GRS - Genome Report System

Botrytis cinerea T4 GRS

Functional annotation

BofuT4P10000103001

Sequence

Domain/Motif (Interproscan results)

Localization / Targeting

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	bfu:BC1G_00576	1	388	388	Gaps:35	100.00	353	87.25	0.00	1e-169	hypothetical protein K01181 endo-1 4-beta-xylanase [EC:3.2.1.8]
	ssl:SS1G_00509	1	388	388	Gaps:23	100.00	365	71.23	9.32	1e-149	hypothetical protein K01181 endo-1 4-beta-xylanase [EC:3.2.1.8]
	nfi:NFIA_106540	92	388	297	Gaps:11	91.08	314	69.93	10.84	1e-115	glycosyl hydrolase family 10 protein K01181 endo-1 4-beta-xylanase [EC:3.2.1.8]
	ang:An03g00940	92	388	297	Gaps:2	90.83	327	64.98	11.11	1e-110	xynA endo-1 4-beta-xylanase A precursor (EC:3.2.1.8) K01181 endo-1 4-beta-xylanase [EC:3.2.1.8]
	pcs:Pc20g07020	92	388	297	Gaps:4	89.73	331	65.66	10.44	1e-110	XylP endo-1 4-beta-xylanase A precursor XylP-Penicillium chrysogenum K01181 endo-1 4-beta-xylanase [EC:3.2.1.8]
	mgr:MGG_02245	27	388	362	Gaps:11	94.47	380	54.87	11.98	1e-108	MG02245.4 xylanase family 10
	aor:AO090001000208	92	388	297	Gaps:46	92.15	344	63.09	8.83	1e-108	beta-1 4-xylanase
	act:ACLA_048770	92	388	297	Gaps:9	90.85	317	64.24	13.89	1e-107	glycosyl hydrolase family 10 protein K01181 endo-1 4-beta-xylanase [EC:3.2.1.8]
	afv:AFLA_008110	92	388	297	Gaps:2	91.05	324	62.03	12.54	1e-104	extracellular endo-1 4-beta-xylanase putative K01181 endo-1 4-beta-xylanase [EC:3.2.1.8]
	aor:AO090103000423	92	388	297	Gaps:17	90.61	309	64.64	13.57	1e-104	beta-1 4-xylanase K01181 endo-1 4-beta-xylanase [EC:3.2.1.8]
blastp_uniprot_sprot	sp\|Q96VB6\|XYNF3_ASPOR	92	388	297	Gaps:1	91.64	323	67.57	9.46	1e-117	Endo-1 4-beta-xylanase F3 OS Aspergillus oryzae GN xynF3 PE 1 SV 1
	sp\|Q0H904\|XYNC_ASPFU	92	388	297	Gaps:1	91.08	325	66.55	11.15	1e-117	Endo-1 4-beta-xylanase C OS Aspergillus fumigatus GN xlnC PE 2 SV 2
	sp\|A1CX14\|XYNC_NEOFI	92	388	297	Gaps:11	91.08	314	69.93	10.84	1e-116	Probable endo-1 4-beta-xylanase C OS Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN xlnC PE 2 SV 1
	sp\|B0Y6E0\|XYNC_ASPFC	92	388	297	Gaps:10	90.82	316	68.64	11.50	1e-115	Probable endo-1 4-beta-xylanase C OS Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN xlnC PE 2 SV 2
	sp\|P23360\|XYNA_THEAU	98	388	291	Gaps:1	88.15	329	66.21	11.38	1e-113	Endo-1 4-beta-xylanase OS Thermoascus aurantiacus GN XYNA PE 1 SV 4
