GRS - Genome Report System

Botrytis cinerea T4 GRS

Functional annotation

BofuT4_P122680.1

Gene Identifier

DbXrefs

Domain/Motif (Interproscan results)

Localization / Targeting

Predicted function

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	bfu:BC1G_08583	1	411	411	n/a	100.00	411	99.76	0.24	0.0	hypothetical protein
	ssl:SS1G_01380	1	411	411	n/a	100.00	411	78.59	9.98	0.0	hypothetical protein
	mgr:MGG_04240	8	388	381	Gaps:9	93.98	415	44.87	18.21	1e-91	MG04240.4 hypothetical protein K00480 salicylate hydroxylase [EC:1.14.13.1]
	ang:An12g05970	6	407	402	Gaps:21	99.52	415	43.83	16.95	1e-90	hypothetical protein
	ppl:POSPLDRAFT_102649	4	407	404	Gaps:31	98.27	404	40.30	16.37	3e-63	hypothetical protein
	bja:blr4977	7	371	365	Gaps:29	89.45	398	32.58	15.45	3e-33	putative monooxygenase (EC:1.14.13.-) K00480 salicylate hydroxylase [EC:1.14.13.1]
	cre:CHLREDRAFT_205738	8	335	328	Gaps:49	73.87	486	31.48	15.32	3e-32	flavoprotein monooxygenase
	bbr:BB4482	8	383	376	Gaps:37	89.41	406	29.20	21.21	3e-31	putative hydroxylase
	bpa:BPP4009	8	383	376	Gaps:37	89.41	406	28.93	21.21	1e-30	putative hydroxylase
	mgi:Mflv_2621	5	369	365	Gaps:35	87.63	388	33.53	16.47	1e-30	monooxygenase FAD-binding
blastp_uniprot_sprot	sp\|Q3S4B7\|3HBH_POLNA	27	400	374	Gaps:29	89.75	400	27.86	18.94	7e-26	3-hydroxybenzoate 6-hydroxylase OS Polaromonas naphthalenivorans (strain CJ2) GN nagX PE 1 SV 1
	sp\|Q5EXK1\|3HBH_KLEOX	22	390	369	Gaps:27	88.66	397	27.27	20.17	7e-25	3-hydroxybenzoate 6-hydroxylase OS Klebsiella oxytoca GN mhbM PE 1 SV 1
	sp\|Q9F131\|3HBH1_PSEAC	5	326	322	Gaps:31	79.95	394	27.30	16.19	1e-20	3-hydroxybenzoate 6-hydroxylase 1 OS Pseudomonas alcaligenes GN xlnD PE 1 SV 1
	sp\|Q53552\|NHG2_PSEPU	8	357	350	Gaps:40	81.84	435	26.12	17.42	2e-20	Salicylate hydroxylase OS Pseudomonas putida GN nahG PE 4 SV 1
	sp\|P86491\|6HN3M_PSEFL	27	383	357	Gaps:36	87.53	385	27.30	17.51	3e-18	6-hydroxynicotinate 3-monooxygenase OS Pseudomonas fluorescens PE 1 SV 1
	sp\|P93236\|ABA2_SOLLC	8	335	328	Gaps:34	48.43	669	28.40	15.12	3e-17	Zeaxanthin epoxidase chloroplastic OS Solanum lycopersicum PE 2 SV 1
	sp\|P23262\|NHG1_PSEPU	22	357	336	Gaps:42	79.72	434	25.43	17.05	2e-16	Salicylate hydroxylase OS Pseudomonas putida GN nahG PE 1 SV 4
	sp\|Q40412\|ABA2_NICPL	8	333	326	Gaps:34	48.57	663	27.33	15.84	2e-16	Zeaxanthin epoxidase chloroplastic OS Nicotiana plumbaginifolia GN ABA2 PE 1 SV 1
	sp\|O81360\|ABA2_PRUAR	8	333	326	Gaps:30	48.71	661	28.26	17.70	4e-16	Zeaxanthin epoxidase chloroplastic OS Prunus armeniaca PE 2 SV 1
	sp\|Q0QFQ1\|3HBH2_PSEAC	116	368	253	Gaps:17	74.38	320	28.57	17.23	4e-16	3-hydroxybenzoate 6-hydroxylase 2 OS Pseudomonas alcaligenes GN hbzD PE 2 SV 1
blastp_pdb	2x3n_A	9	321	313	Gaps:32	75.94	399	27.39	18.15	1e-13	mol:protein length:399 PROBABLE FAD-DEPENDENT MONOOXYGENASE
rpsblast_cdd	gnl\|CDD\|169249	8	395	388	Gaps:31	94.19	396	28.95	17.43	1e-35	PRK08163 PRK08163 salicylate hydroxylase Provisional.
	gnl\|CDD\|30999	5	370	366	Gaps:29	90.18	387	24.64	14.90	4e-35	COG0654 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion].
	gnl\|CDD\|168999	8	372	365	Gaps:63	88.62	413	28.69	13.93	4e-27	PRK07538 PRK07538 hypothetical protein Provisional.
	gnl\|CDD\|168661	8	388	381	Gaps:70	95.17	373	26.20	17.75	6e-27	PRK06753 PRK06753 hypothetical protein Provisional.
	gnl\|CDD\|168703	7	371	365	Gaps:36	92.53	375	28.53	13.26	1e-24	PRK06847 PRK06847 hypothetical protein Provisional.
	gnl\|CDD\|132263	8	369	362	Gaps:40	89.37	414	27.03	16.22	1e-23	TIGR03219 salicylate_mono salicylate 1-monooxygenase. Members of this protein family are salicylate 1-monooxygenase also called salicylate hydroxylase. This enzyme converts salicylate to catechol which is a common intermediate in the degradation of a number of aromatic compounds (phenol toluene benzoate etc.). The gene for this protein may occur in catechol degradation genes such as those of the meta-cleavage pathway.
	gnl\|CDD\|168569	10	358	349	Gaps:59	85.50	400	25.44	20.18	1e-20	PRK06475 PRK06475 salicylate hydroxylase Provisional.
	gnl\|CDD\|166568	8	365	358	Gaps:42	58.69	610	27.93	16.76	1e-18	PLN02927 PLN02927 antheraxanthin epoxidase/zeaxanthin epoxidase.
	gnl\|CDD\|168875	8	378	371	Gaps:71	97.94	388	26.58	10.53	1e-15	PRK07236 PRK07236 hypothetical protein Provisional.
	gnl\|CDD\|144912	9	326	318	Gaps:67	89.11	349	22.83	16.40	1e-15	pfam01494 FAD_binding_3 FAD binding domain. This domain is involved in FAD binding in a number of enzymes.
rpsblast_kog	gnl\|CDD\|37825	6	339	334	Gaps:26	78.57	420	26.97	14.55	4e-33	KOG2614 KOG2614 KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases [Energy production and conversion General function prediction only].
rpsblast_kog	gnl\|CDD\|36512	9	383	375	Gaps:77	71.51	509	25.00	14.01	4e-09	KOG1298 KOG1298 KOG1298 Squalene monooxygenase [Lipid transport and metabolism].

