GRS - Genome Report System

Sclerotinia sclerotiorum GRS

Functional annotation

SS1G_14097.1

Gene Identifier

Domain/Motif (Interproscan results)

Localization / Targeting

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	ssl:SS1G_14097	1	422	422	n/a	100.00	422	100.00	0.00	0.0	hypothetical protein K00813 aspartate aminotransferase [EC:2.6.1.1]
	bfu:BC1G_13706	1	422	422	Gaps:17	100.00	439	85.65	5.69	0.0	hypothetical protein K00813 aspartate aminotransferase [EC:2.6.1.1]
	pan:PODANSg463	1	413	413	Gaps:3	92.44	450	71.63	11.78	0.0	hypothetical protein K00813 aspartate aminotransferase [EC:2.6.1.1]
	fgr:FG09739.1	4	413	410	n/a	99.03	414	72.20	10.24	0.0	hypothetical protein K00813 aspartate aminotransferase [EC:2.6.1.1]
	mgr:MGG_04156	6	416	411	Gaps:5	90.15	457	72.09	11.89	1e-180	MG04156.4 hypothetical protein K00813 aspartate aminotransferase [EC:2.6.1.1]
	act:ACLA_068740	1	415	415	n/a	99.76	416	70.12	10.84	1e-178	aspartate transaminase putative K00813 aspartate aminotransferase [EC:2.6.1.1]
	tml:GSTUM_00006350001	1	417	417	Gaps:4	100.00	417	69.30	12.95	1e-175	hypothetical protein K00813 aspartate aminotransferase [EC:2.6.1.1]
	cim:CIMG_07862	9	415	407	Gaps:2	97.15	421	70.17	10.51	1e-175	hypothetical protein K00813 aspartate aminotransferase [EC:2.6.1.1]
	pcs:Pc22g19440	18	417	400	n/a	91.74	436	70.50	11.50	1e-175	Pc22g19440 K00813 aspartate aminotransferase [EC:2.6.1.1]
	ncr:NCU07941	7	416	410	Gaps:6	86.31	482	68.75	11.06	1e-175	aspartate aminotransferase K00813 aspartate aminotransferase [EC:2.6.1.1]
blastp_uniprot_sprot	sp\|P00504\|AATC_CHICK	13	416	404	Gaps:9	98.30	412	50.62	19.75	1e-122	Aspartate aminotransferase cytoplasmic OS Gallus gallus GN GOT1 PE 1 SV 3
	sp\|P13221\|AATC_RAT	14	416	403	Gaps:11	97.82	413	51.73	20.30	1e-120	Aspartate aminotransferase cytoplasmic OS Rattus norvegicus GN Got1 PE 1 SV 3
	sp\|Q5R691\|AATC_PONAB	14	416	403	Gaps:11	97.82	413	51.98	18.56	1e-120	Aspartate aminotransferase cytoplasmic OS Pongo abelii GN GOT1 PE 2 SV 1
	sp\|P00503\|AATC_PIG	14	416	403	Gaps:9	97.82	413	51.49	18.32	1e-120	Aspartate aminotransferase cytoplasmic OS Sus scrofa GN GOT1 PE 1 SV 3
	sp\|P17174\|AATC_HUMAN	14	416	403	Gaps:11	97.82	413	51.73	19.06	1e-120	Aspartate aminotransferase cytoplasmic OS Homo sapiens GN GOT1 PE 1 SV 3
	sp\|Q4R5L1\|AATC_MACFA	14	416	403	Gaps:11	97.82	413	51.73	18.81	1e-119	Aspartate aminotransferase cytoplasmic OS Macaca fascicularis GN GOT1 PE 2 SV 1
	sp\|P08906\|AATC_HORSE	14	416	403	Gaps:11	97.82	413	51.49	19.06	1e-119	Aspartate aminotransferase cytoplasmic OS Equus caballus GN GOT1 PE 1 SV 2
	sp\|A5A6K8\|AATC_PANTR	14	416	403	Gaps:11	97.82	413	51.49	19.31	1e-119	Aspartate aminotransferase cytoplasmic OS Pan troglodytes GN GOT1 PE 2 SV 1
	sp\|P05201\|AATC_MOUSE	14	416	403	Gaps:11	97.82	413	50.99	19.80	1e-119	Aspartate aminotransferase cytoplasmic OS Mus musculus GN Got1 PE 1 SV 2
	sp\|P33097\|AATC_BOVIN	14	416	403	Gaps:9	97.82	413	50.74	18.32	1e-117	Aspartate aminotransferase cytoplasmic OS Bos taurus GN GOT1 PE 1 SV 3
