GRS - Genome Report System

Botrytis cinerea T4 GRS

Functional annotation

BofuT4_P120290.1

Gene Identifier

DbXrefs

Domain/Motif (Interproscan results)

Localization / Targeting

Predicted function

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	bfu:BC1G_03534	1	153	153	n/a	100.00	153	88.24	0.00	4e-70	hypothetical protein K11599 proteasome maturation protein
	ssl:SS1G_03676	1	153	153	n/a	100.00	153	76.47	6.54	3e-59	hypothetical protein K11599 proteasome maturation protein
	fgr:FG09733.1	2	151	150	Gaps:2	97.37	152	60.81	12.84	1e-44	hypothetical protein K11599 proteasome maturation protein
	mgr:MGG_04147	1	151	151	Gaps:11	100.00	162	55.56	11.11	7e-42	MG04147.4 hypothetical protein K11599 proteasome maturation protein
	ncr:NCU05227	1	152	152	Gaps:22	99.42	171	49.41	13.53	7e-36	hypothetical protein K11599 proteasome maturation protein
	pan:PODANSg3794	1	151	151	Gaps:1	100.00	152	52.63	12.50	1e-35	hypothetical protein K11599 proteasome maturation protein
	nfi:NFIA_076490	1	153	153	Gaps:16	81.86	204	47.31	14.97	3e-32	20S proteasome maturation protein Ump1 putative K11599 proteasome maturation protein
	ure:UREG_00707	1	153	153	Gaps:10	100.00	163	46.01	17.18	9e-32	hypothetical protein K11599 proteasome maturation protein
	afm:AFUA_5G10740	2	153	152	Gaps:16	81.77	203	46.99	14.46	2e-31	20S proteasome maturation protein Ump1 K11599 proteasome maturation protein
	cim:CIMG_00716	1	153	153	Gaps:9	100.00	162	44.44	16.05	5e-31	hypothetical protein K11599 proteasome maturation protein
blastp_uniprot_sprot	sp\|P38293\|UMP1_YEAST	3	149	147	Gaps:19	98.65	148	34.25	19.18	4e-14	Proteasome maturation factor UMP1 OS Saccharomyces cerevisiae GN UMP1 PE 1 SV 1
blastp_uniprot_sprot	sp\|O74416\|UMP1_SCHPO	3	98	96	Gaps:17	61.24	129	37.97	24.05	3e-08	Probable proteasome maturation factor ump1 OS Schizosaccharomyces pombe GN SPCC14G10.03c PE 2 SV 1
blastp_pdb	no results
rpsblast_cdd	gnl\|CDD\|114091	18	148	131	Gaps:9	96.92	130	33.33	15.08	3e-18	pfam05348 UMP1 Proteasome maturation factor UMP1. UMP1 is a short-lived chaperone present in the precursor form of the 20S proteasome and absent in the mature complex. UMP1 is required for the correct assembly and enzymatic activation of the proteasome. UMP1 seems to be degraded by the proteasome upon its formation.
rpsblast_kog	gnl\|CDD\|38271	22	153	132	Gaps:7	95.62	137	29.77	18.32	8e-15	KOG3061 KOG3061 KOG3061 Proteasome maturation factor [Posttranslational modification protein turnover chaperones].

