GRS - Genome Report System

Sclerotinia sclerotiorum GRS

Functional annotation

SS1G_05600.1

Gene Identifier

Domain/Motif (Interproscan results)

Localization / Targeting

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	ssl:SS1G_05600	1	633	633	n/a	78.29	645	76.24	0.00	0.0	hypothetical protein
	bfu:BC1G_15063	1	633	633	n/a	71.80	656	73.25	3.18	1e-166	hypothetical protein
	pan:PODANSg4434	1	254	254	Gaps:10	67.20	378	64.96	12.20	2e-90	hypothetical protein
	fgr:FG08656.1	1	248	248	Gaps:10	39.93	611	66.39	13.93	1e-89	hypothetical protein
	ncr:NCU07438	1	251	251	Gaps:6	38.84	636	63.97	9.72	8e-86	WASP-like pretein las17p
	mgr:MGCH7_ch7g555	1	596	596	Gaps:32	45.44	669	65.46	9.87	5e-84	MGG_ch7g555 hypothetical protein
	mgr:MGG_02802	1	596	596	Gaps:32	46.48	654	65.46	9.87	6e-84	MG02802.4 hypothetical protein
	aor:AO090120000140	1	355	355	Gaps:35	53.53	665	50.00	6.46	9e-73	actin regulatory protein (Wiskott-Aldrich syndrome protein)
	cim:CIMG_05779	1	246	246	Gaps:38	39.31	641	60.71	10.71	4e-72	hypothetical protein
	pno:SNOG_07847	1	251	251	Gaps:34	42.30	617	57.47	13.79	5e-71	hypothetical protein
blastp_uniprot_sprot	sp\|Q12446\|LAS17_YEAST	4	136	133	Gaps:1	20.85	633	59.85	17.42	1e-43	Proline-rich protein LAS17 OS Saccharomyces cerevisiae GN LAS17 PE 1 SV 1
	sp\|O36027\|WSP1_SCHPO	3	242	240	Gaps:41	37.11	574	44.60	19.25	3e-41	Wiskott-Aldrich syndrome protein homolog 1 OS Schizosaccharomyces pombe GN wsp1 PE 1 SV 3
	sp\|P42768\|WASP_HUMAN	3	126	124	Gaps:12	25.50	502	32.03	21.09	4e-12	Wiskott-Aldrich syndrome protein OS Homo sapiens GN WAS PE 1 SV 4
	sp\|Q95107\|WASL_BOVIN	4	144	141	Gaps:8	27.52	505	30.22	23.02	5e-12	Neural Wiskott-Aldrich syndrome protein OS Bos taurus GN WASL PE 2 SV 1
	sp\|Q91YD9\|WASL_MOUSE	4	144	141	Gaps:8	27.74	501	30.22	23.02	7e-12	Neural Wiskott-Aldrich syndrome protein OS Mus musculus GN Wasl PE 1 SV 1
	sp\|O08816\|WASL_RAT	4	144	141	Gaps:8	27.74	501	30.22	23.02	7e-12	Neural Wiskott-Aldrich syndrome protein OS Rattus norvegicus GN Wasl PE 1 SV 2
	sp\|O00401\|WASL_HUMAN	4	144	141	Gaps:8	27.52	505	30.22	23.02	1e-11	Neural Wiskott-Aldrich syndrome protein OS Homo sapiens GN WASL PE 1 SV 2
	sp\|P70315\|WASP_MOUSE	3	126	124	Gaps:12	24.62	520	29.69	21.09	6e-10	Wiskott-Aldrich syndrome protein homolog OS Mus musculus GN Was PE 1 SV 1
blastp_pdb	2ifs_A	28	131	104	Gaps:8	61.54	169	34.62	22.12	2e-10	mol:protein length:169 Wiskott-Aldrich Syndrome Protien ineracting p
blastp_pdb	1mke_A	28	131	104	Gaps:8	68.42	152	34.62	22.12	2e-10	mol:protein length:152 Fusion protein consisting of Wiskott-Aldrich
rpsblast_cdd	gnl\|CDD\|176281	19	126	108	Gaps:3	100.00	105	48.57	16.19	1e-46	cd01205 WASP WASP-type EVH1 domain. WASP-type EVH1 domain. Wiskott-Aldrich syndrome (WAS) is an X-linked recessive disease characterized by eczema immunodeficiency and thrombocytopenia. The majority of patients with WAS or a milder version of the disorder X-linked thrombocytopenia (XLT) have point mutations in the EVH1 domain of WASP (Wiskott-Aldrich syndrome protein). WASP is an actin regulatory protein consisting of an N-terminal EVH1 domain a basic region a GTP binding domain a proline rich region and a WH2 acidic region. Yeast members lack the GTP binding domain. WASP binds a 25 residue proline rich motif from the WASP Interacting Protein (WIP) via its N-terminal EVH1 domain.
	gnl\|CDD\|176274	22	126	105	Gaps:3	100.00	104	41.35	15.38	1e-34	cd00837 EVH1 EVH1 (Enabled Vasp-Homology) or WASP Homology (WH1) domain. EVH1 (Enabled Vasp-Homology) or WASP Homology (WH1) domain. The EVH1 domain binds to other proteins at proline rich sequences in either FPPPP or PPXXF motifs. It is found in the cytoskeletal reorganization proteins Enabled VASP and WASP and in the synaptic scaffolding protein Homer. It has a PH-like fold despite having minimal sequence similarity to PH or PTB domains.
