GRS - Genome Report System

Botrytis cinerea T4 GRS

Functional annotation

BofuT4_P074910.1

Gene Identifier

DbXrefs

Domain/Motif (Interproscan results)

Localization / Targeting

Predicted function

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	bfu:BC1G_08961	1	749	749	Gaps:61	100.00	596	95.64	1.01	0.0	hypothetical protein
	ssl:SS1G_11471	1	749	749	Gaps:8	100.00	609	65.35	14.29	0.0	hypothetical protein
	ncr:NCU01248	42	748	707	Gaps:143	86.89	801	35.06	17.53	6e-79	hypothetical protein
	mgr:MGG_07061	18	748	731	Gaps:150	97.30	667	34.82	19.57	1e-67	MG07061.4 hypothetical protein
	fgr:FG07140.1	139	748	610	Gaps:96	99.47	561	36.56	18.82	7e-63	hypothetical protein
	pan:PODANSg8107	71	743	673	Gaps:113	98.59	637	32.64	21.02	2e-57	hypothetical protein
	ure:UREG_07872	43	615	573	Gaps:94	86.46	628	34.25	21.18	3e-57	hypothetical protein
	afm:AFUA_2G16100	213	636	424	Gaps:43	63.46	635	34.99	22.83	1e-49	telomere-binding alpha subunit central domain protein
	cim:CIMG_07329	51	615	565	Gaps:130	83.28	604	35.98	19.09	5e-46	hypothetical protein
	nfi:NFIA_091360	213	636	424	Gaps:65	63.46	635	34.49	21.34	4e-45	telomere-binding protein alpha subunit central domain putative
blastp_uniprot_sprot	no results
blastp_pdb	no results
rpsblast_cdd	gnl\|CDD\|72969	43	175	133	Gaps:27	79.71	138	33.64	20.91	3e-09	cd04497 hPOT1_OB1_like hPOT1_OB1_like: A subfamily of OB folds similar to the first OB fold (OB1) of human protection of telomeres 1 protein (hPOT1) the single OB fold of the N-terminal domain of Schizosaccharomyces pombe POT1 (SpPOT1) and the first OB fold of the N-terminal domain of the alpha subunit (OB1Nalpha) of Oxytricha nova telomere end binding protein (OnTEBP). POT1 proteins recognize single-stranded (ss) 3-prime ends of the telomere. A 3-prime ss overhang is conserved in ciliated protozoa yeast and mammals. SpPOT1 is essential for telomere maintenance. It binds specifically to the ss G-rich telomeric sequence (GGTTAC) of S. pombe. hPOT1 binds specifically to ss telomeric DNA repeats ending with the sequence GGTTAG. Deletion of the S. pombe pot1+ gene results in a rapid loss of telomere sequences chromosome mis-segregation and chromosome circularization. hPOT1 is implicated in telomere length regulation. The hPOT1 monomer consists of two closely connected OB folds (OB1-OB2) which cooperate to bind telomeric ssDNA. OB1 makes more extensive contact with the ssDNA than OB2. OB2 protects the 3' end of the ssDNA. A second OB fold has not been predicted in S. pombe POT1. OnTEBP binds the extreme 3-prime end of telomeric DNA. It is heterodimeric and contains four OB folds - three in the alpha subunit (two in the N-terminal domain and one in the C-terminal domain) and one in the beta subunit. OB1Nalpha together with the second OB fold of the N-terminal domain of OnTEBP alpha subunit and the beta subunit OB fold forms a deep cleft that binds ssDNA..
rpsblast_cdd	gnl\|CDD\|145753	41	182	142	Gaps:29	85.82	141	28.10	23.14	2e-07	pfam02765 Telo_bind Telomeric single stranded DNA binding POT1/CDC13. This domain binds single stranded telomeric DNA and adopts an OB fold. It includes the proteins POT1 and CDC13 which have been shown to regulate telomere length replication and capping.
rpsblast_kog	no results