Other analysis

Functional Gbrowse

Structural Gbrowse

Genome Mapping at gene locus

Analysis	Hit name	RefStart	RefEnd	Hit length	Hit identity	Hit coverage	eValue	Hit description
RepeatMasker_ALL_Repbase	no results
TRF	no results
REPET	no results
sim4_Bot_allest	BcA1_3759_K04	109500	109830	222	95.95	100.00	n/a	BC A1 mycelium
	YCGA_536195	109780	110484	540	99.81	100.00	n/a	Botrytis cinerea HortResearch libraries
	BcA1_3466_I11	109757	110669	747	98.93	100.00	n/a	BC A1 mycelium
	PD0ACA6YH06FM1	109954	110417	298	100.00	100.00	n/a	BT4 mycelium - pH stress library
	YCOA_578439	109527	110407	608	99.51	100.00	n/a	Botrytis cinerea HortResearch libraries
	B3BC_116_210_C02	109557	110597	772	97.93	100.00	n/a	B0510 Germinated spores on hydrophobic surfaces library
	BcA1_3471_J24	109520	110498	704	99.72	100.00	n/a	BC A1 mycelium
	BcA1_3759_I16	109548	110539	716	99.58	100.00	n/a	BC A1 mycelium
	PD0AGA11YD24CM1	109483	110463	707	100.00	100.00	n/a	BT4 mycelium - different stresses library
sim4_Bot_allest4_clctg	CL_bt4_SuperContig_379_1_bt4ctg_1673_013.Contig1_v5	109483	110669	916	99.13	100.00	n/a	all_lib_clone_nr:7
sim4_Ss_allest	G786P549FD4.T0	104047	112955	839	84.68	52.92	n/a	Ss ESTs grown as mycelia at neutral pH
blastx_uniprot_sprot	no results
blastx_uniprot_trembl	A4R584	109755	110087	162	60.66	75.31	n/a	Putative uncharacterized protein - Magnaporthe grisea (Rice blast fungus) (Pyricularia grisea)
	Q2H370	109755	110078	160	59.26	67.50	n/a	Putative uncharacterized protein - Chaetomium globosum (Soil fungus)
	Q7S8I1	109755	110075	171	63.03	69.59	n/a	Putative uncharacterized protein - Neurospora crassa
	A6QU95	109758	110072	158	56.07	67.72	n/a	Putative uncharacterized protein - Ajellomyces capsulata (strain NAm1) (Histoplasma capsulatum)
	Q4WV42	109674	110084	203	47.95	71.92	n/a	20S proteasome maturation protein Ump1 putative - Aspergillus fumigatus (Sartorya fumigata)
	A2R3D7	109755	110084	168	52.46	72.62	n/a	Contig An14c0130 complete genome - Aspergillus niger
	A1DEB2	109692	110084	204	47.52	69.12	n/a	20S proteasome maturation protein Ump1 putative - Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181) (Aspergillus fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
	Q1E9P7	109755	110069	162	52.25	68.52	n/a	Putative uncharacterized protein - Coccidioides immitis
blastx_FNG30_prot	SS1G_03676.1	109755	110087	153	83.78	72.55	n/a	sclerotinia_sclerotiorum hypothetical protein translation 154 aa
	jgi:Triree:33117	109755	110087	151	62.73	72.85	n/a	Trichoderma reesei
	MGG_04147.5	109755	110087	162	60.66	75.31	n/a	magnaporthe_grisea hypothetical protein translation 163 aa
	FG09733.1	109752	110087	152	63.64	72.37	n/a	fusarium_graminearum hypothetical protein 153 aa
	CHG03776.1	109755	110078	160	59.26	67.50	n/a	Chaetomium globosum hypothetical protein translation 161 aa
	NCU05227.2	109755	110075	171	63.03	69.59	n/a	Neurospora crassa hypothetical protein translation 172 aa
	gi:70997667:ref:XP_753572.1:	109767	110084	164	54.05	67.68	n/a	Aspergillus fumigatus Af293 hypothetical protein Afu5g10740
	CIMG_00716.2	109755	110069	162	52.25	68.52	n/a	Coccidioides immitis hypothetical protein translation 163 aa
	AN4731	109755	110084	166	52.07	72.89	n/a	Aspergillus nidulans AN4731.3 conserved hypothetical protein translation 167 aa
	SNU07175.1	109746	110069	163	55.96	66.87	n/a	Stagonospora nodorum hypothetical protein translation
sim4_B0510_genes	BC1G_03534.1	109753	110379	462	99.57	100.00	n/a	n/a
sim4_SS_genes	SS1G_03676.1	109810	110378	462	87.22	49.13	n/a	n/a
blastn_b0510_supercontig	B0510_supercontig_1.13	106457	110570	463386	99.76	n/a	n/a	n/a
blastn_SS_supercontig	SS_supercontig_1.4	109752	110062	2341823	80.06	n/a	n/a	n/a
blat_oligo	botrytisP00128747	109933	109992	60	n/a	n/a	n/a	array_gene:BofuT4_P120290_1 . max_over_threshold:102.66 . min_over_threshold:9.11 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00128748	109953	110012	60	n/a	n/a	n/a	array_gene:BofuT4_P120290_1 . max_over_threshold:82.98 . min_over_threshold:8.65 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00128749	109963	110022	60	n/a	n/a	n/a	array_gene:BofuT4_P120290_1 . max_over_threshold:56.67 . min_over_threshold:5.38 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00128751	109968	110027	60	n/a	n/a	n/a	array_gene:BofuT4_P120290_1 . max_over_threshold:78.89 . min_over_threshold:5.37 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00128752	109974	110033	60	n/a	n/a	n/a	array_gene:BofuT4_P120290_1 . max_over_threshold:67.92 . min_over_threshold:4.9 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00128753	109980	110039	60	n/a	n/a	n/a	array_gene:BofuT4_P120290_1 . max_over_threshold:92.06 . min_over_threshold:7.66 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00128754	109986	110045	60	n/a	n/a	n/a	array_gene:BofuT4_P120290_1 . max_over_threshold:87.3 . min_over_threshold:9.36 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00128755	110020	110079	60	n/a	n/a	n/a	array_gene:BofuT4_P120290_1 . max_over_threshold:110.84 . min_over_threshold:17.66 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00128756	110249	110308	60	n/a	n/a	n/a	array_gene:BofuT4_P120290_1 . max_over_threshold:109.15 . min_over_threshold:13.42 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0

Current manual annotation

Ortholog