GRS - Genome Report System

Botrytis cinerea T4 GRS

Functional annotation

BofuT4_P087030.1

Gene Identifier

DbXrefs

Domain/Motif (Interproscan results)

Localization / Targeting

Predicted function

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	bfu:BC1G_10185	1	488	488	n/a	100.00	488	96.93	0.00	0.0	hypothetical protein
	ssl:SS1G_07116	1	488	488	Gaps:3	100.00	485	90.52	3.30	0.0	hypothetical protein
	ure:UREG_02940	42	488	447	Gaps:2	97.39	459	51.68	17.00	1e-130	similar to aminotransferase
	pcs:Pc21g23440	58	488	431	Gaps:2	95.14	453	51.74	16.94	1e-129	Pc21g23440
	cim:CIMG_03000	42	488	447	Gaps:2	96.96	461	50.34	17.00	1e-128	hypothetical protein
	aor:AO090005001000	58	488	431	Gaps:2	89.42	482	51.74	15.55	1e-127	adenosylmethionine-8-amino-7-oxononanoate aminotransferase
	afm:AFUA_1G16810	58	488	431	Gaps:2	90.74	475	51.74	16.01	1e-127	aminotransferase class III (EC:2.6.1.-)
	afv:AFLA_082540	58	488	431	Gaps:2	94.52	456	51.74	15.31	1e-126	aminotransferase class III
	ncr:NCU08011	45	485	441	Gaps:2	93.60	469	49.66	15.95	1e-126	similar to aminotransferase K00837 [EC:2.6.1.-]
	nfi:NFIA_008550	58	488	431	Gaps:2	94.10	458	51.51	15.78	1e-126	aminotransferase class III
blastp_uniprot_sprot	sp\|O94562\|YGD3_SCHPO	40	488	449	Gaps:4	96.95	459	40.90	16.40	3e-96	Uncharacterized aminotransferase C1771.03c OS Schizosaccharomyces pombe GN SPBC1773.03c PE 2 SV 1
	sp\|O34662\|YODT_BACSU	42	488	447	Gaps:7	99.10	444	33.41	19.77	1e-68	Uncharacterized aminotransferase yodT OS Bacillus subtilis GN yodT PE 3 SV 1
	sp\|Q53196\|Y4UB_RHISN	52	488	437	Gaps:28	91.86	467	32.40	17.72	6e-50	Uncharacterized aminotransferase y4uB OS Rhizobium sp. (strain NGR234) GN NGR_a01380 PE 3 SV 1
	sp\|P22805\|BIOA_BACSH	51	487	437	Gaps:28	93.85	455	29.74	19.44	3e-48	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase OS Bacillus sphaericus GN bioA PE 1 SV 1
	sp\|Q9APM5\|TPA_BILWA	51	474	424	Gaps:22	91.67	456	33.49	17.22	1e-47	Taurine--pyruvate aminotransferase OS Bilophila wadsworthia GN tpa PE 1 SV 1
	sp\|P33189\|YHXA_BACSU	59	484	426	Gaps:23	91.33	450	33.58	17.03	1e-47	Uncharacterized aminotransferase yhxA OS Bacillus subtilis GN yhxA PE 3 SV 4
	sp\|Q97GH9\|ARGD_CLOAB	59	423	365	Gaps:49	86.30	387	35.63	19.46	1e-40	Acetylornithine aminotransferase OS Clostridium acetobutylicum GN argD PE 3 SV 1
	sp\|Q976K0\|ARGD_SULTO	57	471	415	Gaps:61	91.47	387	33.90	21.47	1e-39	Acetylornithine/acetyl-lysine aminotransferase OS Sulfolobus tokodaii GN argD PE 3 SV 1
	sp\|P53555\|BIOK_BACSU	51	484	434	Gaps:49	93.97	448	30.64	18.05	3e-39	Lysine-8-amino-7-oxononanoate aminotransferase OS Bacillus subtilis GN bioK PE 1 SV 1
	sp\|O04866\|ARGD_ALNGL	56	471	416	Gaps:55	80.93	451	32.33	22.19	3e-39	Acetylornithine aminotransferase mitochondrial OS Alnus glutinosa GN AG118 PE 2 SV 1
blastp_pdb	3i4j_D	52	471	420	Gaps:20	94.42	430	35.71	14.53	7e-57	mol:protein length:430 Aminotransferase class III
	3i4j_C	52	471	420	Gaps:20	94.42	430	35.71	14.53	7e-57	mol:protein length:430 Aminotransferase class III
	3i4j_B	52	471	420	Gaps:20	94.42	430	35.71	14.53	7e-57	mol:protein length:430 Aminotransferase class III