Other analysis

Functional Gbrowse

Structural Gbrowse

Genome Mapping at gene locus

Analysis	Hit name	RefStart	RefEnd	Hit length	Hit identity	Hit coverage	eValue	Hit description
RepeatMasker_ALL_Repbase	no results
TRF	no results
REPET	no results
sim4_Bot_allest	no results
sim4_Bot_allest4_clctg	no results
sim4_Ss_allest	no results
blastx_uniprot_sprot	no results
blastx_uniprot_trembl	Q96UC3	46378	48555	809	33.09	86.28	n/a	Putative uncharacterized protein 3H10.040 - Neurospora crassa
	Q7RVT4	46378	48555	801	33.97	84.52	n/a	Predicted protein - Neurospora crassa
	A4RHH9	46567	48150	667	33.81	73.61	n/a	Putative uncharacterized protein - Magnaporthe grisea (Rice blast fungus) (Pyricularia grisea)
	A6R813	46828	48159	645	35.61	61.40	n/a	Predicted protein - Ajellomyces capsulata (strain NAm1) (Histoplasma capsulatum)
	Q1DQT4	46843	48156	604	35.28	65.23	n/a	Putative uncharacterized protein - Coccidioides immitis
	Q4WZQ8	46834	48156	635	35.49	60.79	n/a	Telomere-binding alpha subunit central domain protein - Aspergillus fumigatus (Sartorya fumigata)
	A1DIH0	46834	48219	635	34.99	63.46	n/a	Telomere-binding protein alpha subunit central domain putative - Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181) (Aspergillus fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
	Q7Z863	46798	48150	614	37.50	61.24	n/a	Pot1-like protein - Emericella nidulans (Aspergillus nidulans)
blastx_FNG30_prot	SS1G_11471.1	46798	48558	609	65.20	89.66	n/a	sclerotinia_sclerotiorum hypothetical protein translation 610 aa
	jgi:Triree:43789	46378	48246	679	32.57	83.65	n/a	Trichoderma reesei
	FG07140.1	46615	48342	561	33.89	96.26	n/a	fusarium_graminearum hypothetical protein 562 aa
	MGG_07061.5	46567	48150	667	33.81	73.61	n/a	magnaporthe_grisea hypothetical protein translation 668 aa
	CIMG_07329.2	46843	48156	604	35.28	65.23	n/a	Coccidioides immitis hypothetical protein translation 605 aa
	gi:71002528:ref:XP_755945.1:	46834	48156	635	35.49	60.79	n/a	Aspergillus fumigatus Af293 hypothetical protein Afu2g16100
	AN2141	46798	47985	426	36.42	81.22	n/a	Aspergillus nidulans AN2141.3 conserved hypothetical protein translation 427 aa
	NCU01248.2	46378	47253	724	35.74	38.26	n/a	Neurospora crassa hypothetical protein AL513442 conserved hypothetical protein [Neurospora crassa] translation 725 aa
	CHG02682.1	46378	47313	594	36.14	47.98	n/a	Chaetomium globosum hypothetical protein translation 595 aa
	AO090012000188	46834	48159	614	34.32	60.26	n/a	Aspergillus oryzae predicted protein
sim4_B0510_genes	BC1G_08961.1	46125	48561	1791	99.78	100.00	n/a	n/a
sim4_SS_genes	SS1G_11471.1	46195	47368	1830	83.72	32.90	n/a	n/a
blastn_b0510_supercontig	B0510_supercontig_1.50	42353	52144	253584	99.52	n/a	n/a	n/a
blastn_SS_supercontig	SS_supercontig_1.18	46591	47124	983747	81.84	n/a	n/a	n/a
	SS_supercontig_1.18	47210	47552	983747	81.34	n/a	n/a	n/a
	SS_supercontig_1.18	46391	46524	983747	82.09	n/a	n/a	n/a
blat_oligo	botrytisP00093902	46964	47023	60	n/a	n/a	n/a	array_gene:BofuT4_P074910_1 . max_over_threshold:9.86 . min_over_threshold:1.87 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00093903	47064	47123	60	n/a	n/a	n/a	array_gene:BofuT4_P074910_1 . max_over_threshold:10.9 . min_over_threshold:1.9 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00093904	47075	47134	60	n/a	n/a	n/a	array_gene:BofuT4_P074910_1 . max_over_threshold:17.01 . min_over_threshold:3.88 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00093905	47150	47209	60	n/a	n/a	n/a	array_gene:BofuT4_P074910_1 . max_over_threshold:13.25 . min_over_threshold:2.48 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00093907	47587	47646	60	n/a	n/a	n/a	array_gene:BofuT4_P074910_1 . max_over_threshold:24.75 . min_over_threshold:4.67 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00093908	47756	47815	60	n/a	n/a	n/a	array_gene:BofuT4_P074910_1 . max_over_threshold:11.75 . min_over_threshold:1.51 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00093909	47962	48090	60	n/a	n/a	n/a	array_gene:BofuT4_P074910_1 . max_over_threshold:10.39 . min_over_threshold:2.07 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00093910	48180	48239	60	n/a	n/a	n/a	array_gene:BofuT4_P074910_1 . max_over_threshold:2.82 . min_over_threshold:0.59 . percent_hyb_over_threshold:71.42 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00093911	48188	48247	60	n/a	n/a	n/a	array_gene:BofuT4_P074910_1 . max_over_threshold:2.92 . min_over_threshold:0.61 . percent_hyb_over_threshold:60.71 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0

Current manual annotation

Ortholog