GRS - Genome Report System

Botrytis cinerea T4 GRS

Functional annotation

BofuT4_P024020.1

Gene Identifier

DbXrefs

Domain/Motif (Interproscan results)

Localization / Targeting

Predicted function

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	bfu:BC1G_12385	1	310	310	n/a	100.00	310	96.13	0.00	1e-173	hypothetical protein
	ssl:SS1G_08099	1	310	310	Gaps:57	100.00	253	79.05	5.93	1e-103	hypothetical protein
	mgr:MGG_00343	7	285	279	Gaps:3	77.69	363	60.64	18.44	1e-103	MG00343.4 hypothetical protein
	ehi:EHI_155730	23	285	263	Gaps:22	76.47	323	33.60	22.27	2e-32	23.t00009 1-acyl-glycerol-3-phosphate acyltransferase
	edi:EDI_317540	23	285	263	Gaps:22	71.39	346	33.60	21.86	2e-32	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51)
	edi:EDI_032720	58	284	227	Gaps:13	66.46	322	34.11	20.09	5e-31	1-acylglycerol-3-phosphate acyltransferase (EC:2.3.1.51)
	ehi:EHI_097610	58	284	227	Gaps:13	66.46	322	33.64	19.63	8e-29	304.t00005 acyl-CoA:1-acylglycerol-3-phosphate acyltransferase
	pop:POPTR_816499	62	284	223	Gaps:12	56.72	372	33.65	23.22	9e-28	acyltransferase K13513 lysocardiolipin and lysophospholipid acyltransferase [EC:2.3.1.- 2.3.1.51]
	rcu:RCOM_0938140	24	280	257	Gaps:24	71.63	356	32.94	21.18	2e-27	lysophosphatidic acid acyltransferase putative (EC:2.3.1.51) K13513 lysocardiolipin and lysophospholipid acyltransferase [EC:2.3.1.- 2.3.1.51]
	vvi:100241978	62	280	219	Gaps:12	34.97	592	34.30	21.26	4e-26	hypothetical protein LOC100241978 K13513 lysocardiolipin and lysophospholipid acyltransferase [EC:2.3.1.- 2.3.1.51]
blastp_uniprot_sprot	sp\|Q9LHN4\|LPAT5_ARATH	51	280	230	Gaps:15	58.93	375	31.22	21.27	7e-25	Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 5 OS Arabidopsis thaliana GN LPAT5 PE 2 SV 1
	sp\|Q9SYC8\|LPAT3_ARATH	82	285	204	Gaps:11	51.33	376	34.20	22.80	2e-24	1-acyl-sn-glycerol-3-phosphate acyltransferase 3 OS Arabidopsis thaliana GN LPAT3 PE 2 SV 1
	sp\|Q6IWY1\|LPAT2_BRAOL	15	285	271	Gaps:20	68.80	391	30.11	21.19	2e-24	1-acyl-sn-glycerol-3-phosphate acyltransferase 2 OS Brassica oleracea GN LPAT2 PE 2 SV 1
	sp\|Q9XFW4\|LPAT2_BRANA	15	285	271	Gaps:20	68.97	390	29.74	21.19	5e-24	1-acyl-sn-glycerol-3-phosphate acyltransferase 2 OS Brassica napus GN LPAT2 PE 2 SV 1
	sp\|Q8LG50\|LPAT2_ARATH	15	285	271	Gaps:20	69.15	389	29.74	20.07	1e-23	1-acyl-sn-glycerol-3-phosphate acyltransferase 2 OS Arabidopsis thaliana GN LPAT2 PE 1 SV 1
	sp\|Q5R757\|PLCD_PONAB	82	280	199	Gaps:16	49.47	378	39.57	19.25	2e-23	1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS Pongo abelii GN AGPAT4 PE 2 SV 1
	sp\|Q9NRZ5\|PLCD_HUMAN	82	280	199	Gaps:16	49.47	378	39.57	19.25	2e-23	1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS Homo sapiens GN AGPAT4 PE 1 SV 1
