_kegg lcl|mdm:103423604 14 192 + 179 Gaps:10 57.21 444 66.93 4e-83 zinc finger CCCH domain-containing protein ZFN-like
blastp_kegg lcl|fve:101311772 14 179 + 166 Gaps:2 52.71 442 70.39 6e-83 zinc finger CCCH domain-containing protein ZFN-like
blastp_uniprot_sprot sp|Q9SWF9|ZFNL_PEA 14 193 + 180 Gaps:5 67.15 417 66.43 1e-82 Zinc finger CCCH domain-containing protein ZFN-like OS Pisum sativum PE 2 SV 1
blastp_uniprot_sprot sp|Q5JLB5|C3H12_ORYSJ 35 169 + 135 Gaps:9 66.29 439 56.70 5e-62 Zinc finger CCCH domain-containing protein 12 OS Oryza sativa subsp. japonica GN Os01g0917400 PE 2 SV 2
blastp_uniprot_sprot sp|Q2R4J4|C3H63_ORYSJ 35 186 + 152 Gaps:3 63.06 444 58.57 2e-61 Zinc finger CCCH domain-containing protein 63 OS Oryza sativa subsp. japonica GN Os11g0472000 PE 2 SV 2
blastp_uniprot_sprot sp|Q2QT65|C3H66_ORYSJ 16 183 + 168 Gaps:6 66.08 454 53.33 1e-60 Zinc finger CCCH domain-containing protein 66 OS Oryza sativa subsp. japonica GN Os12g0405100 PE 2 SV 1
blastp_uniprot_sprot sp|Q8GXX7|C3H33_ARATH 35 179 + 145 Gaps:20 61.21 397 64.20 8e-58 Zinc finger CCCH domain-containing protein 33 OS Arabidopsis thaliana GN ZFN1 PE 1 SV 1
blastp_uniprot_sprot sp|Q8L7N8|C3H57_ARATH 16 152 + 137 Gaps:20 70.13 375 55.13 2e-43 Zinc finger CCCH domain-containing protein 57 OS Arabidopsis thaliana GN ZFN3 PE 2 SV 2
blastp_uniprot_sprot sp|Q84W91|C3H32_ARATH 35 171 + 137 Gaps:13 53.85 468 54.37 4e-36 Zinc finger CCCH domain-containing protein 32 OS Arabidopsis thaliana GN At2g47850 PE 2 SV 2
blastp_uniprot_sprot sp|Q6NPN3|C3H58_ARATH 35 176 + 142 Gaps:13 48.17 465 43.75 4e-32 Zinc finger CCCH domain-containing protein 58 OS Arabidopsis thaliana GN At5g18550 PE 2 SV 1
blastp_uniprot_sprot sp|Q5NAW2|C3H6_ORYSJ 35 171 + 137 Gaps:4 44.12 476 47.14 5e-31 Zinc finger CCCH domain-containing protein 6 OS Oryza sativa subsp. japonica GN Os01g0258700 PE 2 SV 2
blastp_uniprot_sprot sp|Q94AD9|C3H3_ARATH 35 176 + 142 Gaps:22 57.43 404 41.81 7e-30 Zinc finger CCCH domain-containing protein 3 OS Arabidopsis thaliana GN At1g04990 PE 2 SV 1
rpsblast_kog gnl|CDD|36890 32 179 + 148 Gaps:14 40.96 332 29.41 5e-14 KOG1677 KOG1677 KOG1677 CCCH-type Zn-finger protein [General function prediction only].

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 73 101 29 PS50103 none Zinc finger C3H1-type profile. IPR000571
Pfam 76 100 25 PF00642 none Zinc finger C-x8-C-x5-C-x3-H type (and similar) IPR000571
Pfam 35 54 20 PF00642 none Zinc finger C-x8-C-x5-C-x3-H type (and similar) IPR000571
SUPERFAMILY 74 101 28 SSF90229 none none none
Gene3D 79 99 21 G3DSA:4.10.1000.10 none none IPR000571
Gene3D 35 54 20 G3DSA:4.10.1000.10 none none IPR000571
SMART 73 100 28 SM00356 none zinc finger IPR000571
SMART 32 54 23 SM00356 none zinc finger IPR000571
SUPERFAMILY 35 56 22 SSF90229 none none none
ProSiteProfiles 35 55 21 PS50103 none Zinc finger C3H1-type profile. IPR000571
PANTHER 35 171 137 PTHR12506 none none none

0 Localization

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting