GRS - Genome Report System

Botrytis cinerea T4 GRS

Functional annotation

BofuT4_P019290.1

Gene Identifier

DbXrefs

Domain/Motif (Interproscan results)

Localization / Targeting

Predicted function

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	ssl:SS1G_00332	1	389	389	Gaps:3	100.00	386	84.72	7.51	0.0	hypothetical protein
	bfu:BC1G_00799	64	389	326	n/a	99.09	329	100.00	0.00	0.0	hypothetical protein
	ppl:POSPLDRAFT_54928	27	388	362	Gaps:24	92.54	402	58.87	12.90	1e-115	candidate pectin methyl esterase
	aor:AO090020000404	24	389	366	Gaps:15	94.07	388	56.71	13.15	1e-110	hypothetical protein
	afv:AFLA_100100	24	389	366	Gaps:15	94.07	388	56.71	12.88	1e-110	pectin methylesterase putative
	nfi:NFIA_069500	1	387	387	Gaps:14	98.72	392	54.01	13.70	1e-109	pectin methylesterase putative
	afm:AFUA_3G07650	5	387	383	Gaps:14	97.70	392	54.83	13.32	1e-108	pectin methylesterase (EC:3.1.1.11) K01051 pectinesterase [EC:3.1.1.11]
	ani:AN4860.2	9	387	379	Gaps:17	97.69	389	53.95	15.26	1e-105	hypothetical protein
	pno:SNOG_00032	23	389	367	Gaps:39	93.56	357	59.88	13.77	1e-104	hypothetical protein
	afm:AFUA_8G07250	23	386	364	Gaps:20	92.16	408	51.06	14.63	1e-100	pectin methylesterase family protein
blastp_uniprot_sprot	sp\|A2QK82\|PMEA_ASPNC	53	337	285	Gaps:38	79.82	327	32.18	16.48	2e-17	Probable pectinesterase A OS Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN pmeA PE 3 SV 1
	sp\|B8NPS7\|PMEA_ASPFN	53	314	262	Gaps:36	71.60	324	31.90	16.81	2e-15	Probable pectinesterase A OS Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN pmeA PE 3 SV 1
	sp\|Q5B7U0\|PMEA_EMENI	53	314	262	Gaps:30	71.38	325	29.74	17.67	2e-15	Pectinesterase A OS Emericella nidulans GN pmeA PE 1 SV 1
	sp\|Q2UBD9\|PMEA_ASPOR	53	314	262	Gaps:36	71.60	324	31.90	16.81	2e-15	Probable pectinesterase A OS Aspergillus oryzae GN pmeA PE 3 SV 1
	sp\|Q9STY3\|PME33_ARATH	32	342	311	Gaps:50	47.98	594	30.18	16.84	9e-15	Probable pectinesterase/pectinesterase inhibitor 33 OS Arabidopsis thaliana GN PME33 PE 2 SV 1
	sp\|Q4WBT5\|PMEA_ASPFU	53	348	296	Gaps:40	79.63	324	29.07	17.44	1e-14	Probable pectinesterase A OS Aspergillus fumigatus GN pmeA PE 3 SV 1
	sp\|B0Y9F9\|PMEA_ASPFC	53	348	296	Gaps:40	79.63	324	29.07	17.44	1e-14	Probable pectinesterase A OS Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN pmeA PE 3 SV 1
	sp\|A1DBT4\|PMEA_NEOFI	53	348	296	Gaps:40	79.63	324	29.07	18.99	2e-14	Probable pectinesterase A OS Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN pmeA PE 3 SV 1
