GRS - Genome Report System

Sclerotinia sclerotiorum GRS

Functional annotation

SS1G_03723.1

Gene Identifier

Domain/Motif (Interproscan results)

Localization / Targeting

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	ssl:SS1G_03723	1	609	609	n/a	100.00	609	97.54	0.00	0.0	hypothetical protein
	ssl:SS1G_14517	1	418	418	n/a	29.58	1413	94.02	2.39	0.0	hypothetical protein
	bfu:BC1G_15284	1	535	535	Gaps:3	32.88	1618	73.87	12.22	0.0	hypothetical protein
	bfu:BC1G_12842	1	535	535	Gaps:3	32.88	1618	73.50	12.22	0.0	hypothetical protein
	bfu:BC1G_15972	1	535	535	Gaps:3	32.90	1617	72.37	12.78	0.0	hypothetical protein
	ssl:SS1G_05465	1	396	396	Gaps:39	26.68	1338	94.40	2.52	0.0	hypothetical protein
	ssl:SS1G_00932	1	534	534	Gaps:13	74.65	706	55.41	18.41	1e-170	hypothetical protein
	bfu:BC1G_13999	1	363	363	Gaps:3	55.13	653	71.94	12.22	1e-154	hypothetical protein
	ssl:SS1G_04937	1	286	286	n/a	100.00	286	89.16	4.55	1e-150	hypothetical protein
	bfu:BC1G_16375	69	438	370	Gaps:42	99.70	329	73.48	13.72	1e-140	hypothetical protein
blastp_uniprot_sprot	sp\|Q9UR07\|RTF23_SCHPO	1	462	462	Gaps:36	33.61	1333	31.70	17.86	7e-48	Retrotransposable element Tf2 155 kDa protein type 3 OS Schizosaccharomyces pombe GN Tf2-11 PE 4 SV 1
	sp\|Q05654\|RTF21_SCHPO	1	462	462	Gaps:36	33.61	1333	31.70	17.86	8e-48	Retrotransposable element Tf2 155 kDa protein type 1 OS Schizosaccharomyces pombe GN Tf2-1 PE 2 SV 1
	sp\|Q9C0R2\|RTF22_SCHPO	1	462	462	Gaps:36	33.61	1333	31.70	17.86	9e-48	Retrotransposable element Tf2 155 kDa protein type 2 OS Schizosaccharomyces pombe GN Tf2-7 PE 2 SV 1
	sp\|Q7LHG5\|YI31B_YEAST	1	462	462	Gaps:32	30.57	1498	30.13	17.03	4e-40	Transposon Ty3-I Gag-Pol polyprotein OS Saccharomyces cerevisiae GN TY3B-I PE 3 SV 2
	sp\|Q99315\|YG31B_YEAST	1	462	462	Gaps:32	29.61	1547	30.13	16.81	1e-39	Transposon Ty3-G Gag-Pol polyprotein OS Saccharomyces cerevisiae GN TY3B-G PE 1 SV 3
	sp\|P27401\|POL_SFV3L	93	370	278	Gaps:24	23.62	1143	29.26	18.89	1e-18	Pro-Pol polyprotein OS Simian foamy virus type 3 (strain LK3) GN pol PE 3 SV 2
