GRS - Genome Report System

Botrytis cinerea T4 GRS

Functional annotation

BofuT4_P034190.1

Gene Identifier

DbXrefs

Domain/Motif (Interproscan results)

Localization / Targeting

Predicted function

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	bfu:BC1G_08227	1	545	545	n/a	33.07	1648	91.01	0.37	0.0	similar to polyketide synthase
	pno:SNOG_15829	8	544	537	Gaps:1	30.76	1505	64.58	14.69	1e-155	hypothetical protein
	nfi:NFIA_112240	2	540	539	Gaps:31	31.22	1794	35.89	15.54	1e-89	polyketide synthase putative
	afm:AFUA_4G14560	1	399	399	Gaps:10	22.84	1782	42.75	14.74	2e-88	polyketide synthase
	afm:AFUA_4G00210	1	541	541	Gaps:44	31.04	1775	35.21	18.15	7e-88	polyketide synthase
	nfi:NFIA_045430	1	541	541	Gaps:40	31.12	1777	35.08	18.08	4e-87	polyketide synthase putative
	nfi:NFIA_101810	1	399	399	Gaps:10	22.80	1785	42.01	15.72	1e-86	polyketide synthase putative
	afm:AFUA_7G00160	3	540	538	Gaps:33	31.16	1794	34.53	16.64	5e-85	polyketide synthase (EC:2.3.1.-) K00680 [EC:2.3.1.-]
	nfi:NFIA_101660	3	402	400	Gaps:28	23.06	1821	38.57	20.24	4e-82	polyketide synthase putative
	ani:AN0150.2	1	542	542	Gaps:15	27.30	1806	38.95	18.26	4e-80	hypothetical protein
blastp_uniprot_sprot	sp\|Q03149\|WA_EMENI	1	544	544	Gaps:48	23.64	2157	31.96	19.61	5e-57	Conidial yellow pigment biosynthesis polyketide synthase OS Emericella nidulans GN wA PE 1 SV 2
	sp\|Q12053\|PKSL1_ASPPA	8	534	527	Gaps:42	26.88	2109	24.69	16.05	1e-40	Aflatoxin biosynthesis polyketide synthase OS Aspergillus parasiticus GN pksL1 PE 1 SV 1
	sp\|Q12397\|STCA_EMENI	6	544	539	Gaps:51	25.87	2211	23.60	19.58	1e-39	Putative sterigmatocystin biosynthesis polyketide synthase OS Emericella nidulans GN stcA PE 3 SV 2
blastp_pdb	3hrr_B	87	408	322	Gaps:17	94.66	356	23.44	18.40	4e-17	mol:protein length:356 Aflatoxin biosynthesis polyketide synthase
	3hrr_A	87	408	322	Gaps:17	94.66	356	23.44	18.40	4e-17	mol:protein length:356 Aflatoxin biosynthesis polyketide synthase
	3hrq_B	87	408	322	Gaps:17	94.40	357	23.44	18.40	4e-17	mol:protein length:357 Aflatoxin biosynthesis polyketide synthase
	3hrq_A	87	408	322	Gaps:17	94.40	357	23.44	18.40	4e-17	mol:protein length:357 Aflatoxin biosynthesis polyketide synthase
rpsblast_cdd	gnl\|CDD\|144221	481	544	64	n/a	95.52	67	35.94	18.75	2e-09	pfam00550 PP-binding Phosphopantetheine attachment site. A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Listonella anguillarum angR has the attachment serine replaced by an alanine.
rpsblast_kog	no results

