GRS - Genome Report System

Botrytis cinerea B0510 GRS

Functional annotation

BC1G_04258.1

Gene Identifier

Domain/Motif (Interproscan results)

Localization / Targeting

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	bfu:BC1G_04258	1	871	871	n/a	100.00	871	88.06	0.00	0.0	hypothetical protein
	ssl:SS1G_10712	3	871	869	Gaps:5	96.46	904	80.62	3.90	0.0	hypothetical protein
	ncr:NCU08499	167	869	703	Gaps:68	72.03	926	63.57	11.99	0.0	hypothetical protein
	fgr:FG00632.1	169	870	702	Gaps:55	68.44	995	60.79	13.66	0.0	hypothetical protein
	pno:SNOG_07506	43	865	823	Gaps:70	92.54	885	53.24	13.55	0.0	hypothetical protein
	pan:PODANSg6610	169	867	699	Gaps:57	73.90	885	61.62	14.98	0.0	hypothetical protein
	nfi:NFIA_105480	5	869	865	Gaps:70	98.51	870	49.24	15.05	0.0	GTPase activating protein (Gyp5) putative
	afm:AFUA_4G10600	5	869	865	Gaps:70	98.51	870	49.12	14.94	0.0	GTPase activating protein (Gyp5)
	mgr:MGG_03253	169	870	702	Gaps:60	75.33	900	57.23	14.60	0.0	MG03253.4 hypothetical protein
	aor:AO090003001152	3	869	867	Gaps:65	98.84	864	50.00	12.30	0.0	Rab6 GTPase activator GAPCenA and related TBC domain proteins
blastp_uniprot_sprot	sp\|Q755I4\|GYP5_ASHGO	338	855	518	Gaps:32	55.61	829	38.83	18.87	2e-63	GTPase-activating protein GYP5 OS Ashbya gossypii GN GYP5 PE 3 SV 1
	sp\|Q12344\|GYP5_YEAST	482	843	362	Gaps:33	41.50	894	37.47	17.25	9e-58	GTPase-activating protein GYP5 OS Saccharomyces cerevisiae GN GYP5 PE 1 SV 1
	sp\|Q10496\|YDG9_SCHPO	505	865	361	Gaps:24	33.07	1031	31.67	23.46	8e-45	TBC domain-containing protein C26F1.09 OS Schizosaccharomyces pombe GN SPAC26F1.09 PE 2 SV 1
	sp\|A2AWA9\|RBGP1_MOUSE	482	775	294	Gaps:36	24.81	1064	39.02	19.70	5e-41	Rab GTPase-activating protein 1 OS Mus musculus GN Rabgap1 PE 2 SV 1
	sp\|Q96CN4\|EVI5L_HUMAN	481	754	274	Gaps:33	31.36	794	38.55	19.28	4e-38	EVI5-like protein OS Homo sapiens GN EVI5L PE 1 SV 1
	sp\|Q9Y3P9\|RBGP1_HUMAN	482	775	294	Gaps:36	24.70	1069	39.39	19.70	4e-38	Rab GTPase-activating protein 1 OS Homo sapiens GN RABGAP1 PE 1 SV 3
	sp\|Q5RAN1\|RBGP1_PONAB	482	775	294	Gaps:36	24.70	1069	39.39	19.70	5e-38	Rab GTPase-activating protein 1 OS Pongo abelii GN RABGAP1 PE 2 SV 1
	sp\|O60447\|EVI5_HUMAN	481	754	274	Gaps:33	30.74	810	38.15	19.28	2e-37	Ecotropic viral integration site 5 protein homolog OS Homo sapiens GN EVI5 PE 1 SV 2
	sp\|Q5RCW6\|RBG1L_PONAB	481	658	178	Gaps:2	21.60	815	43.75	15.91	1e-36	Rab GTPase-activating protein 1-like OS Pongo abelii GN RABGAP1L PE 2 SV 1
	sp\|Q5R372\|RBG1L_HUMAN	481	658	178	Gaps:2	21.60	815	43.75	15.91	1e-36	Rab GTPase-activating protein 1-like OS Homo sapiens GN RABGAP1L PE 1 SV 1
blastp_pdb	3hzj_C	503	658	156	n/a	50.32	310	44.87	17.95	1e-34	mol:protein length:310 RAB GTPase-activating protein 1-like
	3hzj_B	503	658	156	n/a	50.32	310	44.87	17.95	1e-34	mol:protein length:310 RAB GTPase-activating protein 1-like
	3hzj_A	503	658	156	n/a	50.32	310	44.87	17.95	1e-34	mol:protein length:310 RAB GTPase-activating protein 1-like
	2qq8_A	496	659	164	Gaps:1	48.80	334	28.83	16.56	1e-14	mol:protein length:334 TBC1 domain family member 14
rpsblast_cdd	gnl\|CDD\|144233	456	647	192	Gaps:4	93.20	206	36.46	19.27	2e-49	pfam00566 TBC TBC domain. Identification of a TBC domain in GYP6_YEAST and GYP7_YEAST which are GTPase activator proteins of yeast Ypt6 and Ypt7 imply that these domains are GTPase activator proteins of Rab-like small GTPases.