	sp\|Q4JHP5\|XYNC_ASPTE	92	388	297	Gaps:1	90.80	326	64.86	10.81	1e-112	Probable endo-1 4-beta-xylanase C OS Aspergillus terreus GN xlnC PE 2 SV 1
	sp\|Q0CBM8\|XYNC_ASPTN	92	388	297	Gaps:1	90.80	326	65.20	10.47	1e-112	Probable endo-1 4-beta-xylanase C OS Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN xlnC PE 2 SV 2
	sp\|P56588\|XYNA_PENSI	92	388	297	Gaps:2	98.34	302	65.99	10.77	1e-112	Endo-1 4-beta-xylanase OS Penicillium simplicissimum PE 1 SV 1
	sp\|A2QFV7\|XYNC_ASPNC	92	388	297	Gaps:2	90.83	327	64.98	11.11	1e-111	Probable endo-1 4-beta-xylanase C OS Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN xlnC PE 2 SV 1
	sp\|C5J411\|XYNC_ASPNG	92	388	297	Gaps:2	90.83	327	64.65	11.45	1e-110	Probable endo-1 4-beta-xylanase C OS Aspergillus niger GN xlnC PE 2 SV 2
blastp_pdb	1i1x_A	98	388	291	Gaps:1	95.71	303	67.24	11.03	1e-115	mol:protein length:303 ENDO-1 4-BETA-XYLANASE
	1i1w_A	98	388	291	Gaps:1	95.71	303	67.24	11.03	1e-115	mol:protein length:303 ENDO-1 4-BETA-XYLANASE
	2bnj_A	98	388	291	Gaps:1	95.71	303	66.90	11.03	1e-115	mol:protein length:303 ENDO-1 4-BETA-XYLANASE
	1k6a_A	98	388	291	Gaps:1	95.71	303	66.21	11.38	1e-114	mol:protein length:303 xylanase I
	1gor_A	98	388	291	Gaps:1	95.71	303	66.21	11.38	1e-114	mol:protein length:303 ENDO-1 4-BETA-XYLANASE
	1goq_A	98	388	291	Gaps:1	95.71	303	66.21	11.38	1e-114	mol:protein length:303 ENDO-1 4-BETA-XYLANASE
	1goo_A	98	388	291	Gaps:1	95.71	303	66.21	11.38	1e-114	mol:protein length:303 ENDO-1 4-BETA-XYLANASE
	1gom_A	98	388	291	Gaps:1	95.71	303	66.21	11.38	1e-114	mol:protein length:303 ENDO-1 4-BETA-XYLANASE
	1gok_A	98	388	291	Gaps:1	95.71	303	66.21	11.38	1e-114	mol:protein length:303 ENDO-1 4-BETA-XYLANASE
	1bg4_A	92	388	297	Gaps:2	98.34	302	65.99	10.77	1e-113	mol:protein length:302 ENDO-1 4-BETA-XYLANASE
rpsblast_cdd	gnl\|CDD\|144064	91	388	298	Gaps:20	100.00	308	50.97	15.91	1e-123	pfam00331 Glyco_hydro_10 Glycosyl hydrolase family 10.
	gnl\|CDD\|128881	135	384	250	Gaps:12	100.00	254	50.00	16.54	1e-101	smart00633 Glyco_10 Glycosyl hydrolase family 10.
	gnl\|CDD\|33489	85	384	300	Gaps:27	93.04	345	34.89	13.40	5e-56	COG3693 XynA Beta-1 4-xylanase [Carbohydrate transport and metabolism].
	gnl\|CDD\|128532	27	58	32	n/a	94.12	34	62.50	12.50	3e-11	smart00236 fCBD Fungal-type cellulose-binding domain. Small four-cysteine cellulose-binding domain of fungi.
	gnl\|CDD\|144364	27	54	28	n/a	96.55	29	64.29	7.14	1e-10	pfam00734 CBM_1 Fungal cellulose binding domain.
rpsblast_kog	no results