Other analysis

Functional Gbrowse

Structural Gbrowse

Genome Mapping at gene locus

Analysis	Hit name	RefStart	RefEnd	Hit length	Hit identity	Hit coverage	eValue	Hit description
RepeatMasker_ALL_Repbase	no results
TRF	no results
REPET	no results
sim4_Bot_allest	B3BC_116_232_F05	272790	273676	882	97.28	100.00	n/a	B0510 Germinated spores on hydrophobic surfaces library
	B3BC_116_219_D11	272768	273361	594	97.14	100.00	n/a	B0510 Germinated spores on hydrophobic surfaces library
	PD0ABA7YG10FM1	272758	273437	680	100.00	100.00	n/a	BT4 young mycelium library
	PD0ABA39YN07FM1	272534	273350	761	100.00	100.00	n/a	BT4 young mycelium library
	PD0ABA40YN07FM1	272534	272761	173	97.69	100.00	n/a	BT4 young mycelium library
	B3BC_116_212_C11	273885	274043	212	97.52	75.94	n/a	B0510 Germinated spores on hydrophobic surfaces library
	PD0ABA7YG10NM1r	273199	274011	813	100.00	100.00	n/a	BT4 young mycelium library
sim4_Bot_allest4_clctg	CL_bt4_SuperContig_25_1_bt4ctg_0462_001.Contig1_v5	272534	274011	1422	100.00	100.00	n/a	all_lib_clone_nr:5
sim4_Ss_allest	no results
blastx_uniprot_sprot	Q12397	273018	273944	2181	29.91	14.72	n/a	Putative sterigmatocystin biosynthesis polyketide synthase - Emericella nidulans (Aspergillus nidulans)
	Q03149	272185	273944	2157	34.02	24.66	n/a	Conidial yellow pigment biosynthesis polyketide synthase - Emericella nidulans (Aspergillus nidulans)
	Q12053	272215	273914	2109	26.42	27.45	n/a	Aflatoxin biosynthesis polyketide synthase - Aspergillus parasiticus
blastx_uniprot_trembl	Q0TX07	272278	273944	1505	59.63	35.88	n/a	Putative uncharacterized protein - Phaeosphaeria nodorum (Septoria nodorum)
	Q6RKI6	272191	273947	1755	98.94	32.31	n/a	Polyketide synthase - Botryotinia fuckeliana (Noble rot fungus) (Botrytis cinerea)
	Q4WQZ5	272203	273938	1782	40.55	30.86	n/a	Polyketide synthase putative - Aspergillus fumigatus (Sartorya fumigata)
	Q0CV50	272212	273944	1802	37.95	30.85	n/a	Putative uncharacterized protein - Aspergillus terreus (strain NIH 2624)
	A1CVP5	272203	273938	1785	39.60	30.98	n/a	Polyketide synthase putative - Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181) (Aspergillus fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
	Q8TGD6	272212	273944	1802	37.77	30.85	n/a	Polyketide synthase - Aspergillus terreus
	Q0CCY3	272203	273938	1771	39.96	30.94	n/a	Putative uncharacterized protein - Aspergillus terreus (strain NIH 2624)
	A1CVN0	272203	273959	1821	37.39	32.02	n/a	Polyketide synthase putative - Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181) (Aspergillus fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
	Q5BH30	272203	273959	1806	36.81	31.89	n/a	Putative uncharacterized protein - Emericella nidulans (Aspergillus nidulans)
blastx_FNG30_prot	SNU15828.1	272539	273944	573	60.62	78.88	n/a	Stagonospora nodorum hypothetical protein translation
	gi:70993058:ref:XP_751377.1:	272203	273938	1782	40.55	30.86	n/a	Aspergillus fumigatus Af293 polyketide synthase
	gi:70981812:ref:XP_746435.1:	272212	273935	1775	35.75	31.83	n/a	Aspergillus fumigatus Af293 polyketide synthase
	gi:70982770:ref:XP_746913.1:	272185	273932	1794	34.48	32.33	n/a	Aspergillus fumigatus Af293 polyketide synthase type 1
	SNU11981.1	272185	273935	1690	37.75	32.60	n/a	Stagonospora nodorum hypothetical protein similar to polyketide synthase translation
	AN6000	272185	273932	1792	33.33	32.48	n/a	Aspergillus nidulans AN6000.3 conserved hypothetical protein translation 1793 aa
	SS1G_11789.1	272203	273944	2144	31.82	24.63	n/a	sclerotinia_sclerotiorum hypothetical protein similar to polyketide synthase translation 2145 aa
	MGG_07219.5	272185	273944	2175	31.16	24.64	n/a	magnaporthe_grisea hypothetical protein similar to polyketide synthase translation 2176 aa
	gi:71002828:ref:XP_756095.1:	272185	273944	2146	32.39	24.74	n/a	Aspergillus fumigatus Af293 polyketide synthetase PksP
	AN0150	272203	273959	1806	36.81	31.89	n/a	Aspergillus nidulans AN0150.3 hypothetical protein similar to polyketide synthase translation 1807 aa
sim4_B0510_genes	no results
sim4_SS_genes	no results
blastn_b0510_supercontig	B0510_supercontig_1.47	272191	275829	261611	99.20	n/a	n/a	n/a
blastn_SS_supercontig	no results
blat_oligo	botrytisP00062591	272552	272611	60	n/a	n/a	n/a	array_gene:BofuT4_P034190_1 . max_over_threshold:15.68 . min_over_threshold:0.59 . percent_hyb_over_threshold:57.14 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00062592	272719	272778	60	n/a	n/a	n/a	array_gene:BofuT4_P034190_1 . max_over_threshold:9.7 . min_over_threshold:0.47 . percent_hyb_over_threshold:78.57 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00062593	273005	273064	60	n/a	n/a	n/a	array_gene:BofuT4_P034190_1 . max_over_threshold:9 . min_over_threshold:0.33 . percent_hyb_over_threshold:42.85 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00062594	273023	273082	60	n/a	n/a	n/a	array_gene:BofuT4_P034190_1 . max_over_threshold:8.81 . min_over_threshold:0.41 . percent_hyb_over_threshold:39.28 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00062595	273180	273239	60	n/a	n/a	n/a	array_gene:BofuT4_P034190_1 . max_over_threshold:11.04 . min_over_threshold:0.51 . percent_hyb_over_threshold:78.57 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00062596	273329	273388	60	n/a	n/a	n/a	array_gene:BofuT4_P034190_1 . max_over_threshold:18.38 . min_over_threshold:0.52 . percent_hyb_over_threshold:89.28 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00062597	273560	273619	60	n/a	n/a	n/a	array_gene:BofuT4_P034190_1 . max_over_threshold:31.4 . min_over_threshold:0.95 . percent_hyb_over_threshold:96.42 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00062598	273615	273674	60	n/a	n/a	n/a	array_gene:BofuT4_P034190_1 . max_over_threshold:22.16 . min_over_threshold:0.73 . percent_hyb_over_threshold:85.71 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00062599	273698	273757	60	n/a	n/a	n/a	array_gene:BofuT4_P034190_1 . max_over_threshold:14.98 . min_over_threshold:0.6 . percent_hyb_over_threshold:71.42 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0

Current manual annotation

Ortholog