| Analysis | rpsblast_cdd | Start | 54 |
| End | 321 | Strand | + |
| Length | 268 | Note | Gaps:46 |
| Hit Coverage | 88.96 | Hit Length | 299 |
| Hit Pident | 29.32 | E Val | 2e-14 |
| Hit Description | cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease catalyzes the degradation of ribulose-1 5-bisphosphate carboxylase/oxygenase. Chloroplast Nucleoids DNA-binding Protease catalyzes the degradation of ribulose-1 5-bisphosphate carboxylase/oxygenase (Rubisco) in senescent leaves of tobacco. Antisense tobacco with reduced amount of CND41 maintained green leaves and constant protein levels especially Rubisco. CND41 has DNA-binding as well as aspartic protease activities. The pepsin-like aspartic protease domain is located at the C-terminus of the protein. The enzyme is characterized by having two aspartic protease catalytic site motifs the Asp-Thr-Gly-Ser in the N-terminal and Asp-Ser-Gly-Ser in the C-terminal region. Aspartic proteases are bilobal enzymes each lobe contributing a catalytic Asp residue with an extended active site cleft localized between the two lobes of the molecule. One lobe may be evolved from the other through ancient gene-duplication event. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A clan AA). | Hit Pcons | 12.41 |
| Name | Qrob_P0183470.2 |
| Protein Identifier |
Organism . Name |
Score | Score Type | Protein Description | Alias (in v1) | Code Enzyme | Gene Prediction Quality |
|---|---|---|---|---|---|---|---|
| Qrob_P0183470.2 | Quercus robur | 100.0 | egn | (M=3) PTHR13683//PTHR13683:SF257 - ASPARTYL PROTEASES // SUBFAMILY NOT NAMED | EC:3.4.23.12 | validated |
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