Other analysis

Functional Gbrowse

Structural Gbrowse

Genome Mapping at gene locus

Analysis	Hit name	RefStart	RefEnd	Hit length	Hit identity	Hit coverage	eValue	Hit description
RepeatMasker_ALL_Repbase	no results
TRF	no results
REPET	no results
sim4_Bot_allest	B1BC_045_008_E03	424842	425585	658	96.96	100.00	n/a	BC ATCC 58025 (G3)
	PD0ABA8YE22FM1	424792	425523	634	100.00	100.00	n/a	BT4 young mycelium library
	PD0ABA39YL21FM1	424970	425587	566	100.00	100.00	n/a	BT4 young mycelium library
	PD0ABA40YL21FM1	425106	425531	374	99.20	100.00	n/a	BT4 young mycelium library
	PD0ACA19YJ24FM1	424388	425233	747	100.00	100.00	n/a	BT4 mycelium - pH stress library
	B1BC_045_037_B08	424132	424726	542	99.82	100.00	n/a	BC ATCC 58025 (G3)
	AL112584	424138	424333	196	100.00	100.00	n/a	BT4 Mycelium - nitrate starvation library
	PD0ABA8YE22NM1r	424111	424925	762	100.00	100.00	n/a	BT4 young mycelium library
	PD0ABA20YI09FM1	424098	424277	180	100.00	100.00	n/a	BT4 young mycelium library
	B1BC_045_012_F07	424833	425624	702	97.72	100.00	n/a	BC ATCC 58025 (G3)
	PD0ABA20YH23FM1	424859	425624	668	100.00	100.00	n/a	BT4 young mycelium library
	PD0ABA18YG18FM1	424815	425609	697	99.57	100.00	n/a	BT4 young mycelium library
	PD0ABA17YM21FM1	424882	425625	646	99.85	100.00	n/a	BT4 young mycelium library
	PD0ACA23YL20FM1	424776	425611	738	99.86	100.00	n/a	BT4 mycelium - pH stress library
sim4_Bot_allest4_clctg	CL_bt4_SupSuperContig_8_105_1_bt4ctg_1695_004.Contig1_v5	424098	425625	1379	99.85	100.00	n/a	all_lib_clone_nr:13
sim4_Ss_allest	no results
blastx_uniprot_sprot	no results
blastx_uniprot_trembl	A4R5J0	424276	425569	415	45.24	93.73	n/a	Putative uncharacterized protein - Magnaporthe grisea (Rice blast fungus) (Pyricularia grisea)
	A2QZS2	424219	425298	415	41.59	81.69	n/a	Contig An12c0170 complete genome. precursor - Aspergillus niger
	Q46NY6	424533	425587	403	31.06	72.70	n/a	3-hydroxybenzoate 6-hydroxylase - Ralstonia eutropha (strain JMP134) (Alcaligenes eutrophus)
blastx_FNG30_prot	SS1G_01380.1	424207	425590	411	78.59	100.00	n/a	sclerotinia_sclerotiorum hypothetical protein translation 412 aa
	MGG_04240.5	424276	425569	415	45.24	93.73	n/a	magnaporthe_grisea hypothetical protein translation 416 aa
	jgi:Triree:9248	424533	425217	212	47.62	99.06	n/a	Trichoderma reesei
	jgi:Phchr1:29638:gwh2.15.81.1	424321	425569	364	42.73	90.66	n/a	Phanerochaete chrysosporium
	jgi:Phchr1:7979:fgenesh1_pg.C_	424261	425283	404	41.13	69.80	n/a	Phanerochaete chrysosporium
	jgi:Phchr1:7965:fgenesh1_pg.C_	424276	425232	396	41.76	65.91	n/a	Phanerochaete chrysosporium
	jgi:Phchr1:140831:e_gww2.15.79	424264	425283	396	39.93	70.20	n/a	Phanerochaete chrysosporium
