Protein : Qrob_P0000970.2 Q. robur
Protein Identifier  ? Qrob_P0000970.2 Organism . Name  Quercus robur
Score  61.2 Score Type  egn
Protein Description  (M=6) PTHR12506 - PROTEIN PHOSPHATASE RELATED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 128  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0013s08490g 1 122 + 122 Gaps:17 52.94 255 78.52 3e-53 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1437550 1 122 + 122 Gaps:14 43.53 448 68.21 2e-52 nucleic acid binding protein putative
blastp_kegg lcl|pop:POPTR_0019s08030g 1 122 + 122 Gaps:18 36.18 445 70.19 3e-51 POPTRDRAFT_249034 zinc finger family protein
blastp_kegg lcl|pmum:103318785 1 122 + 122 Gaps:21 42.53 442 70.21 4e-51 zinc finger CCCH domain-containing protein ZFN-like
blastp_kegg lcl|fve:101311772 1 122 + 122 Gaps:21 44.80 442 66.67 4e-51 zinc finger CCCH domain-containing protein ZFN-like
blastp_kegg lcl|pper:PRUPE_ppa005813mg 1 122 + 122 Gaps:21 42.53 442 70.21 5e-51 hypothetical protein
blastp_kegg lcl|vvi:100254791 1 122 + 122 Gaps:23 42.18 441 71.51 2e-50 zinc finger CCCH domain-containing protein ZFN-like
blastp_kegg lcl|mdm:103419527 1 122 + 122 Gaps:21 44.80 442 66.16 5e-50 zinc finger CCCH domain-containing protein ZFN-like
blastp_kegg lcl|pxb:103930390 1 122 + 122 Gaps:21 35.67 443 71.52 1e-49 zinc finger CCCH domain-containing protein ZFN-like
blastp_kegg lcl|mdm:103423604 1 122 + 122 Gaps:21 35.59 444 70.89 9e-49 zinc finger CCCH domain-containing protein ZFN-like
blastp_uniprot_sprot sp|Q9SWF9|ZFNL_PEA 45 122 + 78 Gaps:1 46.04 417 65.10 1e-46 Zinc finger CCCH domain-containing protein ZFN-like OS Pisum sativum PE 2 SV 1
blastp_uniprot_sprot sp|Q8GXX7|C3H33_ARATH 1 122 + 122 Gaps:31 49.87 397 64.14 2e-41 Zinc finger CCCH domain-containing protein 33 OS Arabidopsis thaliana GN ZFN1 PE 1 SV 1
blastp_uniprot_sprot sp|Q2QT65|C3H66_ORYSJ 37 122 + 86 Gaps:3 42.73 454 58.25 2e-37 Zinc finger CCCH domain-containing protein 66 OS Oryza sativa subsp. japonica GN Os12g0405100 PE 2 SV 1
blastp_uniprot_sprot sp|Q8L7N8|C3H57_ARATH 49 122 + 74 Gaps:2 48.27 375 62.43 3e-36 Zinc finger CCCH domain-containing protein 57 OS Arabidopsis thaliana GN ZFN3 PE 2 SV 2
blastp_uniprot_sprot sp|Q2R4J4|C3H63_ORYSJ 46 122 + 77 Gaps:3 40.77 444 61.88 4e-36 Zinc finger CCCH domain-containing protein 63 OS Oryza sativa subsp. japonica GN Os11g0472000 PE 2 SV 2
blastp_uniprot_sprot sp|Q5JLB5|C3H12_ORYSJ 34 122 + 89 Gaps:3 41.46 439 60.99 3e-34 Zinc finger CCCH domain-containing protein 12 OS Oryza sativa subsp. japonica GN Os01g0917400 PE 2 SV 2
blastp_uniprot_sprot sp|Q84W91|C3H32_ARATH 8 122 + 115 Gaps:12 50.00 468 44.87 1e-20 Zinc finger CCCH domain-containing protein 32 OS Arabidopsis thaliana GN At2g47850 PE 2 SV 2
blastp_uniprot_sprot sp|Q94AD9|C3H3_ARATH 39 122 + 84 Gaps:2 36.14 404 47.95 2e-20 Zinc finger CCCH domain-containing protein 3 OS Arabidopsis thaliana GN At1g04990 PE 2 SV 1
blastp_uniprot_sprot sp|Q6NPN3|C3H58_ARATH 63 122 + 60 Gaps:6 33.12 465 55.19 4e-18 Zinc finger CCCH domain-containing protein 58 OS Arabidopsis thaliana GN At5g18550 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SQU4|C3H34_ARATH 7 122 + 116 Gaps:7 50.00 462 42.86 1e-16 Zinc finger CCCH domain-containing protein 34 OS Arabidopsis thaliana GN At3g06410 PE 2 SV 2
rpsblast_kog gnl|CDD|36890 23 123 + 101 Gaps:2 30.42 332 33.66 1e-08 KOG1677 KOG1677 KOG1677 CCCH-type Zn-finger protein [General function prediction only].

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 70 97 28 SM00356 none zinc finger IPR000571
Phobius 24 28 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
SUPERFAMILY 75 98 24 SSF90229 none none none
Phobius 29 127 99 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 71 97 27 PF00642 none Zinc finger C-x8-C-x5-C-x3-H type (and similar) IPR000571
ProSiteProfiles 70 98 29 PS50103 none Zinc finger C3H1-type profile. IPR000571
Phobius 12 23 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 1 11 11 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 1 28 28 SIGNAL_PEPTIDE none Signal peptide region none
Gene3D 76 96 21 G3DSA:4.10.1000.10 none none IPR000571
PANTHER 49 122 74 PTHR12506 none none none

2 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 29 28
SignalP_GRAM_NEGATIVE 1 29 28

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting