GRS - Genome Report System

Botrytis cinerea T4 GRS

Functional annotation

BofuT4_P088120.1

Gene Identifier

DbXrefs

Domain/Motif (Interproscan results)

Localization / Targeting

Predicted function

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	bfu:BC1G_06897	1	1057	1057	n/a	100.00	1057	96.12	0.19	0.0	hypothetical protein
	mgr:MGG_05890	6	1056	1051	Gaps:45	98.47	1046	56.31	15.05	0.0	MG05890.4 hypothetical protein K01190 beta-galactosidase [EC:3.2.1.23]
	nfi:NFIA_072410	6	1055	1050	Gaps:27	98.86	1055	55.99	14.48	0.0	beta-galactosidase
	afm:AFUA_5G14550	6	1055	1050	Gaps:27	98.86	1055	55.70	14.67	0.0	beta-galactosidase K01190 beta-galactosidase [EC:3.2.1.23]
	fgr:FG03269.1	2	1055	1054	Gaps:42	98.38	1049	54.17	14.53	0.0	hypothetical protein
	ani:AN3201.2	11	1050	1040	Gaps:62	98.06	1030	54.75	15.64	0.0	hypothetical protein K01190 beta-galactosidase [EC:3.2.1.23]
	fgr:FG07689.1	11	1009	999	Gaps:44	97.28	994	54.60	14.68	0.0	hypothetical protein
	pcs:Pc22g14540	6	1057	1052	Gaps:43	98.29	1053	49.18	17.00	0.0	Pc22g14540
	pan:PODANSg09772	2	1052	1051	Gaps:88	96.83	1073	51.68	13.96	0.0	hypothetical protein
	dha:DEHA2G24860g	7	1052	1046	Gaps:70	98.04	1022	45.11	17.37	0.0	DEHA2G24860p
blastp_uniprot_sprot	sp\|P00723\|BGAL_KLULA	11	1050	1040	Gaps:96	98.34	1025	40.97	15.58	0.0	Beta-galactosidase OS Kluyveromyces lactis GN LAC4 PE 3 SV 2
	sp\|P06864\|BGA2_ECOLI	20	1052	1033	Gaps:89	93.98	1030	36.47	18.70	1e-167	Evolved beta-galactosidase subunit alpha OS Escherichia coli (strain K12) GN ebgA PE 1 SV 4
	sp\|A4W7D2\|BGAL_ENT38	92	1054	963	Gaps:103	91.44	1028	36.38	17.66	1e-154	Beta-galactosidase OS Enterobacter sp. (strain 638) GN lacZ PE 3 SV 1
	sp\|P81650\|BGAL_PSEHA	86	1056	971	Gaps:96	91.92	1039	35.60	18.64	1e-154	Beta-galactosidase OS Pseudoalteromonas haloplanktis GN lacZ PE 1 SV 2
	sp\|B1LIM9\|BGAL_ECOSM	12	1052	1041	Gaps:127	97.66	1024	35.50	17.80	1e-153	Beta-galactosidase OS Escherichia coli (strain SMS-3-5 / SECEC) GN lacZ PE 3 SV 1
	sp\|Q7MG04\|BGAL_VIBVY	68	1053	986	Gaps:104	93.89	1031	35.74	19.21	1e-153	Beta-galactosidase OS Vibrio vulnificus (strain YJ016) GN lacZ PE 3 SV 1
	sp\|Q6LL68\|BGAL_PHOPR	87	1053	967	Gaps:100	92.14	1030	36.25	18.12	1e-153	Beta-galactosidase OS Photobacterium profundum GN lacZ PE 3 SV 1
	sp\|A9MQ82\|BGAL_SALAR	32	1053	1022	Gaps:113	94.73	1025	36.77	16.89	1e-153	Beta-galactosidase OS Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN lacZ PE 3 SV 2
	sp\|A3FEW8\|BGAL_ENTAG	92	1054	963	Gaps:103	91.44	1028	36.28	17.66	1e-153	Beta-galactosidase OS Enterobacter agglomerans GN lacZ PE 1 SV 2