	sp\|Q9LVQ0\|PME31_ARATH	43	386	344	Gaps:65	93.69	317	30.98	17.17	2e-13	Pectinesterase 31 OS Arabidopsis thaliana GN PME31 PE 1 SV 1
	sp\|P83948\|PME3_CITSI	49	348	300	Gaps:52	46.23	584	30.00	18.52	3e-13	Pectinesterase 3 OS Citrus sinensis PE 1 SV 1
blastp_pdb	2ntq_B	52	356	305	Gaps:52	91.52	342	27.80	15.97	1e-13	mol:protein length:342 Pectinesterase A
	2ntq_A	52	356	305	Gaps:52	91.52	342	27.80	15.97	1e-13	mol:protein length:342 Pectinesterase A
	2ntp_B	52	356	305	Gaps:52	91.52	342	27.80	15.97	1e-13	mol:protein length:342 Pectinesterase A
	2ntp_A	52	356	305	Gaps:52	91.52	342	27.80	15.97	1e-13	mol:protein length:342 Pectinesterase A
	2ntb_B	52	356	305	Gaps:52	91.52	342	27.80	15.97	1e-13	mol:protein length:342 Pectinesterase A
	2ntb_A	52	356	305	Gaps:52	91.52	342	27.80	15.97	1e-13	mol:protein length:342 Pectinesterase A
	1qjv_B	52	356	305	Gaps:52	91.52	342	27.80	15.97	2e-13	mol:protein length:342 PECTIN METHYLESTERASE
	1qjv_A	52	356	305	Gaps:52	91.52	342	27.80	15.97	2e-13	mol:protein length:342 PECTIN METHYLESTERASE
	2nt9_B	52	356	305	Gaps:52	91.52	342	27.48	15.97	1e-12	mol:protein length:342 Pectinesterase A
	2nt9_A	52	356	305	Gaps:52	91.52	342	27.48	15.97	1e-12	mol:protein length:342 Pectinesterase A
rpsblast_cdd	gnl\|CDD\|166073	49	348	300	Gaps:69	85.67	293	34.26	14.74	6e-20	PLN02432 PLN02432 pectinesterase family protein.
	gnl\|CDD\|166121	45	367	323	Gaps:57	82.94	340	33.69	16.31	4e-17	PLN02480 PLN02480 pectinesterase family protein.
	gnl\|CDD\|165954	38	367	330	Gaps:57	49.92	599	29.77	18.73	2e-15	PLN02313 PLN02313 pectin methylesterase.
	gnl\|CDD\|166323	27	348	322	Gaps:65	75.73	379	31.36	14.29	2e-15	PLN02682 PLN02682 pectinesterase family protein.
	gnl\|CDD\|166414	43	348	306	Gaps:65	86.75	317	32.36	16.36	3e-15	PLN02773 PLN02773 pectinesterase family protein.
	gnl\|CDD\|166631	52	348	297	Gaps:47	46.69	574	29.48	16.04	2e-14	PLN02990 PLN02990 pectinesterase family protein.
	gnl\|CDD\|166683	57	348	292	Gaps:58	42.31	624	29.92	15.53	4e-14	PLN03043 PLN03043 pectinesterase family protein Provisional.
	gnl\|CDD\|166574	43	348	306	Gaps:61	52.26	530	26.35	19.86	7e-14	PLN02933 PLN02933 pectinesterase family protein.
	gnl\|CDD\|166138	49	349	301	Gaps:50	80.55	329	29.81	16.60	2e-13	PLN02497 PLN02497 pectinesterase family protein.
	gnl\|CDD\|144621	52	348	297	Gaps:60	89.60	298	31.46	14.61	3e-13	pfam01095 Pectinesterase Pectinesterase.
rpsblast_kog	no results

