Release notes
Available versions
| Version | Description |
|---|---|
| GnpAsso 1.0.2 | |
| GnpAsso 1.0.1 | Allow search of GWAS association results using group(s) of markers, Create Panel card, Filter GWAS association results using tresholds for association values, Allow sort of results in GWT pager, Add delete button for each selected item in GWT generic forms, Add display of graphics for association result data, Export association results in CSV, Chart display for association results is broken for some values |
| GnpAsso 1.0.0 | Create GnpAsso module, update database schema, create form for querying GWAS data, create GWAS result page, create common reusable GWT components, setup functional tests environment. |
Version 1.0.2 (2012/09/05)
Sub-task
- [GNP-1596] - Functional validation for release of GnpAsso 1.0.1
Bug
- [GNP-1593] - Chart display does not restrict correctly when using a marker set as restriction parameter
- [GNP-1613] - Part of result page is displayed in form when exception is thrown during callback and/or when no result is found
Improvement
- [GNP-1627] - Add informations in linkage disequilibrium pager (panel card).
New Feature
- [GNP-1523] - Link GnpAsso result page and Marker card
- [GNP-1524] - Add kinship & structure to Panel card
Task
- [GNP-1595] - Release GnpAsso 1.0.1
- [GNP-1617] - Add project and contact informations in GnpAsso gwas_experiment table.
Version 1.0.1 (2012/07/13)
Bug
- [GNP-1412] - Taxon and contact global searches provoke errors
- [GNP-1430] - Change language lost restriction parameters when stocked as array in form bean
- [GNP-1435] - The toggle function for the menu items does not work.
- [GNP-1506] - Fix GnpAsso failing tests
- [GNP-1555] - Chart display for association results is broken for some values
Improvement
- [GNP-1320] - Add not null contraints on site_t.
- [GNP-1333] - Transform "association_value_type" field from string to ontology term in "association_value" table.
- [GNP-1376] - Link Genotype table to Allele_Group instead of Allele_Effect.
- [GNP-1385] - Display navigation tabs on taxon result page even if there are no results.
- [GNP-1413] - Change the style of html links.
- [GNP-1482] - Makes Accession to Lot association navigable.
- [GNP-1492] - Add delete button for each selected item in GWT generic forms
- [GNP-1559] - Convert exiting source to UTF-8
New Feature
- [GNP-1069] - Ontology loading: loading tool.
- [GNP-1280] - Create publication form/results pages.
- [GNP-1336] - Create Panel card
- [GNP-1371] - Allow search of GWAS association results using group(s) of markers
- [GNP-1372] - Filter GWAS association results using tresholds for association values
- [GNP-1373] - Allow sort of results in GWT pager
- [GNP-1375] - Add display of graphics for association result data
- [GNP-1381] - Export association results in CSV
- [GNP-1488] - Add species group selection tool.
Task
- [GNP-1287] - Fix failing tests.
- [GNP-1377] - Modify phenotyping_year type from date to varchar in GA_Phenotype table.
- [GNP-1379] - Divide Linkage_Disequilibrium table in 2 tables.
- [GNP-1388] - Move Trait table from GnpMap to Aster.
- [GNP-1410] - Release GnpAsso 1.0.0
Version 1.0.0 (2012/04/03)
Bug
- [GNP-1330] - "Back to URGI home page" from GnpMap and GnpArray display problem
Improvement
- [GNP-1355] - Make the taxon search case insensitive.
New Feature
- [GNP-1137] - Create new tables in aster to store GnpAsso data.
- [GNP-1270] - Create form for querying association result using trait and marker information
- [GNP-1271] - Create result page for association data.
- [GNP-1293] - Variant Simple search: generic taxon form panel
- [GNP-1335] - Create generic card
- [GNP-1370] - Create common gwt widgets