	jgi:Phchr1:130811:e_gwh2.15.87	424288	425283	397	40.00	69.27	n/a	Phanerochaete chrysosporium
	jgi:Phchr1:140680:e_gww2.15.86	424276	425232	396	42.08	65.40	n/a	Phanerochaete chrysosporium
	jgi:Phchr1:7961:fgenesh1_pg.C_	424267	425283	395	37.81	71.65	n/a	Phanerochaete chrysosporium
sim4_B0510_genes	BC1G_08583.1	424204	425590	1236	99.68	100.00	n/a	n/a
sim4_SS_genes	SS1G_01380.1	424204	425572	1236	83.84	68.61	n/a	n/a
sim4_SS_genes	SS1G_01380.1	424204	425572	1236	83.84	68.61	n/a	n/a
blastn_b0510_supercontig	B0510_supercontig_1.51	417794	425385	255760	99.14	n/a	n/a	n/a
blastn_b0510_supercontig	B0510_supercontig_1.51	425384	426586	255760	97.01	n/a	n/a	n/a
blastn_SS_supercontig	SS_supercontig_1.2	424522	424655	2719746	88.06	n/a	n/a	n/a
	SS_supercontig_1.2	425423	425590	2719746	85.12	n/a	n/a	n/a
	SS_supercontig_1.2	424967	425087	2719746	85.12	n/a	n/a	n/a
blat_oligo	botrytisP00130625	425312	425371	60	n/a	n/a	n/a	array_gene:BofuT4_P122680_1 . max_over_threshold:161.97 . min_over_threshold:1.01 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:1
	botrytisP00130626	425096	425155	60	n/a	n/a	n/a	array_gene:BofuT4_P122680_1 . max_over_threshold:113.25 . min_over_threshold:1.27 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:1
	botrytisP00130627	425001	425060	60	n/a	n/a	n/a	array_gene:BofuT4_P122680_1 . max_over_threshold:170.11 . min_over_threshold:3.3 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:1
	botrytisP00130628	424983	425042	60	n/a	n/a	n/a	array_gene:BofuT4_P122680_1 . max_over_threshold:189.85 . min_over_threshold:4.36 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:1
	botrytisP00130629	424784	424843	60	n/a	n/a	n/a	array_gene:BofuT4_P122680_1 . max_over_threshold:159.28 . min_over_threshold:2.43 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:1
	botrytisP00130630	424603	424662	60	n/a	n/a	n/a	array_gene:BofuT4_P122680_1 . max_over_threshold:104.4 . min_over_threshold:0.78 . percent_hyb_over_threshold:96.42 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:1
	botrytisP00130631	424432	424544	60	n/a	n/a	n/a	array_gene:BofuT4_P122680_1 . max_over_threshold:172.39 . min_over_threshold:0.82 . percent_hyb_over_threshold:92.85 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:1
	botrytisP00130632	424336	424395	60	n/a	n/a	n/a	array_gene:BofuT4_P122680_1 . max_over_threshold:138.71 . min_over_threshold:0.62 . percent_hyb_over_threshold:92.85 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:1
	botrytisP00130633	424208	424267	60	n/a	n/a	n/a	array_gene:BofuT4_P122680_1 . max_over_threshold:66.29 . min_over_threshold:0.5 . percent_hyb_over_threshold:78.57 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0

Current manual annotation

Ortholog