Other analysis

Genome Mapping at gene locus

Analysis	Hit name	RefStart	RefEnd	Hit length	Hit identity	Hit coverage	eValue	Hit description
RepeatMasker_ALL_Repbase	no results
TRF	no results
REPET	no results
sim4_Bot_allest	YCMA_567039	1434033	1434762	574	99.65	100.00	n/a	Botrytis cinerea HortResearch libraries
	B2BC_045_109_F06	1433859	1434412	401	96.51	100.00	n/a	B0510 Spores suspension on bean library
	PD0ADA4YG14CM1	1433915	1434807	686	99.71	100.00	n/a	B0510 mycelium - carbon sources library
	PD0ADA7YO10CM1	1433595	1434491	675	99.70	100.00	n/a	B0510 mycelium - carbon sources library
	PD0ADA1YO08CM1	1433535	1434341	644	99.53	100.00	n/a	B0510 mycelium - carbon sources library
	BcA1_3476_B22	1433639	1434639	729	99.86	100.00	n/a	BC A1 mycelium
	B2BC_045_109_B03	1433503	1434459	735	99.46	100.00	n/a	B0510 Spores suspension on bean library
	B2BC_045_109_G08	1433493	1434457	743	99.46	100.00	n/a	B0510 Spores suspension on bean library
	PD0ADA1YP12CM1	1433506	1434161	540	99.26	100.00	n/a	B0510 mycelium - carbon sources library
	YCNA_551755	1434294	1435136	585	98.80	100.00	n/a	Botrytis cinerea HortResearch libraries
sim4_Bot_allest4_clctg	CL_bt4_SuperContig_10_1_bt4ctg_0272_001.Contig1_v5	1433493	1434807	1043	99.42	100.00	n/a	all_lib_clone_nr:8
sim4_Ss_allest	no results
blastx_uniprot_sprot	P56588	1433529	1434691	302	70.07	97.35	n/a	Endo-1 4-beta-xylanase - Penicillium simplicissimum
	O59859	1433529	1434691	327	68.71	89.91	n/a	Endo-1 4-beta-xylanase precursor - Aspergillus aculeatus
	P33559	1433529	1434691	327	68.14	90.21	n/a	Endo-1 4-beta-xylanase A precursor - Aspergillus kawachi (Aspergillus awamori var. kawachi)
	P29417	1433547	1434712	353	67.57	83.85	n/a	Endo-1 4-beta-xylanase precursor - Penicillium chrysogenum (Penicillium notatum)
	P46239	1433529	1434976	385	58.52	91.43	n/a	Putative endoglucanase type F precursor - Fusarium oxysporum
	Q00177	1433529	1434724	327	61.56	93.88	n/a	Endo-1 4-beta-xylanase C precursor - Emericella nidulans (Aspergillus nidulans)
	P23360	1433529	1434488	329	70.49	74.16	n/a	Endo-1 4-beta-xylanase precursor - Thermoascus aurantiacus
	P07986	1433532	1434655	484	44.36	56.82	n/a	Exoglucanase/xylanase precursor [Includes: Exoglucanase - Cellulomonas fimi
	O60206	1433777	1434691	333	50.42	70.87	n/a	Endo-1 4-beta-xylanase precursor - Agaricus bisporus (Common mushroom)
	P26514	1433529	1434247	477	44.66	43.19	n/a	Endo-1 4-beta-xylanase A precursor - Streptomyces lividans
blastx_uniprot_trembl	A3FG82	1433529	1434697	325	70.61	91.08	n/a	Endoxylanase - Aspergillus fumigatus (Sartorya fumigata)
	Q0H904	1433529	1434697	325	70.27	91.08	n/a	XynC - Aspergillus fumigatus (Sartorya fumigata)
	Q5S7A8	1433529	1434727	327	67.75	93.88	n/a	Endo-1 4-beta-xylanase - Penicillium canescens
	Q9P8J1	1433529	1434727	329	67.96	93.92	n/a	Endo-1 4-beta-D-xylanase A - Penicillium purpurogenum
	A1CX14	1433529	1434697	314	73.43	91.08	n/a	Glycosyl hydrolase family 10 protein - Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181) (Aspergillus fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
	A2QFV7	1433529	1434691	327	69.15	90.21	n/a	Endo-1 4-beta-xylanase A precursor xynA-Aspergillus niger [putative sequencing error] - Aspergillus niger
	Q4JHP5	1433529	1434703	326	67.68	91.10	n/a	Xylanase family 10 - Aspergillus terreus
	Q6PRW6	1433547	1434712	353	67.57	83.85	n/a	Endo-1 4-beta-D-xylan xylanohydrolase preucrsor - Penicillium chrysogenum (Penicillium notatum)