	gnl\|CDD\|144235	14	126	113	Gaps:4	100.00	111	38.74	14.41	3e-29	pfam00568 WH1 WH1 domain. WASp Homology domain 1 (WH1) domain. WASP is the protein that is defective in Wiskott-Aldrich syndrome (WAS). The majority of point mutations occur within the amino- terminal WH1 domain. The metabotropic glutamate receptors mGluR1alpha and mGluR5 bind a protein called homer which is a WH1 domain homologue. A subset of WH1 domains has been termed a "EVH1" domain and appear to bind a polyproline motif.
	gnl\|CDD\|128737	18	126	109	Gaps:3	100.00	106	37.74	16.04	7e-29	smart00461 WH1 WASP homology region 1. Region of the Wiskott-Aldrich syndrome protein (WASp) that contains point mutations in the majority of patients with WAS. Unknown function. Ena-like WH1 domains bind polyproline-containing peptides and that Homer contains a WH1 domain.
	gnl\|CDD\|165506	158	611	454	Gaps:185	27.23	3151	42.42	9.56	1e-21	PHA03247 PHA03247 large tegument protein UL36 Provisional.
	gnl\|CDD\|165504	239	627	389	Gaps:156	21.65	3243	39.60	10.40	2e-21	PHA03245 PHA03245 large tegument protein UL36 Provisional.
	gnl\|CDD\|168152	267	563	297	Gaps:107	29.66	698	52.17	12.08	1e-15	PRK05648 PRK05648 DNA polymerase III subunits gamma and tau Reviewed.
	gnl\|CDD\|169088	253	644	392	Gaps:84	41.06	794	61.66	11.04	2e-14	PRK07764 PRK07764 DNA polymerase III subunits gamma and tau Validated.
	gnl\|CDD\|150441	260	559	300	Gaps:76	31.19	792	41.70	13.36	2e-14	pfam09770 PAT1 Topoisomerase II-associated protein PAT1. Members of this family are necessary for accurate chromosome transmission during cell division.
	gnl\|CDD\|147015	359	570	212	Gaps:38	43.91	312	40.15	12.41	9e-14	pfam04652 DUF605 Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region.
rpsblast_kog	gnl\|CDD\|37135	240	559	320	Gaps:283	13.07	1102	69.44	9.72	9e-25	KOG1924 KOG1924 KOG1924 RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms Cytoskeleton].
	gnl\|CDD\|38875	3	644	642	Gaps:94	96.31	569	31.75	12.59	2e-21	KOG3671 KOG3671 KOG3671 Actin regulatory protein (Wiskott-Aldrich syndrome protein) [Signal transduction mechanisms Cytoskeleton].
	gnl\|CDD\|37195	266	567	302	Gaps:83	26.91	1007	51.29	11.81	7e-16	KOG1984 KOG1984 KOG1984 Vesicle coat complex COPII subunit SFB3 [Intracellular trafficking secretion and vesicular transport].
	gnl\|CDD\|35528	243	638	396	Gaps:124	26.69	1049	52.14	14.29	8e-15	KOG0307 KOG0307 KOG0307 Vesicle coat complex COPII subunit SEC31 [Intracellular trafficking secretion and vesicular transport].
	gnl\|CDD\|35786	260	556	297	Gaps:136	21.02	1080	40.53	10.57	6e-12	KOG0566 KOG0566 KOG0566 Inositol-1 4 5-triphosphate 5-phosphatase (synaptojanin) INP51/INP52/INP53 family [Intracellular trafficking secretion and vesicular transport].
	gnl\|CDD\|35612	243	557	315	Gaps:102	19.10	1958	34.49	11.50	2e-11	KOG0391 KOG0391 KOG0391 SNF2 family DNA-dependent ATPase [General function prediction only].
	gnl\|CDD\|37196	281	567	287	Gaps:111	20.18	887	53.07	16.76	6e-11	KOG1985 KOG1985 KOG1985 Vesicle coat complex COPII subunit SEC24/subunit SFB2 [Intracellular trafficking secretion and vesicular transport].
	gnl\|CDD\|35354	379	555	177	Gaps:20	19.91	894	43.26	5.62	1e-10	KOG0132 KOG0132 KOG0132 RNA polymerase II C-terminal domain-binding protein RA4 contains RPR and RRM domains [RNA processing and modification Transcription].
	gnl\|CDD\|37041	375	557	183	n/a	35.33	518	24.59	5.46	2e-10	KOG1830 KOG1830 KOG1830 Wiskott Aldrich syndrome proteins [Cytoskeleton].
	gnl\|CDD\|37134	417	570	154	Gaps:42	11.33	830	55.32	8.51	5e-10	KOG1923 KOG1923 KOG1923 Rac1 GTPase effector FRL [Signal transduction mechanisms Cytoskeleton].

Other analysis

Functional Gbrowse

Ortholog