GRS - Genome Report System

Botrytis cinerea B0510 GRS

Functional annotation

BC1G_03627.1

Gene Identifier

Domain/Motif (Interproscan results)

Localization / Targeting

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	bfu:BC1G_03627	1	124	124	n/a	100.00	124	100.00	0.00	5e-67	ATP-dependent Clp protease proteolytic subunit K01358 ATP-dependent Clp protease protease subunit [EC:3.4.21.92]
	ssl:SS1G_12432	1	124	124	n/a	62.63	198	96.77	0.81	1e-64	hypothetical protein K01358 ATP-dependent Clp protease protease subunit [EC:3.4.21.92]
	ure:UREG_07668	1	123	123	n/a	55.41	222	80.49	8.94	3e-53	clp protease K01358 ATP-dependent Clp protease protease subunit [EC:3.4.21.92]
	cim:CIMG_07618	1	115	115	n/a	48.52	237	82.61	11.30	3e-53	ATP-dependent Clp protease proteolytic subunit K01358 ATP-dependent Clp protease protease subunit [EC:3.4.21.92]
	aor:AO090005001444	1	115	115	Gaps:2	43.82	267	84.62	6.84	4e-52	ATP-dependent Clp protease proteolytic subunit K01358 ATP-dependent Clp protease protease subunit [EC:3.4.21.92]
	afv:AFLA_086760	1	115	115	Gaps:2	45.70	256	84.62	6.84	9e-52	ATP-dependent Clp protease proteolytic subunit ClpP K01358 ATP-dependent Clp protease protease subunit [EC:3.4.21.92]
	act:ACLA_036310	1	115	115	Gaps:2	45.70	256	83.76	5.98	2e-51	Clp protease putative K01358 ATP-dependent Clp protease protease subunit [EC:3.4.21.92]
	ang:An02g11960	1	119	119	Gaps:2	48.21	251	79.34	9.09	6e-51	hypothetical protein K01358 ATP-dependent Clp protease protease subunit [EC:3.4.21.92]
	afm:AFUA_3G08330	1	115	115	Gaps:2	66.86	175	82.91	7.69	6e-51	ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92) K01358 ATP-dependent Clp protease protease subunit [EC:3.4.21.92]
	nfi:NFIA_068790	1	115	115	Gaps:2	66.86	175	82.91	6.84	1e-50	Clp protease putative K01358 ATP-dependent Clp protease protease subunit [EC:3.4.21.92]
blastp_uniprot_sprot	sp\|Q5PBD0\|CLPP_ANAMM	1	115	115	Gaps:2	52.56	215	64.60	16.81	5e-38	ATP-dependent Clp protease proteolytic subunit OS Anaplasma marginale (strain St. Maries) GN clpP PE 3 SV 1
	sp\|B9KHZ4\|CLPP_ANAMF	1	115	115	Gaps:2	52.56	215	64.60	16.81	5e-38	ATP-dependent Clp protease proteolytic subunit OS Anaplasma marginale (strain Florida) GN clpP PE 3 SV 1
	sp\|B3CLB1\|CLPP_WOLPP	1	116	116	Gaps:2	54.81	208	63.16	16.67	2e-37	ATP-dependent Clp protease proteolytic subunit OS Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN clpP PE 3 SV 1
	sp\|Q5GS83\|CLPP_WOLTR	1	116	116	Gaps:2	54.81	208	63.16	16.67	3e-37	ATP-dependent Clp protease proteolytic subunit OS Wolbachia sp. subsp. Brugia malayi (strain TRS) GN clpP PE 3 SV 1
	sp\|Q73I59\|CLPP_WOLPM	1	115	115	Gaps:2	54.33	208	63.72	15.93	6e-37	ATP-dependent Clp protease proteolytic subunit OS Wolbachia pipientis wMel GN clpP PE 3 SV 1
	sp\|C0R2W3\|CLPP_WOLWR	1	115	115	Gaps:2	54.33	208	63.72	15.93	6e-37	ATP-dependent Clp protease proteolytic subunit OS Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN clpP PE 3 SV 1
	sp\|A8GSH5\|CLPP_RICRS	1	116	116	Gaps:2	56.72	201	61.40	15.79	2e-36	ATP-dependent Clp protease proteolytic subunit OS Rickettsia rickettsii (strain Sheila Smith) GN clpP PE 3 SV 1
	sp\|C4K1D4\|CLPP_RICPU	1	116	116	Gaps:2	56.72	201	61.40	15.79	2e-36	ATP-dependent Clp protease proteolytic subunit OS Rickettsia peacockii (strain Rustic) GN clpP PE 3 SV 1
	sp\|Q92HM5\|CLPP_RICCN	1	116	116	Gaps:2	56.72	201	61.40	15.79	2e-36	ATP-dependent Clp protease proteolytic subunit OS Rickettsia conorii GN clpP PE 3 SV 2
	sp\|Q4ULF0\|CLPP_RICFE	1	116	116	Gaps:2	56.72	201	61.40	16.67	2e-36	ATP-dependent Clp protease proteolytic subunit OS Rickettsia felis GN clpP PE 3 SV 1
blastp_pdb	1yg8_B	1	115	115	Gaps:2	58.55	193	62.83	13.27	2e-35	mol:protein length:193 ATP-dependent Clp protease proteolytic subuni
	1yg8_A	1	115	115	Gaps:2	58.55	193	62.83	13.27	2e-35	mol:protein length:193 ATP-dependent Clp protease proteolytic subuni
	1yg8_b	1	115	115	Gaps:2	58.55	193	62.83	13.27	2e-35	mol:protein length:193 ATP-dependent Clp protease proteolytic subuni
	1yg8_a	1	115	115	Gaps:2	58.55	193	62.83	13.27	2e-35	mol:protein length:193 ATP-dependent Clp protease proteolytic subuni
	1yg8_Z	1	115	115	Gaps:2	58.55	193	62.83	13.27	2e-35	mol:protein length:193 ATP-dependent Clp protease proteolytic subuni
	1yg8_Y	1	115	115	Gaps:2	58.55	193	62.83	13.27	2e-35	mol:protein length:193 ATP-dependent Clp protease proteolytic subuni
	1yg8_X	1	115	115	Gaps:2	58.55	193	62.83	13.27	2e-35	mol:protein length:193 ATP-dependent Clp protease proteolytic subuni
	1yg8_W	1	115	115	Gaps:2	58.55	193	62.83	13.27	2e-35	mol:protein length:193 ATP-dependent Clp protease proteolytic subuni
	1yg8_V	1	115	115	Gaps:2	58.55	193	62.83	13.27	2e-35	mol:protein length:193 ATP-dependent Clp protease proteolytic subuni