	3i4j_A	52	471	420	Gaps:20	94.42	430	35.71	14.53	7e-57	mol:protein length:430 Aminotransferase class III
	3hmu_B	56	486	431	Gaps:23	88.14	472	32.21	17.07	3e-46	mol:protein length:472 Aminotransferase class III
	3hmu_A	56	486	431	Gaps:23	88.14	472	32.21	17.07	3e-46	mol:protein length:472 Aminotransferase class III
	3gju_A	49	488	440	Gaps:30	94.35	460	30.41	17.51	6e-44	mol:protein length:460 Putative aminotransferase
	3n5m_D	70	484	415	Gaps:28	89.60	452	30.62	19.26	2e-43	mol:protein length:452 Adenosylmethionine-8-amino-7-oxononanoate ami
	3n5m_C	70	484	415	Gaps:28	89.60	452	30.62	19.26	2e-43	mol:protein length:452 Adenosylmethionine-8-amino-7-oxononanoate ami
	3n5m_B	70	484	415	Gaps:28	89.60	452	30.62	19.26	2e-43	mol:protein length:452 Adenosylmethionine-8-amino-7-oxononanoate ami
rpsblast_cdd	gnl\|CDD\|168969	42	484	443	Gaps:5	98.87	443	47.49	15.30	1e-156	PRK07483 PRK07483 hypothetical protein Provisional.
	gnl\|CDD\|30510	48	488	441	Gaps:17	95.32	449	38.79	15.65	1e-114	COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism].
	gnl\|CDD\|99735	55	481	427	Gaps:33	95.40	413	39.85	17.01	2e-96	cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase acetylornithine aminotransferase alanine-glyoxylate aminotransferase dialkylglycine decarboxylase 4-aminobutyrate aminotransferase beta-alanine-pyruvate aminotransferase adenosylmethionine-8-amino-7-oxononanoate aminotransferase and glutamate-1-semialdehyde 2 1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation..
	gnl\|CDD\|168726	43	484	442	Gaps:6	97.54	447	32.80	20.41	6e-91	PRK06917 PRK06917 hypothetical protein Provisional.
	gnl\|CDD\|30509	52	484	433	Gaps:30	91.95	447	35.28	16.55	9e-80	COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism].
	gnl\|CDD\|168598	53	419	367	Gaps:5	78.70	460	36.19	15.47	2e-78	PRK06541 PRK06541 hypothetical protein Provisional.
	gnl\|CDD\|168966	56	477	422	Gaps:20	88.89	459	34.07	16.67	1e-76	PRK07480 PRK07480 putative aminotransferase Validated.
	gnl\|CDD\|143959	56	411	356	Gaps:18	100.00	338	37.57	15.09	3e-74	pfam00202 Aminotran_3 Aminotransferase class-III.
	gnl\|CDD\|168395	56	484	429	Gaps:29	90.87	460	32.78	19.14	3e-74	PRK06105 PRK06105 aminotransferase Provisional.
	gnl\|CDD\|166401	56	481	426	Gaps:34	85.07	489	34.62	18.03	2e-71	PLN02760 PLN02760 4-aminobutyrate:pyruvate transaminase.
rpsblast_kog	gnl\|CDD\|36618	26	484	459	Gaps:26	98.87	442	34.55	15.10	4e-91	KOG1404 KOG1404 KOG1404 Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism].
	gnl\|CDD\|36615	56	447	392	Gaps:30	85.45	433	34.59	13.51	2e-48	KOG1401 KOG1401 KOG1401 Acetylornithine aminotransferase [Amino acid transport and metabolism].
	gnl\|CDD\|36616	22	482	461	Gaps:53	97.42	427	30.05	19.23	1e-47	KOG1402 KOG1402 KOG1402 Ornithine aminotransferase [Amino acid transport and metabolism].
	gnl\|CDD\|36617	57	429	373	Gaps:32	78.98	452	29.97	19.05	5e-40	KOG1403 KOG1403 KOG1403 Predicted alanine-glyoxylate aminotransferase [General function prediction only].
	gnl\|CDD\|36619	62	482	421	Gaps:73	85.95	484	24.28	18.27	5e-21	KOG1405 KOG1405 KOG1405 4-aminobutyrate aminotransferase [Amino acid transport and metabolism].

