GRS - Genome Report System

Botrytis cinerea T4 GRS

Functional annotation

BofuT4_P026080.1

Gene Identifier

DbXrefs

Domain/Motif (Interproscan results)

Localization / Targeting

Predicted function

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	bfu:BC1G_09638	1	282	282	n/a	100.00	282	85.11	0.00	1e-139	hypothetical protein K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
	ssl:SS1G_14425	1	282	282	Gaps:5	100.00	277	80.51	1.08	1e-126	hypothetical protein K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
	ncr:NCU03936	1	282	282	Gaps:9	97.95	293	61.32	9.06	1e-95	tRNA methyltransferase K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
	pan:PODANSg3031	1	280	280	Gaps:4	99.30	284	59.93	9.22	8e-95	hypothetical protein K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
	pno:SNOG_15087	1	282	282	Gaps:17	99.65	282	57.65	9.96	1e-87	hypothetical protein K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
	yli:YALI0B19558g	8	282	275	Gaps:30	88.70	292	62.16	10.04	1e-86	YALI0B19558p K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
	fgr:FG09283.1	5	265	261	Gaps:12	16.64	1496	61.45	10.84	1e-84	hypothetical protein
	dha:DEHA2B05258g	7	280	274	Gaps:19	88.70	292	57.53	11.97	3e-81	DEHA2B05258p
	ure:UREG_05807	1	282	282	Gaps:58	99.38	322	50.94	10.00	8e-81	similar to m7G tRNA methyltransferase K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
	ctp:CTRG_00433	7	280	274	Gaps:26	87.72	285	60.00	10.80	8e-80	hypothetical protein K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
blastp_uniprot_sprot	sp\|A6S8E7\|TRMB_BOTFB	1	282	282	n/a	100.00	282	85.11	0.00	1e-140	tRNA (guanine-N(7)-)-methyltransferase OS Botryotinia fuckeliana (strain B05.10) GN trm8 PE 3 SV 1
	sp\|Q7RZC1\|TRMB_NEUCR	1	282	282	Gaps:9	97.95	293	61.32	9.06	1e-96	tRNA (guanine-N(7)-)-methyltransferase OS Neurospora crassa GN trm-8 PE 3 SV 1
	sp\|Q5H737\|TRMB_GLOLA	7	282	276	Gaps:6	97.90	286	59.64	10.36	2e-96	tRNA (guanine-N(7)-)-methyltransferase OS Glomerella lagenarium GN TRM8 PE 3 SV 1
	sp\|B2AR91\|TRMB_PODAN	1	280	280	Gaps:4	99.30	284	59.93	9.22	9e-96	tRNA (guanine-N(7)-)-methyltransferase OS Podospora anserina GN TRM8 PE 3 SV 1
	sp\|Q2GS86\|TRMB_CHAGB	6	282	277	Gaps:10	97.27	293	57.54	10.88	9e-92	tRNA (guanine-N(7)-)-methyltransferase OS Chaetomium globosum GN TRM8 PE 3 SV 1
	sp\|Q0TZT0\|TRMB_PHANO	1	282	282	Gaps:17	99.65	282	57.65	9.96	2e-88	tRNA (guanine-N(7)-)-methyltransferase OS Phaeosphaeria nodorum GN TRM8 PE 3 SV 2
	sp\|Q6CE12\|TRMB_YARLI	8	282	275	Gaps:30	88.70	292	62.16	10.04	1e-87	tRNA (guanine-N(7)-)-methyltransferase OS Yarrowia lipolytica GN TRM8 PE 3 SV 1
	sp\|Q6BX78\|TRMB_DEBHA	7	280	274	Gaps:19	88.70	292	57.53	11.97	4e-82	tRNA (guanine-N(7)-)-methyltransferase OS Debaryomyces hansenii GN TRM8 PE 3 SV 2
	sp\|A3LS77\|TRMB_PICST	16	280	265	Gaps:18	82.18	303	56.63	13.65	2e-79	tRNA (guanine-N(7)-)-methyltransferase OS Pichia stipitis GN TRM8 PE 3 SV 1
	sp\|Q74ZK8\|TRMB_ASHGO	1	280	280	Gaps:33	98.94	282	53.41	10.75	2e-79	tRNA (guanine-N(7)-)-methyltransferase OS Ashbya gossypii GN TRM8 PE 3 SV 1
blastp_pdb	2vdu_F	26	280	255	Gaps:17	93.70	254	57.14	10.08	2e-76	mol:protein length:254 TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE
	2vdu_E	26	280	255	Gaps:17	93.70	254	57.14	10.08	2e-76	mol:protein length:254 TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE
	2vdv_F	27	280	254	Gaps:17	96.34	246	57.38	9.70	3e-76	mol:protein length:246 TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE
	2vdv_E	27	280	254	Gaps:17	96.34	246	57.38	9.70	3e-76	mol:protein length:246 TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE
	3ckk_A	43	280	238	Gaps:6	98.72	235	50.86	12.50	9e-62	mol:protein length:235 tRNA (guanine-N(7)-)-methyltransferase
rpsblast_cdd	gnl\|CDD\|145502	96	277	182	Gaps:8	88.44	199	39.77	16.48	2e-48	pfam02390 Methyltransf_4 Putative methyltransferase. This is a family of putative methyltransferases. The aligned region contains the GXGXG S-AdoMet binding site suggesting a putative methyltransferase activity.
	gnl\|CDD\|161703	92	277	186	Gaps:8	91.75	194	29.21	16.85	9e-43	TIGR00091 TIGR00091 tRNA (guanine-N(7)-)-methyltransferase. In E. coli this protein flanks the DNA repair protein MutY also called micA.
	gnl\|CDD\|30569	22	274	253	Gaps:33	96.92	227	25.00	15.45	1e-35	COG0220 COG0220 Predicted S-adenosylmethionine-dependent methyltransferase [General function prediction only].
	gnl\|CDD\|166802	98	264	167	Gaps:15	75.00	216	30.86	16.05	3e-24	PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase Reviewed.
rpsblast_kog	gnl\|CDD\|38325	12	280	269	Gaps:22	99.20	249	59.51	16.60	7e-90	KOG3115 KOG3115 KOG3115 Methyltransferase-like protein [General function prediction only].

