| Analysis | rpsblast_cdd | Start | 39 |
| End | 139 | Strand | + |
| Length | 101 | Note | Gaps:12 |
| Hit Coverage | 38.28 | Hit Length | 290 |
| Hit Pident | 34.23 | E Val | 1e-11 |
| Hit Description | TIGR02000 NifU_proper Fe-S cluster assembly protein NifU. Three different but partially homologous Fe-S cluster assembly systems have been described: Isc Suf and Nif. The latter is associated with donation of an Fe-S cluster to nitrogenase in a number of nitrogen-fixing species. NifU described here consists of an N-terminal domain (pfam01592) and a C-terminal domain (pfam01106). Homologs with an equivalent domain archictecture from Helicobacter and Campylobacter however are excluded from this model by a high trusted cutoff. The model therefore is specific for NifU involved in nitrogenase maturation. The related model TIGR01999 homologous to the N-terminus of this model describes IscU from the Isc system as in E. coli Saccharomyces cerevisiae and Homo sapiens. | Hit Pcons | 19.82 |
| Name | Qrob_P0082350.2 |
| Protein Identifier |
Organism . Name |
Score | Score Type | Protein Description | Alias (in v1) | Code Enzyme | Gene Prediction Quality |
|---|---|---|---|---|---|---|---|
| Qrob_P0082350.2 | Quercus robur | 58.1 | egn | (M=1) PTHR11178:SF15 - NIFU-LIKE PROTEIN 1, CHLOROPLASTIC (PTHR11178:SF15) | validated |
Powered by
