GRS - Genome Report System

Botrytis cinerea T4 GRS

Functional annotation

BofuT4_P081610.1

Gene Identifier

DbXrefs

Domain/Motif (Interproscan results)

Localization / Targeting

Predicted function

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	bfu:BC1G_03118	1	1446	1446	n/a	100.00	1446	95.02	0.00	0.0	hypothetical protein K00106 xanthine dehydrogenase/oxidase [EC:1.17.1.4 1.17.3.2]
	ssl:SS1G_08428	96	1446	1351	Gaps:6	99.19	1366	81.70	7.01	0.0	hypothetical protein K00106 xanthine dehydrogenase/oxidase [EC:1.17.1.4 1.17.3.2]
	nfi:NFIA_094210	17	1446	1430	Gaps:48	98.58	1404	63.22	12.86	0.0	xanthine dehydrogenase K00106 xanthine dehydrogenase/oxidase [EC:1.17.1.4 1.17.3.2]
	pno:SNOG_04191	10	1446	1437	Gaps:48	98.19	1490	58.65	15.17	0.0	hypothetical protein K00106 xanthine dehydrogenase/oxidase [EC:1.17.1.4 1.17.3.2]
	ang:An03g01530	3	1446	1444	Gaps:85	99.93	1382	63.36	12.82	0.0	hypothetical protein K00106 xanthine dehydrogenase/oxidase [EC:1.17.1.4 1.17.3.2]
	ani:AN9178.2	19	1446	1428	Gaps:109	99.19	1350	61.31	12.85	0.0	hypothetical protein K00106 xanthine dehydrogenase/oxidase [EC:1.17.1.4 1.17.3.2]
	nfi:NFIA_105140	16	1445	1430	Gaps:113	97.94	1359	53.19	16.38	0.0	xanthine dehydrogenase HxA putative K00106 xanthine dehydrogenase/oxidase [EC:1.17.1.4 1.17.3.2]
	act:ACLA_050310	16	1445	1430	Gaps:125	97.94	1359	52.74	16.83	0.0	xanthine dehydrogenase HxA putative K00106 xanthine dehydrogenase/oxidase [EC:1.17.1.4 1.17.3.2]
	afm:AFUA_4G11220	16	1445	1430	Gaps:133	97.94	1359	53.27	16.23	0.0	xanthine dehydrogenase HxA (EC:1.17.1.4) K00106 xanthine dehydrogenase/oxidase [EC:1.17.1.4 1.17.3.2]
	aor:AO090003001099	16	1445	1430	Gaps:113	97.94	1359	53.34	15.78	0.0	xanthine dehydrogenase K00106 xanthine dehydrogenase/oxidase [EC:1.17.1.4 1.17.3.2]
blastp_uniprot_sprot	sp\|Q12553\|XDH_EMENI	16	1445	1430	Gaps:116	97.58	1363	52.11	17.82	0.0	Xanthine dehydrogenase OS Emericella nidulans GN hxA PE 2 SV 2
	sp\|P47990\|XDH_CHICK	19	1429	1411	Gaps:140	98.16	1358	44.56	17.10	0.0	Xanthine dehydrogenase/oxidase OS Gallus gallus GN XDH PE 1 SV 1
	sp\|P10351\|XDH_DROME	16	1429	1414	Gaps:157	98.65	1335	43.74	19.06	0.0	Xanthine dehydrogenase OS Drosophila melanogaster GN ry PE 2 SV 2
	sp\|P08793\|XDH_CALVI	17	1429	1413	Gaps:148	97.63	1353	43.91	17.71	0.0	Xanthine dehydrogenase OS Calliphora vicina GN XDH PE 2 SV 1
	sp\|P22811\|XDH_DROPS	15	1429	1415	Gaps:157	98.44	1343	42.89	19.44	0.0	Xanthine dehydrogenase OS Drosophila pseudoobscura pseudoobscura GN ry PE 3 SV 2
	sp\|Q9MYW6\|XDH_FELCA	19	1429	1411	Gaps:155	98.42	1331	43.36	17.71	0.0	Xanthine dehydrogenase/oxidase OS Felis catus GN XDH PE 2 SV 3
	sp\|Q54FB7\|XDH_DICDI	15	1424	1410	Gaps:142	98.23	1358	41.23	19.49	0.0	Xanthine dehydrogenase OS Dictyostelium discoideum GN xdh PE 3 SV 1
	sp\|P80457\|XDH_BOVIN	19	1429	1411	Gaps:80	95.65	1332	44.35	18.60	0.0	Xanthine dehydrogenase/oxidase OS Bos taurus GN XDH PE 1 SV 4
	sp\|P47989\|XDH_HUMAN	19	1429	1411	Gaps:81	95.65	1333	44.63	17.41	0.0	Xanthine dehydrogenase/oxidase OS Homo sapiens GN XDH PE 1 SV 4
	sp\|Q00519\|XDH_MOUSE	19	1429	1411	Gaps:85	96.55	1335	43.91	18.00	0.0	Xanthine dehydrogenase/oxidase OS Mus musculus GN Xdh PE 1 SV 4
blastp_pdb	3bdj_B	19	1429	1411	Gaps:80	95.65	1332	44.35	18.60	0.0	mol:protein length:1332 Xanthine dehydrogenase/oxidase
	3bdj_A	19	1429	1411	Gaps:80	95.65	1332	44.35	18.60	0.0	mol:protein length:1332 Xanthine dehydrogenase/oxidase
	1vdv_B	19	1429	1411	Gaps:80	95.65	1332	44.35	18.60	0.0	mol:protein length:1332 Xanthine dehydrogenase/oxidase
	1vdv_A	19	1429	1411	Gaps:80	95.65	1332	44.35	18.60	0.0	mol:protein length:1332 Xanthine dehydrogenase/oxidase
	1v97_B	19	1429	1411	Gaps:80	95.65	1332	44.35	18.60	0.0	mol:protein length:1332 Xanthine dehydrogenase
	1v97_A	19	1429	1411	Gaps:80	95.65	1332	44.35	18.60	0.0	mol:protein length:1332 Xanthine dehydrogenase
