GRS - Genome Report System

Botrytis cinerea B0510 GRS

Functional annotation

BC1G_08983.1

Gene Identifier

Domain/Motif (Interproscan results)

Localization / Targeting

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	bfu:BC1G_08983	1	310	310	n/a	100.00	310	94.84	0.00	1e-173	similar to spermidine synthase K00797 spermidine synthase [EC:2.5.1.16]
	ssl:SS1G_10282	26	310	285	n/a	97.60	292	92.28	1.40	1e-154	similar to spermidine synthase K00797 spermidine synthase [EC:2.5.1.16]
	pno:SNOG_10727	26	310	285	n/a	97.60	292	78.25	8.42	1e-134	hypothetical protein K00797 spermidine synthase [EC:2.5.1.16]
	act:ACLA_021940	26	309	284	n/a	96.93	293	78.17	5.99	1e-131	spermidine synthase K00797 spermidine synthase [EC:2.5.1.16]
	pan:PODANSg8881	25	310	286	n/a	97.95	292	77.97	6.99	1e-131	hypothetical protein K00797 spermidine synthase [EC:2.5.1.16]
	afm:AFUA_1G13490	26	309	284	n/a	96.93	293	78.17	5.99	1e-131	spermidine synthase (EC:2.5.1.16) K00797 spermidine synthase [EC:2.5.1.16]
	ncr:NCU06727	26	310	285	Gaps:1	97.59	291	78.17	7.75	1e-129	spermidine synthase K00797 spermidine synthase [EC:2.5.1.16]
	ure:UREG_04563	26	310	285	n/a	97.60	292	75.79	9.82	1e-129	spermidine synthase K00797 spermidine synthase [EC:2.5.1.16]
	mgr:MGG_06197	21	310	290	Gaps:1	86.53	334	76.12	8.65	1e-129	MG06197.4 spermidine synthase K00797 spermidine synthase [EC:2.5.1.16]
	nfi:NFIA_012010	26	309	284	Gaps:1	96.92	292	78.09	6.36	1e-129	spermidine synthase K00797 spermidine synthase [EC:2.5.1.16]
blastp_uniprot_sprot	sp\|Q9Y8H7\|SPEE_NEUCR	26	310	285	Gaps:1	97.59	291	78.17	7.75	1e-130	Spermidine synthase OS Neurospora crassa GN spe-3 PE 3 SV 1
	sp\|Q09741\|SPEE_SCHPO	27	306	280	Gaps:1	93.62	298	70.97	8.96	1e-115	Spermidine synthase OS Schizosaccharomyces pombe GN SPBC12C2.07c PE 2 SV 1
	sp\|Q12074\|SPEE_YEAST	26	309	284	Gaps:2	96.93	293	70.77	8.45	1e-112	Spermidine synthase OS Saccharomyces cerevisiae GN SPE3 PE 1 SV 1
	sp\|P19623\|SPEE_HUMAN	26	309	284	Gaps:2	94.04	302	54.23	18.31	7e-90	Spermidine synthase OS Homo sapiens GN SRM PE 1 SV 1
	sp\|Q64674\|SPEE_MOUSE	26	309	284	Gaps:2	94.04	302	53.17	19.01	1e-88	Spermidine synthase OS Mus musculus GN Srm PE 2 SV 1
	sp\|Q9XY92\|SPEE_DICDI	25	309	285	Gaps:4	98.94	284	52.67	16.37	6e-84	Spermidine synthase OS Dictyostelium discoideum GN spsA PE 3 SV 2
	sp\|Q12455\|SPSY_YEAST	27	310	284	Gaps:8	96.67	300	49.66	17.59	2e-76	Spermine synthase OS Saccharomyces cerevisiae GN SPE4 PE 1 SV 1
	sp\|Q96557\|SPD2_DATST	25	310	286	Gaps:7	91.80	317	45.70	20.96	3e-73	Spermidine synthase 2 OS Datura stramonium PE 2 SV 1
	sp\|Q9ZS45\|SPDE_SOLLC	25	310	286	Gaps:7	85.09	342	45.02	22.68	6e-73	Spermidine synthase OS Solanum lycopersicum GN SPDSYN PE 2 SV 1
