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Sclerotinia sclerotiorum GRS

Functional annotation

SS1G_07870.1

Gene Identifier

Domain/Motif (Interproscan results)

Localization / Targeting

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	ssl:SS1G_07870	54	700	647	n/a	92.43	700	87.64	0.00	0.0	hypothetical protein
	bfu:BC1G_07801	159	528	370	n/a	96.86	382	87.30	2.43	0.0	hypothetical protein
	fgr:FG05895.1	55	530	476	Gaps:47	48.75	999	39.22	16.84	2e-76	hypothetical protein
	mgr:MGG_04019	56	533	478	Gaps:42	68.46	745	35.10	16.47	1e-75	MG04019.4 hypothetical protein
	afm:AFUA_5G02550	54	504	451	Gaps:48	74.80	627	34.33	15.78	2e-64	RNA polymerase III transcription factor subunit putative
	ncr:NCU03787	54	535	482	Gaps:93	65.01	866	31.62	15.81	9e-64	hypothetical protein
	ani:AN7997.2	54	511	458	Gaps:52	79.07	602	35.92	15.76	3e-63	hypothetical protein
	nfi:NFIA_039530	54	504	451	Gaps:51	74.92	630	33.69	15.68	2e-62	RNA polymerase III transcription factor subunit putative
	cim:CIMG_06463	55	508	454	Gaps:79	82.63	616	34.18	13.56	2e-60	hypothetical protein
	ang:An02g10220	54	502	449	Gaps:57	75.16	644	33.68	16.53	2e-59	hypothetical protein
blastp_uniprot_sprot	sp\|O14229\|SFC1_SCHPO	191	499	309	Gaps:28	62.50	456	29.12	23.51	1e-24	Transcription factor tau subunit sfc1 OS Schizosaccharomyces pombe GN sfc1 PE 1 SV 2
	sp\|Q9Y5Q8\|TF3C5_HUMAN	55	386	332	Gaps:51	59.92	519	28.94	19.61	3e-16	General transcription factor 3C polypeptide 5 OS Homo sapiens GN GTF3C5 PE 1 SV 2
	sp\|Q8R2T8\|TF3C5_MOUSE	290	386	97	Gaps:9	19.62	520	33.33	21.57	6e-10	General transcription factor 3C polypeptide 5 OS Mus musculus GN Gtf3c5 PE 2 SV 2
	sp\|P32367\|TFC1_YEAST	126	386	261	Gaps:52	42.99	649	24.37	14.70	3e-09	Transcription factor tau 95 kDa subunit OS Saccharomyces cerevisiae GN TFC1 PE 1 SV 1
	sp\|Q54GS8\|TF3C5_DICDI	309	394	86	Gaps:4	9.71	865	35.71	16.67	5e-07	General transcription factor 3C polypeptide 5 OS Dictyostelium discoideum GN gtf3c5 PE 3 SV 1
blastp_pdb	no results
rpsblast_cdd	gnl\|CDD\|150412	65	385	321	Gaps:24	100.00	307	43.65	14.33	5e-89	pfam09734 Tau95 RNA polymerase III transcription factor (TF)IIIC subunit. TFIIIC1 is a multisubunit DNA binding factor that serves as a dynamic platform for assembly of pre-initiation complexes on class III genes. This entry represents the tau 95 subunit which holds a key position in TFIIIC exerting both upstream and downstream influence on the TFIIIC-DNA complex by rendering the complex more stable. Once bound to tDNA-intragenic promoter elements TFIIIC directs the assembly of TFIIIB on the DNA which in turn recruits the RNA polymerase III (pol III) and activates multiple rounds of transcription.
rpsblast_kog	gnl\|CDD\|37684	60	480	421	Gaps:62	76.65	484	25.61	16.71	1e-28	KOG2473 KOG2473 KOG2473 RNA polymerase III transcription factor (TF)IIIC subunit [Transcription].

Functional Gbrowse

Ortholog

Broad institute

Genome Report System - copyright INRA 2011