	sp\|Q8D4H3\|BGAL_VIBVU	68	1052	985	Gaps:109	93.80	1032	35.33	19.83	1e-153	Beta-galactosidase OS Vibrio vulnificus GN lacZ PE 3 SV 2
blastp_pdb	1yq2_F	7	1050	1044	Gaps:138	98.63	1024	37.52	14.95	1e-159	mol:protein length:1024 beta-galactosidase
	1yq2_E	7	1050	1044	Gaps:138	98.63	1024	37.52	14.95	1e-159	mol:protein length:1024 beta-galactosidase
	1yq2_D	7	1050	1044	Gaps:138	98.63	1024	37.52	14.95	1e-159	mol:protein length:1024 beta-galactosidase
	1yq2_C	7	1050	1044	Gaps:138	98.63	1024	37.52	14.95	1e-159	mol:protein length:1024 beta-galactosidase
	1yq2_B	7	1050	1044	Gaps:138	98.63	1024	37.52	14.95	1e-159	mol:protein length:1024 beta-galactosidase
	1yq2_A	7	1050	1044	Gaps:138	98.63	1024	37.52	14.95	1e-159	mol:protein length:1024 beta-galactosidase
	1px4_D	15	1052	1038	Gaps:118	96.19	1023	36.18	17.48	1e-149	mol:protein length:1023 beta-galactosidase
	1px4_C	15	1052	1038	Gaps:118	96.19	1023	36.18	17.48	1e-149	mol:protein length:1023 beta-galactosidase
	1px4_B	15	1052	1038	Gaps:118	96.19	1023	36.18	17.48	1e-149	mol:protein length:1023 beta-galactosidase
	1px4_A	15	1052	1038	Gaps:118	96.19	1023	36.18	17.48	1e-149	mol:protein length:1023 beta-galactosidase
rpsblast_cdd	gnl\|CDD\|170375	16	1050	1035	Gaps:100	95.44	1030	36.11	19.23	0.0	PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha Reviewed.
	gnl\|CDD\|169942	12	1052	1041	Gaps:156	97.66	1027	37.89	15.95	0.0	PRK09525 lacZ beta-D-galactosidase Reviewed.
	gnl\|CDD\|33061	81	940	860	Gaps:93	95.67	808	34.67	15.65	1e-128	COG3250 LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
	gnl\|CDD\|145804	335	645	311	Gaps:30	99.33	297	45.76	13.56	3e-98	pfam02836 Glyco_hydro_2_C Glycosyl hydrolases family 2 TIM barrel domain. This family contains beta-galactosidase beta-mannosidase and beta-glucuronidase activities.
	gnl\|CDD\|111779	773	1053	281	Gaps:19	100.00	274	32.48	18.25	3e-54	pfam02929 Bgal_small_N Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.
	gnl\|CDD\|145805	30	225	196	Gaps:41	97.48	159	47.74	13.55	1e-47	pfam02837 Glyco_hydro_2_N Glycosyl hydrolases family 2 sugar binding domain. This family contains beta-galactosidase beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold.
	gnl\|CDD\|170280	129	509	381	Gaps:53	62.60	607	28.68	16.32	1e-42	PRK10150 PRK10150 beta-D-glucuronidase Provisional.
	gnl\|CDD\|144343	229	333	105	Gaps:4	99.07	108	30.84	15.89	2e-16	pfam00703 Glyco_hydro_2 domain. This family contains beta-galactosidase beta-mannosidase and beta-glucuronidase activities.
rpsblast_kog	no results

