| Analysis | rpsblast_cdd | Start | 23 |
| End | 141 | Strand | + |
| Length | 119 | Note | Gaps:32 |
| Hit Coverage | 65.35 | Hit Length | 228 |
| Hit Pident | 36.91 | E Val | 1e-25 |
| Hit Description | pfam04855 SNF5 SNF5 / SMARCB1 / INI1. SNF5 is a component of the yeast SWI/SNF complex which is an ATP-dependent nucleosome-remodelling complex that regulates the transcription of a subset of yeast genes. SNF5 is a key component of all SWI/SNF-class complexes characterized so far. This family consists of the conserved region of SNF5 including a direct repeat motif. SNF5 is essential for the assembly promoter targeting and chromatin remodelling activity of the SWI-SNF complex. SNF5 is also known as SMARCB1 for SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily b member 1 and also INI1 for integrase interactor 1. Loss-of function mutations in SNF5 are thought to contribute to oncogenesis in malignant rhabdoid tumours (MRTs). | Hit Pcons | 12.75 |
| Name | Qrob_P0036100.2 |
| Protein Identifier |
Organism . Name |
Score | Score Type | Protein Description | Alias (in v1) | Code Enzyme | Gene Prediction Quality |
|---|---|---|---|---|---|---|---|
| Qrob_P0036100.2 | Quercus robur | 0.0 | egn | (M=2) K11648 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 | validated |
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