Other analysis

Functional Gbrowse

Structural Gbrowse

Genome Mapping at gene locus

Analysis	Hit name	RefStart	RefEnd	Hit length	Hit identity	Hit coverage	eValue	Hit description
RepeatMasker_ALL_Repbase	no results
TRF	no results
REPET	no results
sim4_Bot_allest	BcA1_3473_D08	198096	198893	788	99.75	100.00	n/a	BC A1 mycelium
	BcA1_3466_J05	197903	198640	737	99.59	100.00	n/a	BC A1 mycelium
	YCGA_532702	199084	199742	606	99.83	100.00	n/a	Botrytis cinerea HortResearch libraries
	B1BC_045_042_A03	198795	199721	875	99.77	100.00	n/a	BC ATCC 58025 (G3)
sim4_Bot_allest4_clctg	CL_bt4_SuperContig_131_1_bt4ctg_1154_013.Contig1_v5	197903	199721	1767	99.66	100.00	n/a	all_lib_clone_nr:3
sim4_Ss_allest	G787P574RG9.T0	199045	199269	176	92.00	99.43	n/a	Ss ESTs grown as developing apothecia
	G787P574FG9.T0	199045	199269	176	91.43	99.43	n/a	Ss ESTs grown as developing apothecia
	G787P535RA7.T0	198915	199762	830	89.03	95.54	n/a	Ss ESTs grown as developing apothecia
blastx_uniprot_sprot	O34662	198089	199138	444	38.08	77.48	n/a	Uncharacterized aminotransferase yodT - Bacillus subtilis
	Q53196	198089	199452	467	33.10	91.86	n/a	Uncharacterized aminotransferase y4uB - Rhizobium sp. (strain NGR234)
	P33189	198101	199138	450	35.93	74.22	n/a	Uncharacterized aminotransferase yhxA - Bacillus subtilis
	Q9APM5	198131	199138	456	33.33	72.37	n/a	Taurine--pyruvate aminotransferase - Bilophila wadsworthia
	P53555	198101	199455	448	30.40	93.97	n/a	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase - Bacillus subtilis
	P22805	198095	199132	455	31.34	73.63	n/a	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase - Bacillus sphaericus
	Q940M2	198131	199521	476	31.97	87.39	n/a	Alanine--glyoxylate aminotransferase 2 homolog 1 mitochondrial precursor - Arabidopsis thaliana (Mouse-ear cress)
	Q31WW1	198314	199138	459	38.49	54.90	n/a	Putrescine aminotransferase - Shigella boydii serotype 4 (strain Sb227)
	Q0TD34	198314	199138	459	38.10	54.90	n/a	Putrescine aminotransferase - Escherichia coli O6:K15:H31 (strain 536 / UPEC)
	Q1R6Q7	198314	199138	459	38.10	54.90	n/a	Putrescine aminotransferase - Escherichia coli (strain UTI89 / UPEC)
blastx_uniprot_trembl	Q1E363	198089	199132	461	57.88	75.70	n/a	Putative uncharacterized protein - Coccidioides immitis
	Q2UR25	198098	199132	482	58.67	71.78	n/a	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase - Aspergillus oryzae
	Q4WRC1	198089	199132	475	57.88	73.47	n/a	Aminotransferase class III - Aspergillus fumigatus (Sartorya fumigata)
	A4QRS8	198101	199138	460	58.38	75.22	n/a	Putative uncharacterized protein - Magnaporthe grisea (Rice blast fungus) (Pyricularia grisea)
	A1D185	198089	199132	458	57.31	76.20	n/a	Aminotransferase class III - Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181) (Aspergillus fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
	A2QA40	198098	199138	458	57.18	75.98	n/a	Similarity: strong similarity to superfamily of aminotransferases/transaminases. - Aspergillus niger
	A1CNE2	198089	199132	458	56.16	76.20	n/a	Aminotransferase class III - Aspergillus clavatus
	Q2H0Z0	198098	199138	476	56.90	73.11	n/a	Putative uncharacterized protein - Chaetomium globosum (Soil fungus)
