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2014

14 Feb 2014 new tools available in Galaxy

We are pleased to announce new tool integrations in our Galaxy server:

section SnpEff tools

  •     SnpEff (3.4) , Variant effect and annotation

             We currently support two genomes (Grape and Rice). New genomes can be added upon request.
 
 section NGS: Assembly

  •     Mapsembler2 (2.0.5), targeted assembly software

 section NCBI BLAST+

  •     NCBI BLAST+ suite tools (2.2.27+)

            We currently support few databanks. New databanks can be added upon request.
 
 section Gene Ontology Annotation tools

  •     Blast2GO (2.5), Blast results to GO terms

 section NGS: Peak Calling

  •     GeneTrack indexer
  •     Peak predictor

 
 For any questions or bug reports, please contact us at: urgi-support@versailles.inra.fr
 
 Thank you for using URGI Galaxy: https://urgi.versailles.inra.fr/galaxy2


Creation date: 14 Feb 2014