	1yg8_U	1	115	115	Gaps:2	58.55	193	62.83	13.27	2e-35	mol:protein length:193 ATP-dependent Clp protease proteolytic subuni
rpsblast_cdd	gnl\|CDD\|166883	1	116	116	Gaps:2	57.00	200	56.14	20.18	1e-53	PRK00277 clpP ATP-dependent Clp protease proteolytic subunit Reviewed.
	gnl\|CDD\|132928	1	111	111	Gaps:2	63.74	171	59.63	17.43	9e-48	cd07017 S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-dependent highly conserved serine protease. Clp protease (caseinolytic protease ClpP Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota but seems to be absent in archaea mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components both of which are required for effective levels of protease activity in the presence of ATP although the proteolytic subunit alone does possess some catalytic activity. Active site consists of the triad Ser His and Asp some members have lost all of these active site residues and are therefore inactive while others may have one or two large insertions. ClpP seems to prefer hydrophobic or non-polar residues at P1 or P1' positions in its substrate. The protease exists as a tetradecamer made up of two heptameric rings stacked back-to-back such that the catalytic triad of each subunit is located at the interface between three monomers thus making oligomerization essential for function.
	gnl\|CDD\|144241	1	115	115	Gaps:2	62.09	182	56.64	18.58	2e-47	pfam00574 CLP_protease Clp protease. The Clp protease has an active site catalytic triad. In E. coli Clp protease ser-111 his-136 and asp-185 form the catalytic triad. A putative Clp protease from Cyanophora paradoxa has lost all of these active site residues and is therefore inactive. A member from Chlamydomonas eugametos contains two large insertions a member from Chlamydomonas reinhardtii contains one large insertion.
	gnl\|CDD\|31083	1	120	120	Gaps:2	59.00	200	55.93	22.03	7e-41	COG0740 ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification protein turnover chaperones / Intracellular trafficking and secretion].
	gnl\|CDD\|171575	1	115	115	Gaps:4	59.90	192	50.43	20.87	7e-41	PRK12553 PRK12553 ATP-dependent Clp protease proteolytic subunit Reviewed.
	gnl\|CDD\|129584	1	114	114	Gaps:2	58.64	191	58.04	15.18	6e-39	TIGR00493 clpP ATP-dependent Clp protease proteolytic subunit ClpP. This model for the proteolytic subunit ClpP has been rebuilt to a higher stringency. In every bacterial genome with the ClpXP machine a ClpP protein will be found that scores with this model. In general this ClpP member will be encoded adjacent to the clpX gene as were all examples used in the seed alignment. A large fraction of genomes have one or more additional ClpP paralogs sometimes encoded nearby and sometimes elsewhere. The stringency of the trusted cutoff used here excludes the more divergent ClpP paralogs from being called authentic ClpP by this model.
	gnl\|CDD\|164436	1	112	112	Gaps:3	55.50	200	43.24	18.02	6e-37	CHL00028 clpP ATP-dependent Clp protease proteolytic subunit.
	gnl\|CDD\|132924	1	111	111	Gaps:2	67.28	162	45.87	18.35	8e-32	cd07013 S14_ClpP Caseinolytic protease (ClpP) is an ATP-dependent highly conserved serine protease. Clp protease (caseinolytic protease ClpP Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota but seems to be absent in archaea mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. Additionally they are implicated in the control of cell growth targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components both of which are required for effective levels of protease activity in the presence of ATP although the proteolytic subunit alone does possess some catalytic activity. Active site consists of the triad Ser His and Asp some members have lost all of these active site residues and are therefore inactive while others may have one or two large insertions. ClpP seems to prefer hydrophobic or non-polar residues at P1 or P1' positions in its substrate. The protease exists as a tetradecamer made up of two heptameric rings stacked back-to-back such that the catalytic triad of each subunit is located at the interface between three monomers thus making oligomerization essential for function.
	gnl\|CDD\|139060	1	115	115	Gaps:2	57.65	196	50.44	15.04	4e-30	PRK12551 PRK12551 ATP-dependent Clp protease proteolytic subunit Reviewed.
	gnl\|CDD\|172984	1	116	116	Gaps:2	51.58	221	47.37	18.42	4e-30	PRK14514 PRK14514 ATP-dependent Clp protease proteolytic subunit Provisional.
rpsblast_kog	gnl\|CDD\|36058	1	122	122	Gaps:2	43.64	275	54.17	18.33	5e-42	KOG0840 KOG0840 KOG0840 ATP-dependent Clp protease proteolytic subunit [Posttranslational modification protein turnover chaperones].

Other analysis

Functional Gbrowse

Ortholog