	gnl\|CDD\|128466	482	629	148	Gaps:9	75.88	199	46.36	18.54	2e-39	smart00164 TBC Domain in Tre-2 BUB2p and Cdc16p. Probable Rab-GAPs. Widespread domain present in Gyp6 and Gyp7 thereby giving rise to the notion that it performs a GTP-activator activity on Rab-like GTPases.
	gnl\|CDD\|34807	503	724	222	Gaps:13	42.54	496	34.60	17.06	1e-33	COG5210 COG5210 GTPase-activating protein [General function prediction only].
	gnl\|CDD\|31389	712	871	160	Gaps:4	27.52	1163	25.94	24.06	4e-10	COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning].
	gnl\|CDD\|165506	100	338	239	Gaps:48	7.33	3151	26.84	7.79	1e-09	PHA03247 PHA03247 large tegument protein UL36 Provisional.
	gnl\|CDD\|165504	104	337	234	Gaps:99	7.37	3243	28.45	7.53	8e-09	PHA03245 PHA03245 large tegument protein UL36 Provisional.
	gnl\|CDD\|162739	714	871	158	Gaps:29	26.63	1179	30.89	26.43	2e-08	TIGR02168 SMC_prok_B chromosome segregation protein SMC common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria archaea and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle.
	gnl\|CDD\|162740	710	871	162	Gaps:5	24.48	1164	24.21	26.32	9e-08	TIGR02169 SMC_prok_A chromosome segregation protein SMC primarily archaeal type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria archaea and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes but six paralogs (excluded from this family) are found in eukarotes where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex Synechocystis etc) the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved but the central hinge region is skewed in composition and highly divergent.
rpsblast_kog	gnl\|CDD\|36318	465	667	203	Gaps:2	50.63	397	36.32	16.42	3e-29	KOG1102 KOG1102 KOG1102 Rab6 GTPase activator GAPCenA and related TBC domain proteins [General function prediction only].
	gnl\|CDD\|39637	470	858	389	Gaps:26	57.49	948	30.46	14.86	6e-29	KOG4436 KOG4436 KOG4436 Predicted GTPase activator NB4S/EVI5 (contains TBC domain)/Calmodulin-binding protein Pollux (contains PTB and TBC domains) [General function prediction only].
	gnl\|CDD\|37269	454	661	208	Gaps:5	47.02	436	27.80	17.56	3e-23	KOG2058 KOG2058 KOG2058 Ypt/Rab GTPase activating protein [Intracellular trafficking secretion and vesicular transport].
	gnl\|CDD\|37434	454	663	210	Gaps:6	35.84	586	29.52	18.57	3e-22	KOG2223 KOG2223 KOG2223 Uncharacterized conserved protein contains TBC domain [Signal transduction mechanisms General function prediction only].
	gnl\|CDD\|39767	513	634	122	Gaps:19	37.03	370	29.20	22.63	1e-15	KOG4567 KOG4567 KOG4567 GTPase-activating protein [General function prediction only].
	gnl\|CDD\|36309	472	671	200	Gaps:6	28.14	725	26.96	17.16	2e-12	KOG1093 KOG1093 KOG1093 Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only].
	gnl\|CDD\|39548	504	672	169	Gaps:2	24.89	671	30.54	14.37	8e-12	KOG4347 KOG4347 KOG4347 GTPase-activating protein VRP [General function prediction only].
	gnl\|CDD\|37433	455	640	186	Gaps:3	21.82	848	27.03	16.76	6e-09	KOG2222 KOG2222 KOG2222 Uncharacterized conserved protein contains TBC SH3 and RUN domains [Signal transduction mechanisms General function prediction only].
	gnl\|CDD\|37806	522	668	147	Gaps:8	38.23	395	28.48	19.87	2e-08	KOG2595 KOG2595 KOG2595 Predicted GTPase activator protein [Signal transduction mechanisms].
	gnl\|CDD\|36189	688	869	182	Gaps:16	14.80	1243	28.26	21.20	5e-08	KOG0971 KOG0971 KOG0971 Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control cell division chromosome partitioning Cytoskeleton].

Other analysis

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Ortholog