	sp\|O48658\|SPD1_HYONI	25	310	286	Gaps:7	92.38	315	45.02	21.65	5e-72	Spermidine synthase 1 OS Hyoscyamus niger PE 2 SV 1
blastp_pdb	2o0l_B	26	309	284	Gaps:2	93.42	304	54.23	18.31	9e-91	mol:protein length:304 Spermidine synthase
	2o0l_A	26	309	284	Gaps:2	93.42	304	54.23	18.31	9e-91	mol:protein length:304 Spermidine synthase
	2o07_B	26	309	284	Gaps:2	93.42	304	54.23	18.31	9e-91	mol:protein length:304 Spermidine synthase
	2o07_A	26	309	284	Gaps:2	93.42	304	54.23	18.31	9e-91	mol:protein length:304 Spermidine synthase
	2o06_B	26	309	284	Gaps:2	93.42	304	54.23	18.31	9e-91	mol:protein length:304 Spermidine synthase
	2o06_A	26	309	284	Gaps:2	93.42	304	54.23	18.31	9e-91	mol:protein length:304 Spermidine synthase
	2o05_B	26	309	284	Gaps:2	93.42	304	54.23	18.31	9e-91	mol:protein length:304 Spermidine synthase
	2o05_A	26	309	284	Gaps:2	93.42	304	54.23	18.31	9e-91	mol:protein length:304 Spermidine synthase
	2b2c_B	33	310	278	Gaps:2	88.54	314	53.96	19.06	1e-87	mol:protein length:314 spermidine synthase
	2b2c_A	33	310	278	Gaps:2	88.54	314	53.96	19.06	1e-87	mol:protein length:314 spermidine synthase
rpsblast_cdd	gnl\|CDD\|161869	31	304	274	Gaps:4	100.00	270	56.67	13.33	1e-118	TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
	gnl\|CDD\|166680	26	309	284	Gaps:7	94.14	307	55.02	17.99	1e-117	PLN03040 PLN03040 spermidine synthase Provisional.
	gnl\|CDD\|144964	30	267	238	Gaps:1	98.75	240	59.07	13.08	1e-101	pfam01564 Spermine_synth Spermine/spermidine synthase. Spermine and spermidine are polyamines. This family includes spermidine synthase that catalyses the fifth (last) step in the biosynthesis of spermidine from arginine and spermine synthase.
	gnl\|CDD\|167071	30	310	281	Gaps:19	98.94	283	45.71	15.36	2e-95	PRK00811 PRK00811 spermidine synthase Provisional.
	gnl\|CDD\|30770	27	310	284	Gaps:3	99.65	282	44.84	17.08	6e-85	COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism].
	gnl\|CDD\|166007	27	306	280	Gaps:32	83.57	359	45.33	19.67	8e-81	PLN02366 PLN02366 spermidine synthase.
	gnl\|CDD\|166681	30	260	231	Gaps:3	69.67	333	47.41	25.00	3e-72	PLN03041 PLN03041 spermidine synthase 1 Provisional.
	gnl\|CDD\|166464	31	310	280	Gaps:24	87.85	321	30.85	21.63	7e-43	PLN02823 PLN02823 spermine synthase.
	gnl\|CDD\|167560	51	217	167	Gaps:5	32.76	519	33.53	19.41	4e-34	PRK03612 PRK03612 spermidine synthase Provisional.
	gnl\|CDD\|33985	51	301	251	Gaps:21	48.03	508	29.92	20.90	2e-28	COG4262 COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only].
rpsblast_kog	gnl\|CDD\|36775	26	309	284	Gaps:10	86.65	337	59.59	10.27	1e-110	KOG1562 KOG1562 KOG1562 Spermidine synthase [Amino acid transport and metabolism].

Other analysis

Functional Gbrowse

Ortholog