GRS - Genome Report System

Botrytis cinerea B0510 GRS

Functional annotation

BC1G_12274.1

Gene Identifier

Domain/Motif (Interproscan results)

Localization / Targeting

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	bfu:BC1G_12274	1	909	909	n/a	100.00	909	97.25	0.00	0.0	similar to ribonucleoside-diphosphate reductase large chain K10807 ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
	ssl:SS1G_10937	1	909	909	Gaps:1	100.00	910	94.29	1.54	0.0	ribonucleotide reductase large subunit K10807 ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
	mgr:MGG_07000	1	909	909	Gaps:14	100.00	909	77.56	8.69	0.0	MG07000.4 similar to ribonucleoside-diphosphate reductase large chain K10807 ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
	nfi:NFIA_109530	1	909	909	Gaps:50	100.00	859	82.77	7.45	0.0	ribonucleotide reductase large subunit RNR1 putative K10807 ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
	afm:AFUA_4G06690	1	909	909	Gaps:50	100.00	859	82.54	7.57	0.0	ribonucleotide reductase large subunit Rnr1 (EC:1.17.4.1) K10807 ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
	ure:UREG_06803	1	909	909	Gaps:47	100.00	884	81.56	6.56	0.0	ribonucleoside-diphosphate reductase large chain 1 K10807 ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
	cim:CIMG_04098	1	909	909	Gaps:54	100.00	893	80.40	6.72	0.0	similar to ribonucleoside-diphosphate reductase large chain K10807 ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
	act:ACLA_045930	1	909	909	Gaps:52	100.00	859	82.19	6.87	0.0	ribonucleotide reductase large subunit RNR1 putative K10807 ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
	afv:AFLA_113250	1	909	909	Gaps:57	100.00	854	82.32	7.96	0.0	ribonucleotide reductase large subunit Rnr1 putative K10807 ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
	pan:PODANSg6979	7	909	903	Gaps:8	100.00	901	77.69	7.66	0.0	hypothetical protein K10807 ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
blastp_uniprot_sprot	sp\|Q9UW15\|RIR1_NEUCR	1	909	909	Gaps:26	100.00	929	74.92	7.86	0.0	Ribonucleoside-diphosphate reductase large chain OS Neurospora crassa GN rnr-1 PE 1 SV 2
	sp\|P21524\|RIR1_YEAST	1	909	909	Gaps:43	100.00	888	67.45	12.84	0.0	Ribonucleoside-diphosphate reductase large chain 1 OS Saccharomyces cerevisiae GN RNR1 PE 1 SV 2
	sp\|P36602\|RIR1_SCHPO	1	758	758	Gaps:2	93.22	811	76.32	11.90	0.0	Ribonucleoside-diphosphate reductase large chain OS Schizosaccharomyces pombe GN cdc22 PE 1 SV 2
	sp\|P21672\|RIR3_YEAST	1	909	909	Gaps:48	100.00	869	65.25	15.42	0.0	Ribonucleoside-diphosphate reductase large chain 2 OS Saccharomyces cerevisiae GN RNR3 PE 1 SV 4
	sp\|P07742\|RIR1_MOUSE	1	758	758	Gaps:1	95.58	792	72.39	14.00	0.0	Ribonucleoside-diphosphate reductase large subunit OS Mus musculus GN Rrm1 PE 1 SV 1
	sp\|P23921\|RIR1_HUMAN	1	758	758	Gaps:1	95.58	792	72.39	14.27	0.0	Ribonucleoside-diphosphate reductase large subunit OS Homo sapiens GN RRM1 PE 1 SV 1
	sp\|Q5R919\|RIR1_PONAB	1	758	758	Gaps:1	95.58	792	72.13	14.40	0.0	Ribonucleoside-diphosphate reductase large subunit OS Pongo abelii GN RRM1 PE 2 SV 1
	sp\|P79732\|RIR1_DANRE	1	758	758	Gaps:1	95.34	794	70.94	13.61	0.0	Ribonucleoside-diphosphate reductase large subunit OS Danio rerio GN rrm1 PE 2 SV 1
	sp\|Q03604\|RIR1_CAEEL	2	758	757	Gaps:1	95.94	788	69.31	14.55	0.0	Ribonucleoside-diphosphate reductase large subunit OS Caenorhabditis elegans GN rnr-1 PE 1 SV 1
	sp\|P48591\|RIR1_DROME	1	756	756	Gaps:1	92.98	812	68.21	14.57	0.0	Ribonucleoside-diphosphate reductase large subunit OS Drosophila melanogaster GN RnrL PE 1 SV 2
blastp_pdb	3k8t_A	1	909	909	Gaps:43	100.00	888	67.45	12.84	0.0	mol:protein length:888 Ribonucleoside-diphosphate reductase large ch
	2zlg_A	1	909	909	Gaps:43	100.00	888	67.45	12.84	0.0	mol:protein length:888 Ribonucleoside-diphosphate reductase large ch
