GRS - Genome Report System

Botrytis cinerea B0510 GRS

Functional annotation

BC1G_03020.1

Gene Identifier

Domain/Motif (Interproscan results)

Localization / Targeting

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	bfu:BC1G_03020	1	260	260	n/a	100.00	260	100.00	0.00	1e-150	hypothetical protein
	ssl:SS1G_07536	25	260	236	Gaps:6	75.86	319	61.57	12.40	3e-82	hypothetical protein
	nfi:NFIA_069390	54	244	191	Gaps:25	60.44	321	51.55	11.34	2e-44	RNase H domain protein
	ang:An12g03040	54	260	207	Gaps:28	58.20	366	47.42	15.02	1e-42	hypothetical protein
	pcs:Pc16g06030	55	258	204	Gaps:27	83.94	249	46.41	13.40	1e-38	Pc16g06030
	ang:An04g02730	38	236	199	Gaps:32	69.90	299	39.71	14.35	5e-27	hypothetical protein
	tml:GSTUM_00002449001	34	244	211	Gaps:29	25.32	782	36.87	18.69	2e-21	hypothetical protein
	lbc:LACBIDRAFT_327438	79	245	167	Gaps:21	72.46	207	47.33	10.00	4e-17	hypothetical protein
	lbc:LACBIDRAFT_297866	81	244	164	Gaps:21	79.46	185	44.90	10.88	4e-15	hypothetical protein
	pan:PODANSg565	39	253	215	Gaps:43	71.13	284	33.17	16.83	1e-12	hypothetical protein
blastp_uniprot_sprot	sp\|B8HPS9\|RNH_CYAP4	85	201	117	Gaps:15	66.24	157	45.19	16.35	2e-12	Ribonuclease H OS Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN rnhA PE 3 SV 1
	sp\|O70338\|RNH1_MOUSE	83	196	114	Gaps:15	36.14	285	41.75	17.48	3e-12	Ribonuclease H1 OS Mus musculus GN Rnaseh1 PE 2 SV 1
	sp\|C6DC65\|RNH_PECCP	81	207	127	Gaps:24	72.08	154	44.14	17.12	6e-12	Ribonuclease H OS Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN rnhA PE 3 SV 1
	sp\|Q5BK46\|RNH1_RAT	83	196	114	Gaps:15	36.14	285	41.75	17.48	6e-12	Ribonuclease H1 OS Rattus norvegicus GN Rnaseh1 PE 2 SV 1
	sp\|A1S6T0\|RNH_SHEAM	81	201	121	Gaps:24	67.31	156	47.62	15.24	7e-12	Ribonuclease H OS Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN rnhA PE 3 SV 1
	sp\|Q8DM24\|RNH_THEEB	85	201	117	Gaps:16	66.04	159	46.67	16.19	8e-12	Ribonuclease H OS Thermosynechococcus elongatus (strain BP-1) GN rnhA PE 3 SV 1
	sp\|Q6D1V7\|RNH_ERWCT	81	207	127	Gaps:24	72.08	154	44.14	16.22	1e-11	Ribonuclease H OS Erwinia carotovora subsp. atroseptica GN rnhA PE 3 SV 1
	sp\|O60930\|RNH1_HUMAN	83	196	114	Gaps:15	36.01	286	40.78	17.48	1e-11	Ribonuclease H1 OS Homo sapiens GN RNASEH1 PE 1 SV 2
	sp\|A4W6V4\|RNH_ENT38	81	201	121	Gaps:18	67.74	155	44.76	15.24	1e-11	Ribonuclease H OS Enterobacter sp. (strain 638) GN rnhA PE 3 SV 1
	sp\|Q5QZL3\|RNH_IDILO	78	201	124	Gaps:24	68.79	157	42.59	15.74	1e-11	Ribonuclease H OS Idiomarina loihiensis GN rnhA PE 3 SV 1
blastp_pdb	1rbt_A	81	201	121	Gaps:18	67.74	155	42.86	18.10	7e-12	mol:protein length:155 RIBONUCLEASE H
	2zqb_D	78	201	124	Gaps:26	68.35	158	45.37	13.89	1e-11	mol:protein length:158 Ribonuclease HI
	2zqb_C	78	201	124	Gaps:26	68.35	158	45.37	13.89	1e-11	mol:protein length:158 Ribonuclease HI
	2zqb_B	78	201	124	Gaps:26	68.35	158	45.37	13.89	1e-11	mol:protein length:158 Ribonuclease HI
	2zqb_A	78	201	124	Gaps:26	68.35	158	45.37	13.89	1e-11	mol:protein length:158 Ribonuclease HI
	2yv0_X	81	201	121	Gaps:18	67.74	155	41.90	19.05	3e-11	mol:protein length:155 Ribonuclease HI
	1rbv_A	81	201	121	Gaps:18	67.74	155	41.90	18.10	3e-11	mol:protein length:155 RIBONUCLEASE H
	1rbu_A	81	201	121	Gaps:18	67.74	155	41.90	18.10	3e-11	mol:protein length:155 RIBONUCLEASE H
	1kvb_A	81	201	121	Gaps:18	67.74	155	41.90	18.10	4e-11	mol:protein length:155 RIBONUCLEASE H
	1kvc_A	81	201	121	Gaps:18	67.74	155	41.90	18.10	4e-11	mol:protein length:155 RIBONUCLEASE H
rpsblast_cdd	gnl\|CDD\|119393	85	244	160	Gaps:39	99.23	130	38.76	11.63	2e-20	cd06222 RnaseH RNase H (RNase HI) is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a not sequence-specific manner. One of the important functions of RNase H is to remove Okazaki fragments during DNA replication. RNase H knockout mice lack mitochondrial DNA replication and die as embryos. The retroviral reverse transcriptase contains an RNase H domain that plays an important role in converting a single stranded retroviral genomic RNA into a dsDNA for integration into host chromosomes. RNase H inhibitors have been explored as an anti-HIV drug target because RNase H inactivation inhibits reverse transcription..
	gnl\|CDD\|166850	82	201	120	Gaps:36	70.75	147	48.08	11.54	9e-18	PRK00203 rnhA ribonuclease H Reviewed.
	gnl\|CDD\|30676	80	245	166	Gaps:28	93.51	154	36.11	14.58	5e-17	COG0328 RnhA Ribonuclease HI [DNA replication recombination and repair].
	gnl\|CDD\|143857	80	245	166	Gaps:48	100.00	126	38.89	14.29	6e-11	pfam00075 RnaseH RNase H. RNase H digests the RNA strand of an RNA/DNA hybrid. Important enzyme in retroviral replication cycle and often found as a domain associated with reverse transcriptases. Structure is a mixed alpha+beta fold with three a/b/a layers.
	gnl\|CDD\|169558	85	201	117	Gaps:14	71.43	147	38.10	20.00	2e-09	PRK08719 PRK08719 ribonuclease H Reviewed.
rpsblast_kog	gnl\|CDD\|38956	32	251	220	Gaps:28	57.68	371	27.10	17.29	7e-15	KOG3752 KOG3752 KOG3752 Ribonuclease H [Replication recombination and repair].

Other analysis

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