blastp_pdb	1aat_B	13	416	404	Gaps:9	98.54	411	50.62	20.25	1e-123	mol:protein length:411 CYTOSOLIC ASPARTATE AMINOTRANSFERASE
	1aat_A	13	416	404	Gaps:9	98.54	411	50.62	20.25	1e-123	mol:protein length:411 CYTOSOLIC ASPARTATE AMINOTRANSFERASE
	2cst_B	13	416	404	Gaps:9	98.54	411	50.62	19.75	1e-123	mol:protein length:411 ASPARTATE AMINOTRANSFERASE
	2cst_A	13	416	404	Gaps:9	98.54	411	50.62	19.75	1e-123	mol:protein length:411 ASPARTATE AMINOTRANSFERASE
	1ajs_B	14	416	403	Gaps:9	98.06	412	50.99	18.81	1e-120	mol:protein length:412 ASPARTATE AMINOTRANSFERASE
	1ajs_A	14	416	403	Gaps:9	98.06	412	50.99	18.81	1e-120	mol:protein length:412 ASPARTATE AMINOTRANSFERASE
	1ajr_B	14	416	403	Gaps:9	98.06	412	50.99	18.81	1e-120	mol:protein length:412 ASPARTATE AMINOTRANSFERASE
	1ajr_A	14	416	403	Gaps:9	98.06	412	50.99	18.81	1e-120	mol:protein length:412 ASPARTATE AMINOTRANSFERASE
	3ii0_D	22	417	396	Gaps:11	94.08	422	51.64	19.40	1e-119	mol:protein length:422 Aspartate aminotransferase cytoplasmic
	3ii0_C	22	417	396	Gaps:11	94.08	422	51.64	19.40	1e-119	mol:protein length:422 Aspartate aminotransferase cytoplasmic
rpsblast_cdd	gnl\|CDD\|173569	12	415	404	Gaps:5	98.76	404	54.14	15.79	1e-174	PTZ00376 PTZ00376 aspartate aminotransferase Provisional.
	gnl\|CDD\|166038	1	416	416	Gaps:7	96.24	425	52.57	17.36	1e-164	PLN02397 PLN02397 aspartate transaminase.
	gnl\|CDD\|31637	12	412	401	Gaps:7	99.49	396	50.00	17.01	1e-138	COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism].
	gnl\|CDD\|169748	12	413	402	Gaps:7	99.50	397	47.85	14.18	1e-137	PRK09257 PRK09257 aromatic amino acid aminotransferase Provisional.
	gnl\|CDD\|143923	36	408	373	Gaps:47	99.72	351	30.57	13.71	9e-67	pfam00155 Aminotran_1_2 Aminotransferase class I and II.
	gnl\|CDD\|99734	38	400	363	Gaps:50	97.43	350	21.41	12.61	4e-35	cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate which depending on the reaction is the substrate in four kinds of reactions (1) transamination (movement of amino groups) (2) racemization (redistribution of enantiomers) (3) decarboxylation (removing COOH groups) and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha beta and gamma classes based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a b and c Tyrosine Alanine Aromatic-amino-acid Glutamine phenylpyruvate 1-Aminocyclopropane-1-carboxylate synthase Histidinol-phosphate gene products of malY and cobC Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein..
	gnl\|CDD\|30785	8	349	342	Gaps:33	79.64	393	20.45	15.65	1e-09	COG0436 COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism].
rpsblast_kog	gnl\|CDD\|36626	12	418	407	Gaps:6	98.29	410	54.34	15.63	1e-150	KOG1412 KOG1412 KOG1412 Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism].
rpsblast_kog	gnl\|CDD\|36625	14	415	402	Gaps:6	92.74	427	51.01	18.94	1e-133	KOG1411 KOG1411 KOG1411 Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism].

Other analysis

Functional Gbrowse

Ortholog