GRS - Genome Report System

Sclerotinia sclerotiorum GRS

Functional annotation

SS1G_01216.1

Gene Identifier

Domain/Motif (Interproscan results)

Localization / Targeting

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	ssl:SS1G_01216	1	398	398	n/a	100.00	398	90.70	0.00	0.0	hypothetical protein K01224 arabinogalactan endo-1 4-beta-galactosidase [EC:3.2.1.89]
	bfu:BC1G_03991	33	398	366	n/a	100.00	366	79.51	6.83	1e-174	hypothetical protein K01224 arabinogalactan endo-1 4-beta-galactosidase [EC:3.2.1.89]
	pan:PODANSg4144	42	398	357	Gaps:29	94.59	351	38.25	19.88	7e-57	hypothetical protein K01224 arabinogalactan endo-1 4-beta-galactosidase [EC:3.2.1.89]
	pno:SNOG_11649	74	386	313	Gaps:12	86.08	352	39.27	16.83	8e-55	hypothetical protein K01224 arabinogalactan endo-1 4-beta-galactosidase [EC:3.2.1.89]
	nfi:NFIA_017780	43	375	333	Gaps:23	89.33	356	38.68	19.18	2e-53	glycosyl hydrolase family 53 protein K01224 arabinogalactan endo-1 4-beta-galactosidase [EC:3.2.1.89]
	afm:AFUA_1G06910	43	375	333	Gaps:23	83.46	381	38.05	19.50	3e-53	arabinogalactan endo-1 4-beta-galactosidase GalA (EC:3.2.1.89) K01224 arabinogalactan endo-1 4-beta-galactosidase [EC:3.2.1.89]
	ncr:NCU11198	40	370	331	Gaps:21	93.18	337	39.49	16.24	1e-52	arabinogalactan endo-1 4-beta-galactosidase K01224 arabinogalactan endo-1 4-beta-galactosidase [EC:3.2.1.89]
	ssl:SS1G_11585	47	397	351	Gaps:28	93.70	349	39.45	18.04	7e-52	hypothetical protein K01224 arabinogalactan endo-1 4-beta-galactosidase [EC:3.2.1.89]
	ang:An18g05940	47	379	333	Gaps:22	90.57	350	36.59	18.61	1e-49	hypothetical protein K01224 arabinogalactan endo-1 4-beta-galactosidase [EC:3.2.1.89]
	fgr:FG11048.1	65	377	313	Gaps:17	85.14	350	37.92	16.11	2e-49	hypothetical protein K01224 arabinogalactan endo-1 4-beta-galactosidase [EC:3.2.1.89]
blastp_uniprot_sprot	sp\|B0XPR3\|GANA_ASPFC	43	375	333	Gaps:23	89.33	356	38.05	19.18	1e-54	Probable arabinogalactan endo-1 4-beta-galactosidase A OS Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN galA PE 3 SV 2
	sp\|A1D3T4\|GANA_NEOFI	43	375	333	Gaps:23	89.33	356	38.68	19.18	2e-54	Probable arabinogalactan endo-1 4-beta-galactosidase A OS Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN galA PE 3 SV 1
	sp\|Q4WJ80\|GANA_ASPFU	43	375	333	Gaps:23	89.33	356	38.05	19.18	3e-54	Probable arabinogalactan endo-1 4-beta-galactosidase A OS Aspergillus fumigatus GN galA PE 3 SV 2
	sp\|P83691\|GANA_HUMIN	47	391	345	Gaps:19	98.80	332	37.20	18.60	5e-53	Arabinogalactan endo-1 4-beta-galactosidase OS Humicola insolens PE 1 SV 1
	sp\|P48842\|GANA_ASPAC	74	375	302	Gaps:22	82.29	350	40.97	17.36	5e-53	Arabinogalactan endo-1 4-beta-galactosidase OS Aspergillus aculeatus GN gal1 PE 1 SV 1
	sp\|P83692\|GANA_THIHE	47	391	345	Gaps:21	98.80	332	36.89	19.51	5e-52	Arabinogalactan endo-1 4-beta-galactosidase OS Thielavia heterothallica PE 1 SV 1
	sp\|A2RB93\|GANA_ASPNC	47	379	333	Gaps:22	90.57	350	36.59	18.61	1e-50	Probable arabinogalactan endo-1 4-beta-galactosidase A OS Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN galA PE 3 SV 1
	sp\|Q9Y7F8\|GANA_ASPTU	47	375	329	Gaps:22	89.43	350	36.74	18.85	1e-50	Probable arabinogalactan endo-1 4-beta-galactosidase A OS Aspergillus tubingensis GN galA PE 2 SV 1
	sp\|Q8X168\|GANA_ASPNG	47	379	333	Gaps:22	90.57	350	36.59	18.61	1e-50	Arabinogalactan endo-1 4-beta-galactosidase A OS Aspergillus niger GN galA PE 1 SV 1
	sp\|Q0CTQ7\|GANA_ASPTN	47	375	329	Gaps:25	89.97	349	37.90	17.83	1e-50	Probable arabinogalactan endo-1 4-beta-galactosidase A OS Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN galA PE 3 SV 1
blastp_pdb	1fob_A	74	375	302	Gaps:22	86.23	334	40.97	17.36	8e-54	mol:protein length:334 BETA-1 4-GALACTANASE
	1fhl_A	74	375	302	Gaps:22	86.23	334	40.97	17.36	8e-54	mol:protein length:334 BETA-1 4-GALACTANASE
	1hjq_A	47	391	345	Gaps:19	98.80	332	37.20	18.60	1e-53	mol:protein length:332 BETA-1 4-GALACTANASE
	1hju_D	47	391	345	Gaps:21	98.80	332	36.89	19.51	1e-52	mol:protein length:332 BETA-1 4-GALACTANASE
	1hju_C	47	391	345	Gaps:21	98.80	332	36.89	19.51	1e-52	mol:protein length:332 BETA-1 4-GALACTANASE
	1hju_B	47	391	345	Gaps:21	98.80	332	36.89	19.51	1e-52	mol:protein length:332 BETA-1 4-GALACTANASE
	1hju_A	47	391	345	Gaps:21	98.80	332	36.89	19.51	1e-52	mol:protein length:332 BETA-1 4-GALACTANASE
	1hjs_D	47	391	345	Gaps:21	98.80	332	36.89	19.51	1e-52	mol:protein length:332 BETA-1 4-GALACTANASE
	1hjs_C	47	391	345	Gaps:21	98.80	332	36.89	19.51	1e-52	mol:protein length:332 BETA-1 4-GALACTANASE
	1hjs_B	47	391	345	Gaps:21	98.80	332	36.89	19.51	1e-52	mol:protein length:332 BETA-1 4-GALACTANASE
rpsblast_cdd	gnl\|CDD\|116359	47	386	340	Gaps:35	99.10	332	42.25	13.68	5e-77	pfam07745 Glyco_hydro_53 Glycosyl hydrolase family 53. This domain belongs to family 53 of the glycosyl hydrolase classification. These enzymes are enzymes are endo-1 4- beta-galactanases (EC:3.2.1.89). The structure of this domain is known and has a TIM barrel fold.
rpsblast_cdd	gnl\|CDD\|33657	46	361	316	Gaps:37	76.18	403	41.37	12.05	1e-52	COG3867 COG3867 Arabinogalactan endo-1 4-beta-galactosidase [Carbohydrate transport and metabolism].
rpsblast_kog	no results

Other analysis

Functional Gbrowse

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