GRS - Genome Report System

Sclerotinia sclerotiorum GRS

Functional annotation

SS1G_13647.1

Gene Identifier

Domain/Motif (Interproscan results)

Localization / Targeting

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	ssl:SS1G_13647	18	92	75	n/a	81.52	92	100.00	0.00	2e-36	hypothetical protein K02921 large subunit ribosomal protein L37Ae
	fgr:FG06757.1	18	92	75	n/a	81.52	92	89.33	4.00	2e-32	hypothetical protein K02921 large subunit ribosomal protein L37Ae
	afm:AFUA_2G16880	18	92	75	n/a	81.52	92	89.33	5.33	2e-32	60S ribosomal protein L37a K02921 large subunit ribosomal protein L37Ae
	nfi:NFIA_092210	18	92	75	n/a	84.27	89	89.33	5.33	3e-32	60S ribosomal protein L37a K02921 large subunit ribosomal protein L37Ae
	act:ACLA_075820	18	92	75	n/a	81.52	92	88.00	6.67	4e-32	60S ribosomal protein L37a K02921 large subunit ribosomal protein L37Ae
	afv:AFLA_002560	18	92	75	n/a	81.52	92	86.67	8.00	8e-32	60S ribosomal protein L37a K02921 large subunit ribosomal protein L37Ae
	pcs:Pc21g19530	18	92	75	n/a	81.52	92	86.67	6.67	2e-31	Pc21g19530 K02921 large subunit ribosomal protein L37Ae
	tml:GSTUM_00002514001	18	92	75	n/a	81.52	92	88.00	5.33	5e-31	hypothetical protein K02921 large subunit ribosomal protein L37Ae
	ang:An04g08980	18	92	75	n/a	81.52	92	84.00	9.33	5e-31	hypothetical protein K02921 large subunit ribosomal protein L37Ae
	mgr:MGG_06571	18	92	75	n/a	81.52	92	82.67	10.67	8e-31	MG06571.4 hypothetical protein K02921 large subunit ribosomal protein L37Ae
blastp_uniprot_sprot	sp\|Q751L1\|RL43_ASHGO	18	91	74	n/a	80.43	92	71.62	14.86	2e-26	60S ribosomal protein L43 OS Ashbya gossypii GN RPL43 PE 3 SV 1
	sp\|P49631\|RL43_YEAST	18	91	74	n/a	80.43	92	72.97	12.16	1e-25	60S ribosomal protein L43 OS Saccharomyces cerevisiae GN RPL43A PE 1 SV 2
	sp\|Q6FRG6\|RL43_CANGA	18	91	74	n/a	80.43	92	70.27	16.22	1e-25	60S ribosomal protein L43 OS Candida glabrata GN RPL43 PE 3 SV 1
	sp\|Q54UG4\|RL37A_DICDI	18	91	74	n/a	81.32	91	66.22	13.51	4e-24	60S ribosomal protein L37a OS Dictyostelium discoideum GN rpl37A PE 3 SV 1
	sp\|O61598\|RL37A_OSTOS	18	91	74	n/a	81.32	91	68.92	12.16	5e-24	60S ribosomal protein L37a OS Ostertagia ostertagi GN rpl-37a PE 3 SV 3
	sp\|Q9ZRS8\|RL37A_PSEMZ	18	91	74	n/a	80.43	92	64.86	14.86	6e-24	60S ribosomal protein L37a OS Pseudotsuga menziesii GN RPL37A PE 3 SV 1
	sp\|Q9VMU4\|RL37A_DROME	18	91	74	n/a	80.43	92	67.57	14.86	2e-23	60S ribosomal protein L37a OS Drosophila melanogaster GN RpL37A PE 1 SV 3
	sp\|Q9XHE4\|RL37A_GOSHI	18	91	74	n/a	80.43	92	64.86	14.86	3e-23	60S ribosomal protein L37a OS Gossypium hirsutum GN RPL37A PE 3 SV 1
	sp\|Q5QM99\|RL37A_ORYSJ	18	91	74	n/a	80.43	92	64.86	13.51	4e-23	60S ribosomal protein L37a OS Oryza sativa subsp. japonica GN Os01g0679700 PE 1 SV 1
	sp\|O61462\|RL37A_CRYST	18	91	74	n/a	80.43	92	66.22	13.51	4e-23	60S ribosomal protein L37a OS Cryptochiton stelleri GN RPL37A PE 3 SV 3
blastp_pdb	1s1i_9	18	91	74	n/a	81.32	91	72.97	12.16	2e-26	mol:protein length:91 60S ribosomal protein L43
	2zkr_z	18	91	74	n/a	80.43	92	62.16	18.92	1e-22	mol:protein length:92 60S Ribosomal protein L37a
	3jyw_9	18	82	65	n/a	90.28	72	73.85	10.77	4e-22	mol:protein length:72 60S ribosomal protein L43
	1ysh_D	18	82	65	n/a	89.04	73	64.62	13.85	5e-20	mol:protein length:73 ribosomal protein L37a
	1yjw_Z	18	84	67	n/a	80.72	83	32.84	16.42	1e-07	mol:protein length:83 50S ribosomal protein L37Ae
	1yjn_Z	18	84	67	n/a	80.72	83	32.84	16.42	1e-07	mol:protein length:83 50S ribosomal protein L37Ae
	1yj9_Z	18	84	67	n/a	80.72	83	32.84	16.42	1e-07	mol:protein length:83 50S ribosomal protein L37Ae
	1yit_Z	18	84	67	n/a	80.72	83	32.84	16.42	1e-07	mol:protein length:83 50S ribosomal protein L37Ae
	1yij_Z	18	84	67	n/a	80.72	83	32.84	16.42	1e-07	mol:protein length:83 50S ribosomal protein L37Ae
	1yi2_Z	18	84	67	n/a	80.72	83	32.84	16.42	1e-07	mol:protein length:83 50S ribosomal protein L37Ae
rpsblast_cdd	gnl\|CDD\|145111	2	91	90	n/a	100.00	90	66.67	13.33	1e-33	pfam01780 Ribosomal_L37ae Ribosomal L37ae protein family. This ribosomal protein is found in archaebacteria and eukaryotes. It contains four conserved cysteine residues that may bind to zinc.
	gnl\|CDD\|173494	1	88	88	n/a	97.78	90	72.73	13.64	9e-33	PTZ00255 PTZ00255 60S ribosomal protein L37a Provisional.
	gnl\|CDD\|161801	3	91	89	n/a	97.80	91	61.80	12.36	7e-23	TIGR00280 L37a ribosomal protein L37a. This model finds eukaryotic ribosomal protein L37a and its archaeal orthologs. The nomeclature is tricky because eukaryotes have proteins called both L37 and L37a.
	gnl\|CDD\|32180	4	88	85	n/a	95.51	89	54.12	20.00	1e-19	COG1997 RPL43A Ribosomal protein L37AE/L43A [Translation ribosomal structure and biogenesis].
	gnl\|CDD\|167655	1	88	88	Gaps:1	98.89	90	44.94	13.48	4e-19	PRK03976 rpl37ae 50S ribosomal protein L37Ae Reviewed.
rpsblast_kog	gnl\|CDD\|35623	1	92	92	n/a	100.00	92	76.09	8.70	1e-28	KOG0402 KOG0402 KOG0402 60S ribosomal protein L37 [Translation ribosomal structure and biogenesis].

Other analysis

Functional Gbrowse

Ortholog