Other analysis

Functional Gbrowse

Structural Gbrowse

Genome Mapping at gene locus

Analysis	Hit name	RefStart	RefEnd	Hit length	Hit identity	Hit coverage	eValue	Hit description
RepeatMasker_ALL_Repbase	no results
TRF	no results
REPET	no results
sim4_Bot_allest	PD0ABA24YD08FM1	897270	898302	685	100.00	100.00	n/a	BT4 young mycelium library
sim4_Bot_allest4_clctg	PD0ABA24YD08FM1	897270	898302	685	100.00	100.00	n/a	BT4 young mycelium library
sim4_Ss_allest	no results
blastx_uniprot_sprot	no results
blastx_uniprot_trembl	Q2U4C1	896835	898141	388	59.09	85.05	n/a	Predicted protein - Aspergillus oryzae
	Q4WWZ5	896841	898141	392	58.23	83.67	n/a	Pectin methylesterase putative - Aspergillus fumigatus (Sartorya fumigata)
	A1D7T5	896841	898141	392	57.93	83.67	n/a	Pectin methylesterase putative - Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181) (Aspergillus fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
	Q5B3M0	896841	898141	389	57.62	84.32	n/a	Putative uncharacterized protein - Emericella nidulans (Aspergillus nidulans)
	Q4WBP7	896844	898393	408	49.62	95.83	n/a	Pectin methylesterase family protein - Aspergillus fumigatus (Sartorya fumigata)
	A2QEW9	896835	898150	397	53.31	83.63	n/a	Contig An02c0400 complete genome. precursor - Aspergillus niger
	A1DBY3	896844	898393	416	48.85	93.99	n/a	Pectinesterase family protein - Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181) (Aspergillus fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
	Q2U5R4	897051	898141	591	57.94	42.64	n/a	Predicted protein - Aspergillus oryzae
blastx_FNG30_prot	SS1G_00332.1	896835	898408	386	84.94	99.74	n/a	sclerotinia_sclerotiorum hypothetical protein translation 387 aa
	AO090020000404	896835	898141	388	59.09	85.05	n/a	Aspergillus oryzae predicted protein
	gi:71000303:ref:XP_754846.1:	896841	898141	392	58.23	83.67	n/a	Aspergillus fumigatus Af293 pectin methyl esterase
	AN4860	896841	898141	389	57.62	84.32	n/a	Aspergillus nidulans AN4860.3 conserved hypothetical protein translation 390 aa
	gi:70984000:ref:XP_747525.1:	896844	898393	408	49.62	95.83	n/a	Aspergillus fumigatus Af293 hypothetical protein Afu8g07250
	AO090113000039	897051	898141	591	57.94	42.64	n/a	Aspergillus oryzae predicted protein
	SNU00032.1	896835	897645	357	61.79	59.38	n/a	Stagonospora nodorum hypothetical protein translation
	jgi:Phchr1:8580:fgenesh1_pg.C_	896958	898141	418	37.46	77.27	n/a	Phanerochaete chrysosporium
	FG07533.1	896844	897305	163	52.63	81.60	n/a	fusarium_graminearum hypothetical protein 164 aa
sim4_B0510_genes	BC1G_00799.1	896832	898150	990	99.09	100.00	n/a	n/a
sim4_B0510_genes	BC1G_00799.1	896832	898150	990	99.09	100.00	n/a	n/a
sim4_SS_genes	SS1G_00332.1	896935	898008	1161	85.83	63.82	n/a	n/a
sim4_SS_genes	SS1G_00333.1	895825	901632	1626	86.56	57.20	n/a	n/a
blastn_b0510_supercontig	B0510_supercontig_1.2	896826	899338	1005568	99.28	n/a	n/a	n/a
blastn_SS_supercontig	SS_supercontig_1.1	897737	898010	2777073	84.67	n/a	n/a	n/a
	SS_supercontig_1.1	896938	897130	2777073	86.53	n/a	n/a	n/a
	SS_supercontig_1.1	897548	897656	2777073	90.83	n/a	n/a	n/a
	SS_supercontig_1.1	897408	897513	2777073	85.85	n/a	n/a	n/a
	SS_supercontig_1.1	897183	897317	2777073	82.22	n/a	n/a	n/a
blat_oligo	botrytisP00051188	898318	898377	60	n/a	n/a	n/a	array_gene:BofuT4_P019290_1 . max_over_threshold:18.87 . min_over_threshold:1.58 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00051189	898122	898259	60	n/a	n/a	n/a	array_gene:BofuT4_P019290_1 . max_over_threshold:48.49 . min_over_threshold:2.14 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00051190	897988	898110	60	n/a	n/a	n/a	array_gene:BofuT4_P019290_1 . max_over_threshold:37.86 . min_over_threshold:1.97 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00051191	897965	898087	60	n/a	n/a	n/a	array_gene:BofuT4_P019290_1 . max_over_threshold:82.36 . min_over_threshold:2.88 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00051192	897849	897908	60	n/a	n/a	n/a	array_gene:BofuT4_P019290_1 . max_over_threshold:116.21 . min_over_threshold:4.18 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00051193	897566	897625	60	n/a	n/a	n/a	array_gene:BofuT4_P019290_1 . max_over_threshold:135.65 . min_over_threshold:3.05 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00051194	897049	897108	60	n/a	n/a	n/a	array_gene:BofuT4_P019290_1 . max_over_threshold:94.29 . min_over_threshold:2.75 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:1
	botrytisP00051196	896971	897030	60	n/a	n/a	n/a	array_gene:BofuT4_P019290_1 . max_over_threshold:43.27 . min_over_threshold:1.26 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00051197	896885	896944	60	n/a	n/a	n/a	array_gene:BofuT4_P019290_1 . max_over_threshold:5.69 . min_over_threshold:0.56 . percent_hyb_over_threshold:78.57 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0

Current manual annotation

Ortholog