Other analysis

Functional Gbrowse

Structural Gbrowse

Genome Mapping at gene locus

Analysis	Hit name	RefStart	RefEnd	Hit length	Hit identity	Hit coverage	eValue	Hit description
RepeatMasker_ALL_Repbase	no results
TRF	no results
REPET	no results
sim4_Bot_allest	YCOA_552059	165253	165965	713	98.74	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCOA_552089	165264	165965	702	98.58	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCOA_552104	165301	165965	665	98.65	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCOA_549610	165316	165965	650	98.62	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCOA_549199	165316	165965	650	98.62	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCMA_561929	165309	165951	643	98.60	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCOA_570547	165345	165965	621	98.55	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCOA_569416	165345	165965	621	98.55	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCOA_549807	165374	165965	593	98.31	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCOA_568871	165431	165965	535	98.32	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCMA_548398	166494	167001	508	99.21	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCMA_562211	165455	165965	512	98.05	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCOA_555883	165523	165965	443	97.97	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCOA_549893	165527	165965	439	97.95	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCMA_553974	166281	166589	309	99.68	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCOA_569577	165743	165965	223	96.86	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCOA_563081	165842	165965	133	84.96	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCHA_535592	168021	168638	618	99.35	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCHA_535345	167752	168336	584	99.32	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCIA_537500	168082	168606	525	99.05	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCHA_544608	167903	168336	435	97.47	100.00	n/a	Botrytis cinerea HortResearch libraries
sim4_Bot_allest4_clctg	no results
sim4_Ss_allest	no results
blastx_uniprot_sprot	P06864	165024	168034	1030	37.82	88.06	n/a	Evolved beta-galactosidase subunit alpha - Escherichia coli (strain K12)
	P00723	165024	168259	1025	42.44	94.24	n/a	Beta-galactosidase - Kluyveromyces lactis (Yeast) (Candida sphaerica)
	O52847	165093	168034	1034	38.02	86.75	n/a	Beta-galactosidase - Bacillus megaterium
	Q56307	165093	168043	1084	38.06	81.92	n/a	Beta-galactosidase - Thermotoga maritima
	Q47077	165012	168076	1028	36.72	93.00	n/a	Beta-galactosidase - Enterobacter cloacae
	P81650	166310	168034	1039	46.11	51.97	n/a	Beta-galactosidase - Pseudoalteromonas haloplanktis (Alteromonas haloplanktis)
	P00722	166310	168022	1024	44.98	52.54	n/a	Beta-galactosidase - Escherichia coli (strain K12)
	P24131	165345	168040	897	35.29	91.30	n/a	Beta-galactosidase - Clostridium acetobutylicum
	Q59140	166289	168241	1015	46.35	58.03	n/a	Beta-galactosidase - Arthrobacter sp. (strain B7)
	P06219	166310	168145	1034	41.41	56.29	n/a	Beta-galactosidase - Klebsiella pneumoniae
blastx_uniprot_trembl	Q7SEC4	165009	168274	929	59.07	96.77	n/a	Putative uncharacterized protein - Neurospora crassa
	A1DD70	165009	168274	1055	57.75	98.48	n/a	Beta-galactosidase - Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181) (Aspergillus fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
	Q0C7U1	165009	168289	1054	57.40	98.67	n/a	Putative uncharacterized protein - Aspergillus terreus (strain NIH 2624)
	A4QWV8	165006	168274	1046	57.77	97.80	n/a	Putative uncharacterized protein - Magnaporthe grisea (Rice blast fungus) (Pyricularia grisea)