	sp\|Q4R581\|PLCD_MACFA	82	281	200	Gaps:16	49.74	378	38.83	19.15	2e-22	1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS Macaca fascicularis GN AGPAT4 PE 2 SV 1
	sp\|Q5E9R2\|PLCD_BOVIN	82	280	199	Gaps:16	49.47	378	38.50	20.86	3e-22	1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS Bos taurus GN AGPAT4 PE 2 SV 1
	sp\|Q6UWP7\|LCLT1_HUMAN	28	284	257	Gaps:9	59.90	414	27.42	18.55	4e-22	Lysocardiolipin acyltransferase 1 OS Homo sapiens GN LCLAT1 PE 1 SV 1
blastp_pdb	no results
rpsblast_cdd	gnl\|CDD\|153252	62	262	201	Gaps:12	98.96	193	37.17	17.28	5e-48	cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as Lysocardiolipin acyltransferase 1 (LCLAT1) or 1-acyl-sn-glycerol-3-phosphate acyltransferase and similar proteins.
	gnl\|CDD\|166151	10	291	282	Gaps:38	71.77	379	31.25	22.06	9e-32	PLN02510 PLN02510 acyltransferase.
	gnl\|CDD\|166021	10	297	288	Gaps:22	75.26	380	32.17	20.63	1e-31	PLN02380 PLN02380 1-acylglycerol-3-phosphate O-acyltransferase.
	gnl\|CDD\|172510	10	297	288	Gaps:50	95.68	301	26.74	17.36	2e-19	PRK14014 PRK14014 putative acyltransferase Provisional.
	gnl\|CDD\|30553	23	184	162	Gaps:7	61.57	255	28.66	18.47	4e-15	COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism].
	gnl\|CDD\|128835	84	184	101	Gaps:4	82.20	118	37.11	15.46	2e-12	smart00563 PlsC Phosphate acyltransferases. Function in phospholipid biosynthesis and have either glycerolphosphate 1-acylglycerolphosphate or 2-acylglycerolphosphoethanolamine acyltransferase activities. Tafazzin the product of the gene mutated in patients with Barth syndrome is a member of this family.
	gnl\|CDD\|110550	70	173	104	Gaps:4	77.27	132	32.35	18.63	2e-12	pfam01553 Acyltransferase Acyltransferase. This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function. This family also includes tafazzin the Barth syndrome gene.
	gnl\|CDD\|153251	68	184	117	Gaps:10	60.33	184	27.93	19.82	1e-11	cd07989 LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT PlsC) Tafazzin (product of Barth syndrome gene) and similar proteins.
	gnl\|CDD\|129621	78	173	96	Gaps:9	68.46	130	26.97	15.73	1e-08	TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases. 1-acyl-sn-glycerol-3-phosphate acyltransferase is also called 1-AGP acyltransferase lysophosphatidic acid acyltransferase and LPA acyltransferase.
rpsblast_kog	gnl\|CDD\|36718	23	297	275	Gaps:21	79.77	346	31.52	21.01	5e-44	KOG1505 KOG1505 KOG1505 Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases [Lipid transport and metabolism].
rpsblast_kog	gnl\|CDD\|38059	55	173	119	Gaps:12	42.39	276	23.08	23.08	6e-07	KOG2848 KOG2848 KOG2848 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism].