	sp\|Q87040\|POL_SFVCP	19	370	352	Gaps:28	30.02	1146	25.87	18.31	8e-17	Pro-Pol polyprotein OS Simian foamy virus (isolate chimpanzee) GN pol PE 3 SV 1
	sp\|P14350\|POL_FOAMV	19	391	373	Gaps:40	30.53	1143	28.94	17.48	9e-17	Pro-Pol polyprotein OS Human spumaretrovirus GN pol PE 1 SV 2
	sp\|P10394\|POL4_DROME	121	436	316	Gaps:29	24.98	1237	26.54	16.83	1e-15	Retrovirus-related Pol polyprotein from transposon 412 OS Drosophila melanogaster GN POL PE 4 SV 1
	sp\|P23074\|POL_SFV1	127	370	244	Gaps:15	20.45	1149	26.81	20.85	2e-15	Pro-Pol polyprotein OS Simian foamy virus type 1 GN pol PE 1 SV 3
blastp_pdb	3l2w_B	105	391	287	Gaps:28	65.57	395	30.50	18.92	2e-18	mol:protein length:395 Integrase
	3l2w_A	105	391	287	Gaps:28	65.57	395	30.50	18.92	2e-18	mol:protein length:395 Integrase
	3l2v_B	105	391	287	Gaps:28	65.57	395	30.50	18.92	2e-18	mol:protein length:395 Integrase
	3l2v_A	105	391	287	Gaps:28	65.57	395	30.50	18.92	2e-18	mol:protein length:395 Integrase
	3l2u_B	105	391	287	Gaps:28	65.57	395	30.50	18.92	2e-18	mol:protein length:395 Integrase
	3l2u_A	105	391	287	Gaps:28	65.57	395	30.50	18.92	2e-18	mol:protein length:395 Integrase
	3l2t_B	105	391	287	Gaps:28	65.57	395	30.50	18.92	2e-18	mol:protein length:395 Integrase
	3l2t_A	105	391	287	Gaps:28	65.57	395	30.50	18.92	2e-18	mol:protein length:395 Integrase
	3l2s_B	105	391	287	Gaps:28	65.57	395	30.50	18.92	2e-18	mol:protein length:395 Integrase
	3l2s_A	105	391	287	Gaps:28	65.57	395	30.50	18.92	2e-18	mol:protein length:395 Integrase
rpsblast_cdd	gnl\|CDD\|144312	201	303	103	Gaps:1	86.67	120	25.96	15.38	5e-10	pfam00665 rve Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyses the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.
	gnl\|CDD\|144103	485	534	50	Gaps:3	100.00	53	41.51	18.87	2e-08	pfam00385 Chromo 'chromo' (CHRromatin Organisation MOdifier) domain.
	gnl\|CDD\|128593	485	536	52	Gaps:2	98.18	55	38.89	29.63	2e-07	smart00298 CHROMO Chromatin organization modifier domain.
rpsblast_kog	gnl\|CDD\|37122	480	577	98	Gaps:2	37.04	270	31.00	13.00	5e-09	KOG1911 KOG1911 KOG1911 Heterochromatin-associated protein HP1 and related CHROMO domain proteins [Chromatin structure and dynamics].

