GRS - Genome Report System

Sclerotinia sclerotiorum GRS

Functional annotation

SS1G_09817.1

Gene Identifier

Domain/Motif (Interproscan results)

Localization / Targeting

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	ssl:SS1G_06410	1	1533	1533	n/a	100.00	1533	92.82	0.00	0.0	hypothetical protein
	ssl:SS1G_05813	1	1533	1533	n/a	100.00	1533	92.82	0.00	0.0	hypothetical protein
	ssl:SS1G_09528	1	1533	1533	n/a	100.00	1533	92.82	0.00	0.0	hypothetical protein
	ssl:SS1G_12788	1	1533	1533	n/a	100.00	1533	92.82	0.00	0.0	hypothetical protein
	ssl:SS1G_09817	1	1533	1533	n/a	100.00	1533	92.82	0.00	0.0	hypothetical protein
	ssl:SS1G_12370	1	1298	1298	Gaps:137	100.00	1161	90.01	0.60	0.0	hypothetical protein
	ssl:SS1G_05621	1	1533	1533	n/a	100.00	1213	91.76	0.08	0.0	hypothetical protein
	ssl:SS1G_09208	1	1533	1533	n/a	100.00	1213	91.76	0.08	0.0	hypothetical protein
	ssl:SS1G_01804	1	1533	1533	n/a	100.00	1213	91.76	0.08	0.0	hypothetical protein
	ssl:SS1G_13153	1	1533	1533	n/a	100.00	1213	91.76	0.08	0.0	hypothetical protein
blastp_uniprot_sprot	sp\|P10978\|POLX_TOBAC	377	1524	1148	Gaps:89	70.63	1328	29.85	18.76	1e-70	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS Nicotiana tabacum PE 2 SV 1
	sp\|P04146\|COPIA_DROME	360	1525	1166	Gaps:82	63.73	1409	27.95	19.49	5e-44	Copia protein OS Drosophila melanogaster GN GIP PE 1 SV 3
	sp\|Q12273\|YO11B_YEAST	342	1511	1170	Gaps:98	55.67	1755	24.46	19.55	1e-25	Transposon Ty1-OL Gag-Pol polyprotein OS Saccharomyces cerevisiae GN TY1B-OL PE 3 SV 1
	sp\|P0C2I7\|YL14B_YEAST	342	1511	1170	Gaps:88	55.67	1755	23.75	20.27	1e-25	Transposon Ty1-LR4 Gag-Pol polyprotein OS Saccharomyces cerevisiae GN TY1B-LR4 PE 3 SV 1
	sp\|P0C2I3\|YD15B_YEAST	1031	1511	481	Gaps:47	28.15	1755	24.90	21.86	1e-25	Transposon Ty1-DR6 Gag-Pol polyprotein OS Saccharomyces cerevisiae GN TY1B-DR6 PE 3 SV 1
	sp\|Q12269\|YG12B_YEAST	342	1511	1170	Gaps:88	53.50	1755	24.39	19.49	1e-25	Transposon Ty1-GR2 Gag-Pol polyprotein OS Saccharomyces cerevisiae GN TY1B-GR2 PE 3 SV 3
	sp\|Q12414\|YP11B_YEAST	342	1511	1170	Gaps:98	55.67	1755	24.56	19.45	2e-25	Transposon Ty1-PL Gag-Pol polyprotein OS Saccharomyces cerevisiae GN TY1B-PL PE 3 SV 1
	sp\|P0C2I5\|YL12B_YEAST	342	1511	1170	Gaps:98	55.67	1755	24.56	19.34	2e-25	Transposon Ty1-LR2 Gag-Pol polyprotein OS Saccharomyces cerevisiae GN TY1B-LR2 PE 3 SV 1
	sp\|Q03612\|YE11B_YEAST	342	1511	1170	Gaps:98	55.67	1755	24.46	19.55	2e-25	Transposon Ty1-ER1 Gag-Pol polyprotein OS Saccharomyces cerevisiae GN TY1B-ER1 PE 1 SV 1
	sp\|Q03434\|YM12B_YEAST	342	1511	1170	Gaps:94	55.67	1755	24.36	19.45	2e-25	Transposon Ty1-ML2 Gag-Pol polyprotein OS Saccharomyces cerevisiae GN TY1B-ML2 PE 3 SV 2
blastp_pdb	no results
rpsblast_cdd	gnl\|CDD\|149018	1046	1285	240	Gaps:25	97.97	246	34.44	21.58	3e-48	pfam07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase). A reverse transcriptase gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. Reverse transcriptases occur in a variety of mobile elements including retrotransposons retroviruses group II introns bacterial msDNAs hepadnaviruses and caulimoviruses. This Pfam entry includes reverse transcriptases not recognized by the pfam00078 model.
rpsblast_kog	no results

Other analysis

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