	1fo4_B	19	1429	1411	Gaps:80	95.65	1332	44.35	18.60	0.0	mol:protein length:1332 XANTHINE DEHYDROGENASE
	1fo4_A	19	1429	1411	Gaps:80	95.65	1332	44.35	18.60	0.0	mol:protein length:1332 XANTHINE DEHYDROGENASE
	1n5x_B	19	1429	1411	Gaps:80	95.72	1331	44.35	18.60	0.0	mol:protein length:1331 Xanthine Dehydrogenase
	1n5x_A	19	1429	1411	Gaps:80	95.72	1331	44.35	18.60	0.0	mol:protein length:1331 Xanthine Dehydrogenase
rpsblast_cdd	gnl\|CDD\|166547	1	1427	1427	Gaps:132	98.97	1361	44.77	16.63	0.0	PLN02906 PLN02906 xanthine dehydrogenase.
	gnl\|CDD\|132014	19	1429	1411	Gaps:167	98.65	1330	40.93	19.28	0.0	TIGR02969 mam_aldehyde_ox aldehyde oxidase. Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes closely related to xanthine dehydrogenase/oxidase.
	gnl\|CDD\|163089	661	1422	762	Gaps:64	99.47	758	44.43	15.65	0.0	TIGR02965 xanthine_xdhB xanthine dehydrogenase molybdopterin binding subunit. Members of the protein family are the molybdopterin-containing large subunit (or in eukaryotes the molybdopterin-binding domain) of xanthine dehydrogenase and enzyme that reduces the purine pool by catabolizing xanthine to urate. This model is based primarily on bacterial sequences it does not manage to include all eukaryotic xanthine dehydrogenases and thereby discriminate them from the closely related enzyme aldehyde dehydrogenase.
	gnl\|CDD\|34250	660	1422	763	Gaps:51	96.54	781	44.16	15.25	0.0	COG4631 XdhB Xanthine dehydrogenase molybdopterin-binding subunit B [Nucleotide transport and metabolism].
	gnl\|CDD\|145733	791	1338	548	Gaps:13	100.00	543	43.28	16.76	1e-176	pfam02738 Ald_Xan_dh_C2 Molybdopterin-binding domain of aldehyde dehydrogenase.
	gnl\|CDD\|165758	19	1434	1416	Gaps:213	97.01	1370	34.01	15.73	1e-129	PLN00192 PLN00192 abscisic-aldehyde oxidase/ indole-3-acetaldehyde oxidase.
	gnl\|CDD\|31718	659	1424	766	Gaps:54	99.59	731	26.92	18.54	4e-91	COG1529 CoxL Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs [Energy production and conversion].
	gnl\|CDD\|132240	673	1402	730	Gaps:61	97.79	768	25.83	17.18	3e-68	TIGR03196 pucD xanthine dehydrogenase D subunit. This gene has been characterized in B. subtilis as the molybdopterin binding-subunit of xanthine dehydrogenase (pucD) acting in conjunction with pucC the FAD-binding subunit and pucE the FeS-binding subunit. The more common XDH complex (GenProp0640) includes the xdhB gene which is related to pucD. It appears that most of the relatives of pucD outside of this narrow clade are involved in other processes as they are found in unrelated genomic contexts contain the more common XDH complex and/or do not appear to process purines to allantoin.
	gnl\|CDD\|163087	19	624	606	Gaps:49	100.00	467	42.40	15.20	5e-66	TIGR02963 xanthine_xdhA xanthine dehydrogenase small subunit. Members of this protein family are the small subunit (or in eukaryotes the N-terminal domain) of xanthine dehydrogenase an enzyme of purine catabolism via urate. The small subunit contains both an FAD and a 2Fe-2S cofactor. Aldehyde oxidase (retinal oxidase) appears to have arisen as a neofunctionalization among xanthine dehydrogenases in eukaryotes and.
	gnl\|CDD\|132354	19	1388	1370	Gaps:131	98.58	848	31.58	17.58	4e-58	TIGR03311 Se_dep_Molyb_1 selenium-dependent molybdenum hydroxylase 1. Members of this protein family show full length homology to the molybdenum-containing aldehyde oxido-reductase of Desulfovibrio gigas. Members however are found only within species that have and near those genes that encode a set of predicted accessory proteins for selenium-dependent molybdenum hydroxylases. The best known examples of such enzymes are forms of xanthine dehydrogenase and purine hydroxylase this family appears to be another such enzyme.
rpsblast_kog	gnl\|CDD\|35651	17	1429	1413	Gaps:97	99.76	1257	43.38	17.78	0.0	KOG0430 KOG0430 KOG0430 Xanthine dehydrogenase [Nucleotide transport and metabolism].