	2zlf_A	1	909	909	Gaps:43	100.00	888	67.45	12.84	0.0	mol:protein length:888 Ribonucleoside-diphosphate reductase large ch
	2eud_A	1	909	909	Gaps:43	100.00	888	67.45	12.84	0.0	mol:protein length:888 Ribonucleoside-diphosphate reductase large ch
	2cvy_A	1	909	909	Gaps:43	100.00	888	67.45	12.84	0.0	mol:protein length:888 Ribonucleoside-diphosphate reductase large ch
	2cvx_A	1	909	909	Gaps:43	100.00	888	67.45	12.84	0.0	mol:protein length:888 Ribonucleoside-diphosphate reductase large ch
	2cvw_A	1	909	909	Gaps:43	100.00	888	67.45	12.84	0.0	mol:protein length:888 Ribonucleoside-diphosphate reductase large ch
	2cvv_A	1	909	909	Gaps:43	100.00	888	67.45	12.84	0.0	mol:protein length:888 Ribonucleoside-diphosphate reductase large ch
	2cvu_A	1	909	909	Gaps:43	100.00	888	67.45	12.84	0.0	mol:protein length:888 Ribonucleoside-diphosphate reductase large ch
	2cvt_A	1	909	909	Gaps:43	100.00	888	67.45	12.84	0.0	mol:protein length:888 Ribonucleoside-diphosphate reductase large ch
rpsblast_cdd	gnl\|CDD\|166078	1	758	758	Gaps:61	96.19	762	68.08	12.55	0.0	PLN02437 PLN02437 ribonucleoside-diphosphate reductase.
	gnl\|CDD\|145819	215	740	526	Gaps:22	100.00	516	55.62	18.02	0.0	pfam02867 Ribonuc_red_lgC Ribonucleotide reductase barrel domain.
	gnl\|CDD\|153088	167	742	576	Gaps:128	100.00	460	60.00	15.87	0.0	cd01679 RNR_I Class I ribonucleotide reductase. Ribonucleotide reductase (RNR) catalyzes the reductive synthesis of deoxyribonucleotides from their corresponding ribonucleotides. It provides the precursors necessary for DNA synthesis. RNRs are separated into three classes based on their metallocofactor usage. Class I RNRs found in eukaryotes bacteria and many viruses use a diiron-tyrosyl radical. Class II RNRs found in bacteria bacteriophage algae and archaea use coenzyme B12 (adenosylcobalamin AdoCbl). Class III RNRs found in anaerobic bacteria bacteriophages and archaea use an FeS cluster and S-adenosylmethionine to generate a glycyl radical. Many organisms have more than one class of RNR present in their genomes. All three RNRs have a ten-stranded alpha-beta barrel domain that is structurally similar to the domain of PFL (pyruvate formate lyase). Class I RNR is oxygen-dependent and can be subdivided into classes Ia (eukaryotes prokaryotes viruses and phages) and Ib (which is found in prokaryotes only). It is a tetrameric enzyme of two alpha and two beta subunits this model covers the major part of the alpha or large subunit called R1 in class Ia and R1E in class Ib.
	gnl\|CDD\|162894	145	742	598	Gaps:26	99.84	617	45.62	17.69	0.0	TIGR02506 NrdE_NrdA ribonucleoside-diphosphate reductase alpha subunit. This model identifies RNR's in diverse clades of bacteria eukaryotes as well as numerous DNA viruses and phage.
	gnl\|CDD\|168859	7	746	740	Gaps:36	78.26	966	40.21	17.72	1e-179	PRK07207 PRK07207 ribonucleotide-diphosphate reductase subunit alpha Validated.
	gnl\|CDD\|73173	39	757	719	Gaps:104	99.69	651	37.90	18.18	1e-156	COG0209 NrdA Ribonucleotide reductase alpha subunit [Nucleotide transport and metabolism].
	gnl\|CDD\|171440	3	747	745	Gaps:58	72.75	1046	37.45	18.79	1e-145	PRK12365 PRK12365 ribonucleotide-diphosphate reductase subunit alpha Provisional.
	gnl\|CDD\|135947	3	821	819	Gaps:60	99.39	822	33.66	17.75	1e-128	PRK06539 PRK06539 ribonucleotide-diphosphate reductase subunit alpha Validated.
	gnl\|CDD\|169717	7	742	736	Gaps:103	96.59	763	32.84	17.77	1e-110	PRK09209 PRK09209 ribonucleotide-diphosphate reductase subunit alpha Validated.
	gnl\|CDD\|168807	3	742	740	Gaps:107	97.77	764	30.52	19.41	1e-106	PRK07088 PRK07088 ribonucleotide-diphosphate reductase subunit alpha Validated.
rpsblast_kog	gnl\|CDD\|36328	1	758	758	Gaps:1	95.10	796	76.22	11.76	0.0	KOG1112 KOG1112 KOG1112 Ribonucleotide reductase alpha subunit [Nucleotide transport and metabolism].

Other analysis

Functional Gbrowse

Ortholog