Other analysis

Functional Gbrowse

Structural Gbrowse

Genome Mapping at gene locus

Analysis	Hit name	RefStart	RefEnd	Hit length	Hit identity	Hit coverage	eValue	Hit description
RepeatMasker_ALL_Repbase	no results
TRF	no results
REPET	no results
sim4_Bot_allest	YCIA_546144	67913	68551	573	100.00	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCKA_550137	67887	68545	592	99.83	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCMA_553916	67802	68524	657	100.00	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCMA_548865	67802	68524	657	100.00	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCMA_548830	67901	68524	558	100.00	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCMA_548826	67892	68524	570	99.30	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCMA_548352	67962	68524	496	99.80	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCOA_581259	67807	68476	604	99.83	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCOA_578069	67709	68476	702	99.86	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCOA_577936	67831	68476	580	100.00	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCOA_575238	67724	68476	687	99.85	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCKA_564519	68134	68545	412	99.76	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCOA_580156	67973	68476	441	96.60	100.00	n/a	Botrytis cinerea HortResearch libraries
	B5BC_116_286_A12	67668	68535	802	99.38	100.00	n/a	B0510 In planta material
	YCGA_532719	67167	67805	639	100.00	100.00	n/a	Botrytis cinerea HortResearch libraries
	PD0AEA4YJ15CM1	67285	67993	709	99.86	100.00	n/a	BT4 appressoria on teflon library
	PD0AEA10YE15CM1	67385	68138	688	99.85	100.00	n/a	BT4 appressoria on teflon library
	PD0AHA2YN16CM1	67208	67937	730	99.73	100.00	n/a	BT4 appressoria on teflon library
	YCIA_546144	67913	68551	573	100.00	100.00	n/a	Botrytis cinerea HortResearch libraries
sim4_Bot_allest4_clctg	CL_bt4_SuperContig_13_1_bt4ctg_0308_009.Contig1_v5	66642	68535	1828	99.84	100.00	n/a	all_lib_clone_nr:5
sim4_Ss_allest	no results
blastx_uniprot_sprot	no results
blastx_uniprot_trembl	A4RFH4	67587	68531	363	59.80	81.54	n/a	Putative uncharacterized protein - Magnaporthe grisea (Rice blast fungus) (Pyricularia grisea)
blastx_FNG30_prot	MGG_00343.5	67587	68531	363	59.80	81.54	n/a	magnaporthe_grisea hypothetical protein translation 364 aa
	SS1G_08099.1	67554	68549	253	92.09	100.00	n/a	sclerotinia_sclerotiorum hypothetical protein translation 254 aa
	RO3G_03059.1	67590	68228	203	38.30	92.61	n/a	rhizopus_oryzae hypothetical protein translation 204 aa
sim4_B0510_genes	BC1G_12385.1	67551	68549	933	100.00	100.00	n/a	n/a
sim4_SS_genes	SS1G_08099.1	67567	68549	762	87.53	97.90	n/a	n/a
blastn_b0510_supercontig	B0510_supercontig_1.104	51203	68758	157244	99.94	n/a	n/a	n/a
blastn_SS_supercontig	SS_supercontig_1.10	68083	68549	1547569	89.08	n/a	n/a	n/a
blastn_SS_supercontig	SS_supercontig_1.10	67545	68017	1547569	85.62	n/a	n/a	n/a
blat_oligo	botrytisP00054948	68490	68549	60	n/a	n/a	n/a	array_gene:BofuT4_P024020_1 . max_over_threshold:4.07 . min_over_threshold:0.59 . percent_hyb_over_threshold:75 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00054949	68456	68515	60	n/a	n/a	n/a	array_gene:BofuT4_P024020_1 . max_over_threshold:7.7 . min_over_threshold:0.81 . percent_hyb_over_threshold:96.42 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00054950	68286	68345	60	n/a	n/a	n/a	array_gene:BofuT4_P024020_1 . max_over_threshold:59 . min_over_threshold:4.55 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:1
	botrytisP00054952	68257	68316	60	n/a	n/a	n/a	array_gene:BofuT4_P024020_1 . max_over_threshold:59.18 . min_over_threshold:4.99 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00054953	68227	68286	60	n/a	n/a	n/a	array_gene:BofuT4_P024020_1 . max_over_threshold:50.97 . min_over_threshold:4.46 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00054954	68163	68222	60	n/a	n/a	n/a	array_gene:BofuT4_P024020_1 . max_over_threshold:83.45 . min_over_threshold:6.14 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00054955	67949	68074	60	n/a	n/a	n/a	array_gene:BofuT4_P024020_1 . max_over_threshold:56.69 . min_over_threshold:4.32 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00054956	67937	67993	60	n/a	n/a	n/a	array_gene:BofuT4_P024020_1 . max_over_threshold:55.78 . min_over_threshold:5.35 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00054957	67787	67846	60	n/a	n/a	n/a	array_gene:BofuT4_P024020_1 . max_over_threshold:58.35 . min_over_threshold:3.28 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:1

Current manual annotation

Ortholog