blastx_FNG30_prot	SS1G_07116.1	198089	199605	485	93.40	100.00	n/a	sclerotinia_sclerotiorum hypothetical protein translation 486 aa
	CIMG_03000.2	198089	199132	461	57.88	75.70	n/a	Coccidioides immitis hypothetical protein translation 462 aa
	AO090005001000	198098	199132	482	58.67	71.78	n/a	Aspergillus oryzae adenosylmethionine-8-amino-7-oxononanoate aminotransferase
	gi:70996588:ref:XP_753049.1:	198089	199132	475	57.88	73.47	n/a	Aspergillus fumigatus Af293 aminotransferase class III
	MGG_03494.5	198101	199138	460	58.38	75.22	n/a	magnaporthe_grisea hypothetical protein translation 461 aa
	AN0991	198089	199132	448	57.31	77.90	n/a	Aspergillus nidulans AN0991.3 conserved hypothetical protein translation 449 aa
	CHG04556.1	198098	199138	476	56.90	73.11	n/a	Chaetomium globosum hypothetical protein translation 477 aa
	NCU08011.2	198098	199138	469	55.20	73.77	n/a	Neurospora crassa hypothetical protein translation 470 aa
	jgi:Triree:15442	198131	199132	424	57.86	79.48	n/a	Trichoderma reesei
	AN6930	198098	199132	447	54.62	77.40	n/a	Aspergillus nidulans AN6930.3 conserved hypothetical protein translation 448 aa
sim4_B0510_genes	BC1G_10185.1	198086	199605	1467	100.00	100.00	n/a	n/a
sim4_SS_genes	SS1G_07116.1	198164	199605	1458	88.48	94.65	n/a	n/a
blastn_b0510_supercontig	B0510_supercontig_1.67	197879	200948	225410	99.67	n/a	n/a	n/a
blastn_SS_supercontig	SS_supercontig_1.9	198087	199155	1625527	86.53	n/a	n/a	n/a
blastn_SS_supercontig	SS_supercontig_1.9	199181	199491	1625527	92.93	n/a	n/a	n/a
blat_oligo	botrytisP00103228	199526	199585	60	n/a	n/a	n/a	array_gene:BofuT4_P087030_1 . max_over_threshold:6.91 . min_over_threshold:0.5 . percent_hyb_over_threshold:92.85 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00103229	199362	199421	60	n/a	n/a	n/a	array_gene:BofuT4_P087030_1 . max_over_threshold:22.56 . min_over_threshold:0.52 . percent_hyb_over_threshold:92.85 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00103230	199260	199319	60	n/a	n/a	n/a	array_gene:BofuT4_P087030_1 . max_over_threshold:41.79 . min_over_threshold:0.65 . percent_hyb_over_threshold:92.85 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00103231	199116	199228	60	n/a	n/a	n/a	array_gene:BofuT4_P087030_1 . max_over_threshold:65.96 . min_over_threshold:1.06 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00103233	198970	199029	60	n/a	n/a	n/a	array_gene:BofuT4_P087030_1 . max_over_threshold:86.3 . min_over_threshold:1.42 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00103234	198747	198806	60	n/a	n/a	n/a	array_gene:BofuT4_P087030_1 . max_over_threshold:11.75 . min_over_threshold:0.71 . percent_hyb_over_threshold:92.85 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00103235	198564	198623	60	n/a	n/a	n/a	array_gene:BofuT4_P087030_1 . max_over_threshold:53.78 . min_over_threshold:3.99 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00103236	198408	198467	60	n/a	n/a	n/a	array_gene:BofuT4_P087030_1 . max_over_threshold:87.38 . min_over_threshold:14.98 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00103237	198197	198256	60	n/a	n/a	n/a	array_gene:BofuT4_P087030_1 . max_over_threshold:110.65 . min_over_threshold:25.24 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0

Current manual annotation

Ortholog