Analysis : 3B assembly
Analysis details
| Name | 3B assembly |
| Analysis type | Sequence assembly |
| Software | Newbler v2.3 |
| Reference genome | 3B v1 |
| Comments | On average 30 Mb produced per run provide 20X coverage excusing the overlap between clones, a peak at 1,7 Mb (based on size of BACs/FPC), real length with overlap is 1,1 MB and therefore overall coverage can be estimated at 30x. About 200 to 400 contigs per assembly, N50= 5 to 10kb. Scaffolds: less than 30, N50> 100 kb. |
Execution details
| Runs | 1 |
| Result file |
3B sequence repository
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More informations
| Project | 3BSEQ |
| Contact | Arnaud COULOUX |