	Q4WW62	165009	168274	1055	57.17	98.48	n/a	Beta-galactosidase putative - Aspergillus fumigatus (Sartorya fumigata)
	Q5B8C9	165024	168259	1030	55.58	97.48	n/a	Putative uncharacterized protein - Emericella nidulans (Aspergillus nidulans)
	Q2HEU6	165003	168274	1021	56.51	93.24	n/a	Putative uncharacterized protein - Chaetomium globosum (Soil fungus)
	Q6BGP8	165018	168271	1022	46.39	97.65	n/a	Similar to sp\|P00723 Kluyveromyces lactis LAC4 Beta-galactosidase - Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
	A3LPQ6	165009	168052	1021	44.50	93.54	n/a	Beta-galactosidase - Pichia stipitis (Yeast)
blastx_FNG30_prot	NCU00810.2	165009	168274	929	59.07	96.77	n/a	Neurospora crassa hypothetical protein translation 930 aa
	MGG_05890.5	165006	168274	1046	57.77	97.80	n/a	magnaporthe_grisea hypothetical protein translation 1047 aa
	gi:70996895:ref:XP_753202.1:	165009	168274	1055	57.17	98.48	n/a	Aspergillus fumigatus Af293 glycosyl hydrolase family 2
	FG03269.1	165009	168286	1049	55.72	98.38	n/a	fusarium_graminearum hypothetical protein 1050 aa
	FG07689.1	165147	168259	994	56.26	97.28	n/a	fusarium_graminearum hypothetical protein 995 aa
	AN3201	165024	168259	1030	55.58	97.48	n/a	Aspergillus nidulans AN3201.3 conserved hypothetical protein translation 1031 aa
	CHG01258.1	165003	168274	1021	56.51	93.24	n/a	Chaetomium globosum hypothetical protein translation 1022 aa
	gi:50428021:ref:XP_462623.1	165018	168271	1022	46.39	97.65	n/a	Debaryomyces hansenii CBS767 hypothetical protein DEHA0G26345g
	SNU03550.1	165057	168082	1034	46.58	91.78	n/a	Stagonospora nodorum hypothetical protein translation
	FG00096.1	165015	168196	1011	45.45	92.48	n/a	fusarium_graminearum hypothetical protein 1012 aa
sim4_B0510_genes	BC1G_06897.1	165000	168289	3174	99.37	100.00	n/a	n/a
sim4_SS_genes	SS1G_11763.1	166209	168278	1854	84.13	72.38	n/a	n/a
blastn_b0510_supercontig	B0510_supercontig_1.38	162092	170721	305086	99.03	n/a	n/a	n/a
blastn_SS_supercontig	SS_supercontig_1.20	166281	167352	846165	80.97	n/a	n/a	n/a
	SS_supercontig_1.20	167657	168274	846165	83.82	n/a	n/a	n/a
	SS_supercontig_1.20	165014	165884	846165	79.91	n/a	n/a	n/a
blat_oligo	botrytisP00103988	166471	166530	60	n/a	n/a	n/a	array_gene:BofuT4_P088120_1 . max_over_threshold:110.22 . min_over_threshold:21.81 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00103989	166314	166373	60	n/a	n/a	n/a	array_gene:BofuT4_P088120_1 . max_over_threshold:136.97 . min_over_threshold:30.32 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00103990	166017	166076	60	n/a	n/a	n/a	array_gene:BofuT4_P088120_1 . max_over_threshold:83.89 . min_over_threshold:8.31 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00103992	165776	165835	60	n/a	n/a	n/a	array_gene:BofuT4_P088120_1 . max_over_threshold:69.51 . min_over_threshold:6.51 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00103993	165690	165749	60	n/a	n/a	n/a	array_gene:BofuT4_P088120_1 . max_over_threshold:159.92 . min_over_threshold:23.21 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00103994	165586	165645	60	n/a	n/a	n/a	array_gene:BofuT4_P088120_1 . max_over_threshold:84.81 . min_over_threshold:17.97 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00103995	165509	165568	60	n/a	n/a	n/a	array_gene:BofuT4_P088120_1 . max_over_threshold:127.03 . min_over_threshold:26.41 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00103996	165305	165364	60	n/a	n/a	n/a	array_gene:BofuT4_P088120_1 . max_over_threshold:50.65 . min_over_threshold:7.99 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00103997	165046	165105	60	n/a	n/a	n/a	array_gene:BofuT4_P088120_1 . max_over_threshold:154.64 . min_over_threshold:34.77 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:1

Current manual annotation

Ortholog