Other analysis

Functional Gbrowse

Structural Gbrowse

Genome Mapping at gene locus

Analysis	Hit name	RefStart	RefEnd	Hit length	Hit identity	Hit coverage	eValue	Hit description
RepeatMasker_ALL_Repbase	no results
TRF	no results
REPET	no results
sim4_Bot_allest	PD0AFA14YN06CM1	29786	30591	703	99.86	100.00	n/a	SAS56 X SAS405 apothecia library
sim4_Bot_allest	PD0ACA16YP14FM1	29689	30518	727	100.00	100.00	n/a	BT4 mycelium - pH stress library
sim4_Bot_allest4_clctg	CL_bt4_SuperContig_17_1_bt4ctg_0347_001.Contig1_v5	29689	30591	800	99.88	100.00	n/a	all_lib_clone_nr:2
sim4_Ss_allest	no results
blastx_uniprot_sprot	Q12009	29506	30433	286	56.82	92.31	n/a	tRNA - Saccharomyces cerevisiae (Baker's yeast)
	Q96WV1	29506	30406	273	58.06	90.84	n/a	Probable tRNA - Schizosaccharomyces pombe (Fission yeast)
	Q2YDF1	29506	30388	277	54.15	91.34	n/a	tRNA - Bos taurus (Bovine)
	Q9Z120	29506	30388	268	53.75	94.40	n/a	tRNA - Mus musculus (Mouse)
	Q9UBP6	29506	30367	276	54.25	89.49	n/a	tRNA - Homo sapiens (Human)
	Q23126	29506	30370	256	56.71	90.23	n/a	Probable tRNA - Caenorhabditis elegans
	Q8GXB7	29515	30412	251	52.44	98.01	n/a	Probable tRNA - Arabidopsis thaliana (Mouse-ear cress)
	O77263	29515	30370	256	52.19	89.06	n/a	Probable tRNA - Drosophila melanogaster (Fruit fly)
blastx_uniprot_trembl	Q7RZC1	29500	30448	293	69.34	97.95	n/a	tRNA methyltransferase - Neurospora crassa
	Q6M8Z9	29500	30448	271	73.58	97.79	n/a	Probable t-RNA methyltransferase - Neurospora crassa
	Q5H737	29500	30430	286	65.00	97.90	n/a	M7G tRNA methyltransferase - Glomerella lagenarium (Anthracnose fungus) (Colletotrichum lagenarium)
	Q0TZT0	29500	30448	282	65.12	99.65	n/a	Putative uncharacterized protein - Phaeosphaeria nodorum (Septoria nodorum)
	A2Q9E4	29500	30448	297	59.46	99.66	n/a	Similar to human and mouse proteins - Aspergillus niger
	Q6CE12	29500	30427	292	65.64	88.70	n/a	Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica - Yarrowia lipolytica (Candida lipolytica)
	Q6BX78	29506	30430	292	60.62	88.70	n/a	Similar to CA1422\|IPF14248 Candida albicans IPF14248 putative methyltransferase - Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
	Q6FNR1	29506	30373	285	64.29	83.51	n/a	Similar to tr\|Q12009 Saccharomyces cerevisiae YDL201w TRM8 - Candida glabrata (Yeast) (Torulopsis glabrata)
blastx_FNG30_prot	SS1G_14425.1	29500	30448	277	94.12	98.19	n/a	sclerotinia_sclerotiorum hypothetical protein translation 278 aa
	NCU03936.2	29500	30448	293	69.34	97.95	n/a	Neurospora crassa probable methyltransferase related protein [MIPS] translation 294 aa