Other analysis

Functional Gbrowse

Ortholog

Analysis	Species	Link
First Blast Hit	Botrytis cinerea B0510	BC1G_15284.1
First Blast Hit	Botrytis cinerea T4	BofuT4_P146340.1
bdbh (Bi-Directional Best Hit)	Botrytis cinerea T4	BofuT4_P146340.1
orthomcl	Aspergillus niger	An05g02090
	Botrytis cinerea B0510	BC1G_04408.1
	Botrytis cinerea B0510	BC1G_04888.1
	Botrytis cinerea B0510	BC1G_04889.1
	Botrytis cinerea B0510	BC1G_06254.1
	Botrytis cinerea B0510	BC1G_07532.1
	Botrytis cinerea B0510	BC1G_08449.1
	Botrytis cinerea B0510	BC1G_08572.1
	Botrytis cinerea B0510	BC1G_09712.1
	Botrytis cinerea B0510	BC1G_12842.1
	Botrytis cinerea B0510	BC1G_13225.1
	Botrytis cinerea B0510	BC1G_13999.1
	Botrytis cinerea B0510	BC1G_15283.1
	Botrytis cinerea B0510	BC1G_15284.1
	Botrytis cinerea B0510	BC1G_15972.1
	Botrytis cinerea B0510	BC1G_16148.1
	Botrytis cinerea B0510	BC1G_16168.1
	Botrytis cinerea B0510	BC1G_16375.1
	Botrytis cinerea T4	BofuT4_P045690.1
	Botrytis cinerea T4	BofuT4_P070970.1
	Botrytis cinerea T4	BofuT4_P074480.1
	Botrytis cinerea T4	BofuT4_P074490.1
	Botrytis cinerea T4	BofuT4_P100810.1
	Botrytis cinerea T4	BofuT4_P106380.1
	Botrytis cinerea T4	BofuT4_P125550.1
	Botrytis cinerea T4	BofuT4_P146340.1
	Magnaporthe oryzae	MGG_15841T0
	Magnaporthe oryzae	MGG_15917T0
	Magnaporthe oryzae	MGG_15918T0
	Magnaporthe oryzae	MGG_15987T0
	Magnaporthe oryzae	MGG_16063T0
	Magnaporthe oryzae	MGG_16167T0
	Magnaporthe oryzae	MGG_16168T0
	Magnaporthe oryzae	MGG_16177T0
	Magnaporthe oryzae	MGG_16180T0
	Magnaporthe oryzae	MGG_16400T0
	Magnaporthe oryzae	MGG_16473T0
	Magnaporthe oryzae	MGG_16535T0
	Magnaporthe oryzae	MGG_16555T0
	Magnaporthe oryzae	MGG_16572T0
	Magnaporthe oryzae	MGG_16972T0
	Magnaporthe oryzae	MGG_16984T0
	Magnaporthe oryzae	MGG_17020T0
	Magnaporthe oryzae	MGG_17284T0
	Magnaporthe oryzae	MGG_17307T0
	Magnaporthe oryzae	MGG_17553T0
	Magnaporthe oryzae	MGG_17588T0
	Magnaporthe oryzae	MGG_17613T0
	Magnaporthe oryzae	MGG_17620T0
	Magnaporthe oryzae	MGG_17654T0
	Magnaporthe oryzae	MGG_17776T0
	Magnaporthe oryzae	MGG_17847T0
	Pyrenophora teres	PTTT_08129.1
	Pyrenophora teres	PTTT_17789.1
	Pyrenophora teres	PTTT_20125.1
	Sclerotinia sclerotiorum	SS1G_00931.1
	Sclerotinia sclerotiorum	SS1G_00932.1
	Sclerotinia sclerotiorum	SS1G_01156.1
	Sclerotinia sclerotiorum	SS1G_02147.1
	Sclerotinia sclerotiorum	SS1G_03204.1
	Sclerotinia sclerotiorum	SS1G_03379.1
	Sclerotinia sclerotiorum	SS1G_03380.1
	Sclerotinia sclerotiorum	SS1G_03534.1
	Sclerotinia sclerotiorum	SS1G_03724.1
Sclerotinia sclerotiorum	SS1G_03737.1
Sclerotinia sclerotiorum	SS1G_04259.1
Sclerotinia sclerotiorum	SS1G_04893.1
Sclerotinia sclerotiorum	SS1G_04936.1
Sclerotinia sclerotiorum	SS1G_05465.1
Sclerotinia sclerotiorum	SS1G_05702.1
Sclerotinia sclerotiorum	SS1G_06437.1
Sclerotinia sclerotiorum	SS1G_06497.1
Sclerotinia sclerotiorum	SS1G_07081.1
Sclerotinia sclerotiorum	SS1G_08660.1
Sclerotinia sclerotiorum	SS1G_08962.1
Sclerotinia sclerotiorum	SS1G_09531.1
Sclerotinia sclerotiorum	SS1G_09805.1
Sclerotinia sclerotiorum	SS1G_09826.1
Sclerotinia sclerotiorum	SS1G_10427.1
Sclerotinia sclerotiorum	SS1G_10428.1
Sclerotinia sclerotiorum	SS1G_14025.1
Sclerotinia sclerotiorum	SS1G_14517.1