blastx_FNG30_prot	SS1G_00509.1	1433529	1434805	365	80.60	91.78	n/a	sclerotinia_sclerotiorum hypothetical protein translation 366 aa
	MGG_02245.5	1433529	1434976	380	61.38	91.32	n/a	magnaporthe_grisea xylanase family 10 translation 381 aa
	MGG_01542.5	1433529	1434691	331	64.07	89.12	n/a	magnaporthe_grisea xylanase III putative translation 332 aa
	NCU05924.2	1433529	1434703	329	61.95	90.27	n/a	Neurospora crassa hypothetical protein translation 330 aa
	AO090701000887	1433529	1434760	327	60.94	97.86	n/a	Aspergillus oryzae beta-14-xylanase
	jgi:Phchr1:139732:e_gww2.2.635	1433529	1434982	357	62.32	96.64	n/a	Phanerochaete chrysosporium
	jgi:Triree:20579	1433529	1434667	347	63.16	82.13	n/a	Trichoderma reesei
	gi:70994060:ref:XP_751877.1:	1433529	1434697	324	65.42	91.05	n/a	Aspergillus fumigatus Af293 extracellular endo-14-beta-xylanase
	AO090103000423	1433529	1434712	309	65.96	92.23	n/a	Aspergillus oryzae beta-14-xylanase
	FG11304.1	1433529	1434976	381	58.05	91.34	n/a	fusarium_graminearum hypothetical protein 382 aa
sim4_B0510_genes	BC1G_00576.1	1433526	1435114	1062	99.62	100.00	n/a	n/a
sim4_SS_genes	SS1G_00509.1	1433559	1434603	1098	87.59	39.62	n/a	n/a
blastn_b0510_supercontig	B0510_supercontig_1.2	1433233	1434366	1005568	99.21	n/a	n/a	n/a
blastn_b0510_supercontig	B0510_supercontig_1.2	1434385	1435719	1005568	98.65	n/a	n/a	n/a
blastn_SS_supercontig	SS_supercontig_1.1	1434024	1434176	2777073	87.58	n/a	n/a	n/a
	SS_supercontig_1.1	1433748	1433953	2777073	83.01	n/a	n/a	n/a
	SS_supercontig_1.1	1434537	1434670	2777073	83.58	n/a	n/a	n/a
blat_oligo	botrytisP00052888	1434967	1435074	60	n/a	n/a	n/a	array_gene:BofuT4_P021460_1 . max_over_threshold:37.03 . min_over_threshold:0.64 . percent_hyb_over_threshold:64.28 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00052889	1434749	1434807	60	n/a	n/a	n/a	array_gene:BofuT4_P021460_1 . max_over_threshold:81.35 . min_over_threshold:0.87 . percent_hyb_over_threshold:92.85 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00052891	1434320	1434438	60	n/a	n/a	n/a	array_gene:BofuT4_P021460_1 . max_over_threshold:219.41 . min_over_threshold:3.63 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00052892	1434309	1434427	60	n/a	n/a	n/a	array_gene:BofuT4_P021460_1 . max_over_threshold:200.53 . min_over_threshold:4.42 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00052893	1434296	1434414	60	n/a	n/a	n/a	array_gene:BofuT4_P021460_1 . max_over_threshold:199.51 . min_over_threshold:2.95 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00052894	1434155	1434261	60	n/a	n/a	n/a	array_gene:BofuT4_P021460_1 . max_over_threshold:111.08 . min_over_threshold:1.36 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00052895	1433943	1434053	60	n/a	n/a	n/a	array_gene:BofuT4_P021460_1 . max_over_threshold:156.95 . min_over_threshold:2.02 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00052896	1433658	1433782	60	n/a	n/a	n/a	array_gene:BofuT4_P021460_1 . max_over_threshold:128.36 . min_over_threshold:1.61 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00052897	1433595	1433654	60	n/a	n/a	n/a	array_gene:BofuT4_P021460_1 . max_over_threshold:81.37 . min_over_threshold:1.2 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0

Analysis

Type

Start

End

Ortholog

Current manual annotation

Functional edition

Gene ID:

Gene Name:

Synonym:

PMID:

Functional validation status

Not validate Validate

Evidence Code :

Gene function:

Comments:

Gene Ontology:

Search ontology by term or ID (for this enter only number) :

Gene prediction at gene locus

TreeView