	SNU15087.1	29500	30448	291	65.52	99.66	n/a	Stagonospora nodorum hypothetical protein translation
	jgi:Triree:37847	29500	30448	270	68.89	100.00	n/a	Trichoderma reesei
	FG09283.1	28104	30436	1496	63.00	38.30	n/a	fusarium_graminearum hypothetical protein 1497 aa
sim4_B0510_genes	BC1G_09638.1	29497	30448	849	100.00	100.00	n/a	n/a
sim4_SS_genes	SS1G_14425.1	29497	30448	834	89.30	93.05	n/a	n/a
blastn_b0510_supercontig	B0510_supercontig_1.56	28498	30670	240178	99.91	n/a	n/a	n/a
blastn_SS_supercontig	SS_supercontig_1.33	30031	30136	193353	91.51	n/a	n/a	n/a
	SS_supercontig_1.33	30195	30254	193353	93.33	n/a	n/a	n/a
	SS_supercontig_1.33	29492	29982	193353	89.61	n/a	n/a	n/a
	SS_supercontig_1.33	30282	30485	193353	86.76	n/a	n/a	n/a
blat_oligo	botrytisP00056438	30184	30243	60	n/a	n/a	n/a	array_gene:BofuT4_P026080_1 . max_over_threshold:15.6 . min_over_threshold:0.57 . percent_hyb_over_threshold:92.85 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00056439	30173	30232	60	n/a	n/a	n/a	array_gene:BofuT4_P026080_1 . max_over_threshold:8.52 . min_over_threshold:0.68 . percent_hyb_over_threshold:92.85 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00056440	30167	30226	60	n/a	n/a	n/a	array_gene:BofuT4_P026080_1 . max_over_threshold:7.55 . min_over_threshold:0.62 . percent_hyb_over_threshold:92.85 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00056442	29716	29775	60	n/a	n/a	n/a	array_gene:BofuT4_P026080_1 . max_over_threshold:6.87 . min_over_threshold:0.59 . percent_hyb_over_threshold:92.85 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00056443	29713	29772	60	n/a	n/a	n/a	array_gene:BofuT4_P026080_1 . max_over_threshold:5.03 . min_over_threshold:0.55 . percent_hyb_over_threshold:85.71 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00056444	29709	29768	60	n/a	n/a	n/a	array_gene:BofuT4_P026080_1 . max_over_threshold:5.38 . min_over_threshold:0.61 . percent_hyb_over_threshold:82.14 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00056445	29706	29765	60	n/a	n/a	n/a	array_gene:BofuT4_P026080_1 . max_over_threshold:6.38 . min_over_threshold:0.56 . percent_hyb_over_threshold:92.85 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00056446	29703	29762	60	n/a	n/a	n/a	array_gene:BofuT4_P026080_1 . max_over_threshold:7.32 . min_over_threshold:0.7 . percent_hyb_over_threshold:92.85 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00056447	29696	29755	60	n/a	n/a	n/a	array_gene:BofuT4_P026080_1 . max_over_threshold:5.55 . min_over_threshold:0.56 . percent_hyb_over_threshold:85.71 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0

Current manual annotation

Ortholog