Other analysis

Functional Gbrowse

Structural Gbrowse

Genome Mapping at gene locus

Analysis	Hit name	RefStart	RefEnd	Hit length	Hit identity	Hit coverage	eValue	Hit description
RepeatMasker_ALL_Repbase	no results
TRF	no results
REPET	no results
sim4_Bot_allest	YCMA_548738	89772	90475	650	99.69	100.00	n/a	Botrytis cinerea HortResearch libraries
sim4_Bot_allest4_clctg	no results
sim4_Ss_allest	no results
blastx_uniprot_sprot	Q12553	88075	92525	1363	54.48	97.36	n/a	Xanthine dehydrogenase - Emericella nidulans (Aspergillus nidulans)
	P47990	88123	92516	1358	46.83	97.64	n/a	Xanthine dehydrogenase/oxidase [Includes: Xanthine dehydrogenase - Gallus gallus (Chicken)
	P10351	88123	92525	1335	45.93	96.70	n/a	Xanthine dehydrogenase - Drosophila melanogaster (Fruit fly)
	P47989	88123	92516	1333	46.69	95.12	n/a	Xanthine dehydrogenase/oxidase [Includes: Xanthine dehydrogenase - Homo sapiens (Human)
	Q00519	88123	92516	1335	46.03	96.33	n/a	Xanthine dehydrogenase/oxidase [Includes: Xanthine dehydrogenase - Mus musculus (Mouse)
	P22985	88123	92516	1331	45.60	97.22	n/a	Xanthine dehydrogenase/oxidase [Includes: Xanthine dehydrogenase - Rattus norvegicus (Rat)
	P80457	88123	92516	1332	46.49	95.12	n/a	Xanthine dehydrogenase/oxidase [Includes: Xanthine dehydrogenase - Bos taurus (Bovine)
	P91711	88114	92522	1344	46.08	95.76	n/a	Xanthine dehydrogenase - Drosophila subobscura (Fruit fly)
	P08793	88123	92522	1353	46.56	94.60	n/a	Xanthine dehydrogenase - Calliphora vicina (Blue blowfly) (Calliphora erythrocephala)
	P22811	88123	92522	1343	45.47	95.31	n/a	Xanthine dehydrogenase - Drosophila pseudoobscura (Fruit fly)
blastx_uniprot_trembl	A2QG16	88072	92516	1382	67.65	98.19	n/a	Catalytic activity: xanthine dehydrogenase - Aspergillus niger
	Q0CCG8	88381	92522	1348	67.58	97.26	n/a	Xanthine dehydrogenase - Aspergillus terreus (strain NIH 2624)
	A1DAB1	88072	92522	1404	66.40	98.58	n/a	Xanthine dehydrogenase - Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181) (Aspergillus fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
	A6R976	88384	92555	1386	65.18	95.53	n/a	Xanthine dehydrogenase - Ajellomyces capsulata (strain NAm1) (Histoplasma capsulatum)
	Q5ARA2	88072	92100	1350	62.59	93.85	n/a	Putative uncharacterized protein - Emericella nidulans (Aspergillus nidulans)
	Q2GVC8	88075	92525	1371	56.08	94.16	n/a	Putative uncharacterized protein - Chaetomium globosum (Soil fungus)
	A4R7F7	88075	91722	1325	53.48	89.89	n/a	Putative uncharacterized protein - Magnaporthe grisea (Rice blast fungus) (Pyricularia grisea)
	Q0UVM3	88072	92582	1490	61.59	98.72	n/a	Putative uncharacterized protein - Phaeosphaeria nodorum (Septoria nodorum)
blastx_FNG30_prot	SS1G_08428.1	88072	92100	1366	84.42	97.29	n/a	sclerotinia_sclerotiorum hypothetical protein translation 1367 aa
	AN9178	88072	92100	1350	62.59	93.85	n/a	Aspergillus nidulans AN9178.3 conserved hypothetical protein translation 1351 aa
	AO090003001099	88075	92525	1359	55.37	97.94	n/a	Aspergillus oryzae xanthine dehydrogenase
	gi:70993720:ref:XP_751707.1:	88075	92525	1359	55.30	97.94	n/a	Aspergillus fumigatus Af293 xanthine dehydrogenase
	NCU03350.2	88075	92570	1375	56.35	95.13	n/a	Neurospora crassa conserved hypothetical protein translation 1376 aa
	jgi:Triree:31024	88075	92525	1367	55.92	95.10	n/a	Trichoderma reesei
	FG01561.1	88075	92525	1368	56.27	94.44	n/a	fusarium_graminearum hypothetical protein 1369 aa
	CHG08076.1	88075	92525	1371	56.08	94.16	n/a	Chaetomium globosum hypothetical protein translation 1372 aa
	MGG_12738.5	88075	91722	1325	53.48	89.89	n/a	magnaporthe_grisea hypothetical protein translation 1326 aa
	SNU04191.1	88072	92582	1490	61.59	98.72	n/a	Stagonospora nodorum hypothetical protein translation
sim4_B0510_genes	BC1G_03118.1	88069	92570	4341	99.88	100.00	n/a	n/a
sim4_SS_genes	SS1G_08428.1	88069	92236	4101	84.42	77.81	n/a	n/a
sim4_SS_genes	SS1G_08428.1	88069	92236	4101	84.42	77.81	n/a	n/a
blastn_b0510_supercontig	B0510_supercontig_1.12	87730	94236	476850	99.74	n/a	n/a	n/a
blastn_SS_supercontig	SS_supercontig_1.11	88241	89821	1419214	82.23	n/a	n/a	n/a
	SS_supercontig_1.11	89868	91202	1419214	81.65	n/a	n/a	n/a
	SS_supercontig_1.11	91811	92089	1419214	83.15	n/a	n/a	n/a
	SS_supercontig_1.11	92282	92488	1419214	82.61	n/a	n/a	n/a
	SS_supercontig_1.11	92132	92236	1419214	87.62	n/a	n/a	n/a
	SS_supercontig_1.11	88063	88191	1419214	86.82	n/a	n/a	n/a
blat_oligo	botrytisP00099093	89510	89569	60	n/a	n/a	n/a	array_gene:BofuT4_P081610_1 . max_over_threshold:98.28 . min_over_threshold:2.72 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00099095	89398	89457	60	n/a	n/a	n/a	array_gene:BofuT4_P081610_1 . max_over_threshold:71.03 . min_over_threshold:3.33 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00099096	89283	89342	60	n/a	n/a	n/a	array_gene:BofuT4_P081610_1 . max_over_threshold:89.83 . min_over_threshold:3.43 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00099097	88967	89026	60	n/a	n/a	n/a	array_gene:BofuT4_P081610_1 . max_over_threshold:71.99 . min_over_threshold:2.91 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00099098	88802	88861	60	n/a	n/a	n/a	array_gene:BofuT4_P081610_1 . max_over_threshold:120.56 . min_over_threshold:5.06 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00099099	88718	88777	60	n/a	n/a	n/a	array_gene:BofuT4_P081610_1 . max_over_threshold:107.5 . min_over_threshold:4.66 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:1
	botrytisP00099100	88608	88667	60	n/a	n/a	n/a	array_gene:BofuT4_P081610_1 . max_over_threshold:76.87 . min_over_threshold:3.91 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00099101	88558	88617	60	n/a	n/a	n/a	array_gene:BofuT4_P081610_1 . max_over_threshold:99.1 . min_over_threshold:3.52 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00099102	88232	88291	60	n/a	n/a	n/a	array_gene:BofuT4_P081610_1 . max_over_threshold:72.35 . min_over_threshold:2.08 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0

Current manual annotation

Ortholog