Protein : Qrob_P0758410.2 Q. robur
Protein Identifier  ? Qrob_P0758410.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) 6.4.1.4 - Methylcrotonoyl-CoA carboxylase. Code Enzyme  EC:6.4.1.4
Gene Prediction Quality  validated Protein length 

Sequence

Length: 572  
Kegg Orthology  K01969
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0016874 ligase activity Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103495245 1 571 + 571 Gaps:13 100.00 580 85.69 0.0 methylcrotonoyl-CoA carboxylase beta chain mitochondrial
blastp_kegg lcl|csv:101204438 1 571 + 571 Gaps:10 100.00 577 86.14 0.0 methylcrotonoyl-CoA carboxylase beta chain mitochondrial-like
blastp_kegg lcl|vvi:100253805 1 571 + 571 Gaps:9 100.00 570 88.25 0.0 methylcrotonoyl-CoA carboxylase beta chain mitochondrial-like
blastp_kegg lcl|pop:POPTR_0009s10380g 1 571 + 571 Gaps:8 100.00 573 86.21 0.0 POPTRDRAFT_557395 Methylcrotonyl-CoA carboxylase beta chain family protein
blastp_kegg lcl|csv:101229454 1 571 + 571 Gaps:14 100.00 581 85.71 0.0 methylcrotonoyl-CoA carboxylase beta chain mitochondrial-like
blastp_kegg lcl|cit:102619146 1 571 + 571 Gaps:5 100.00 566 85.69 0.0 methylcrotonoyl-CoA carboxylase beta chain mitochondrial-like
blastp_kegg lcl|fve:101291410 1 571 + 571 Gaps:7 100.00 568 85.56 0.0 methylcrotonoyl-CoA carboxylase beta chain mitochondrial-like
blastp_kegg lcl|mdm:103436482 1 571 + 571 Gaps:6 100.00 571 86.34 0.0 methylcrotonoyl-CoA carboxylase beta chain mitochondrial
blastp_kegg lcl|pmum:103335362 18 571 + 554 Gaps:3 95.99 574 89.47 0.0 methylcrotonoyl-CoA carboxylase beta chain mitochondrial
blastp_kegg lcl|pper:PRUPE_ppa003445mg 18 571 + 554 Gaps:3 95.99 574 89.47 0.0 hypothetical protein
blastp_pdb 3u9t_B 31 571 + 541 Gaps:6 96.40 555 61.31 0.0 mol:protein length:555 Methylcrotonyl-CoA carboxylase beta-subunit
blastp_pdb 3u9s_L 31 571 + 541 Gaps:6 96.40 555 61.31 0.0 mol:protein length:555 Methylcrotonyl-CoA carboxylase beta-subunit
blastp_pdb 3u9s_J 31 571 + 541 Gaps:6 96.40 555 61.31 0.0 mol:protein length:555 Methylcrotonyl-CoA carboxylase beta-subunit
blastp_pdb 3u9s_H 31 571 + 541 Gaps:6 96.40 555 61.31 0.0 mol:protein length:555 Methylcrotonyl-CoA carboxylase beta-subunit
blastp_pdb 3u9s_F 31 571 + 541 Gaps:6 96.40 555 61.31 0.0 mol:protein length:555 Methylcrotonyl-CoA carboxylase beta-subunit
blastp_pdb 3u9s_D 31 571 + 541 Gaps:6 96.40 555 61.31 0.0 mol:protein length:555 Methylcrotonyl-CoA carboxylase beta-subunit
blastp_pdb 3u9s_B 31 571 + 541 Gaps:6 96.40 555 61.31 0.0 mol:protein length:555 Methylcrotonyl-CoA carboxylase beta-subunit
blastp_pdb 3u9r_B 31 571 + 541 Gaps:6 96.40 555 61.31 0.0 mol:protein length:555 Methylcrotonyl-CoA carboxylase beta-subunit
blastp_pdb 1vrg_F 51 549 + 499 Gaps:31 92.98 527 34.29 5e-82 mol:protein length:527 propionyl-CoA carboxylase beta subunit
blastp_pdb 1vrg_E 51 549 + 499 Gaps:31 92.98 527 34.29 5e-82 mol:protein length:527 propionyl-CoA carboxylase beta subunit
blastp_uniprot_sprot sp|Q9LDD8|MCCB_ARATH 1 571 + 571 Gaps:22 100.00 587 76.49 0.0 Methylcrotonoyl-CoA carboxylase beta chain mitochondrial OS Arabidopsis thaliana GN MCCB PE 2 SV 1
blastp_uniprot_sprot sp|Q9V9A7|MCCB_DROME 33 571 + 539 Gaps:11 95.16 578 64.36 0.0 Probable methylcrotonoyl-CoA carboxylase beta chain mitochondrial OS Drosophila melanogaster GN l(2)04524 PE 2 SV 1
blastp_uniprot_sprot sp|Q5XIT9|MCCB_RAT 31 571 + 541 Gaps:10 94.67 563 64.17 0.0 Methylcrotonoyl-CoA carboxylase beta chain mitochondrial OS Rattus norvegicus GN Mccc2 PE 2 SV 1
blastp_uniprot_sprot sp|Q3ULD5|MCCB_MOUSE 31 571 + 541 Gaps:10 94.67 563 63.79 0.0 Methylcrotonoyl-CoA carboxylase beta chain mitochondrial OS Mus musculus GN Mccc2 PE 1 SV 1
blastp_uniprot_sprot sp|P34385|MCCB_CAEEL 14 571 + 558 Gaps:23 91.94 608 59.93 0.0 Probable methylcrotonoyl-CoA carboxylase beta chain mitochondrial OS Caenorhabditis elegans GN F02A9.4 PE 3 SV 1
blastp_uniprot_sprot sp|Q9HCC0|MCCB_HUMAN 26 571 + 546 Gaps:10 95.56 563 63.01 0.0 Methylcrotonoyl-CoA carboxylase beta chain mitochondrial OS Homo sapiens GN MCCC2 PE 1 SV 1
blastp_uniprot_sprot sp|Q8T2J9|MCCB_DICDI 31 571 + 541 Gaps:9 91.50 588 63.94 0.0 Methylcrotonoyl-CoA carboxylase beta chain mitochondrial OS Dictyostelium discoideum GN mccb PE 3 SV 2
blastp_uniprot_sprot sp|O31825|YNGE_BACSU 65 559 + 495 Gaps:22 94.52 511 38.92 1e-101 Uncharacterized carboxylase YngE OS Bacillus subtilis (strain 168) GN yngE PE 3 SV 2
blastp_uniprot_sprot sp|Q8GBW6|12S_PROFR 49 562 + 514 Gaps:42 83.14 611 34.06 4e-80 Methylmalonyl-CoA carboxyltransferase 12S subunit OS Propionibacterium freudenreichii subsp. shermanii PE 1 SV 3
blastp_uniprot_sprot sp|P54541|PCCB_BACSU 52 546 + 495 Gaps:29 94.67 507 33.96 6e-73 Putative propionyl-CoA carboxylase beta chain OS Bacillus subtilis (strain 168) GN yqjD PE 3 SV 2

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 273 565 293 PS50989 "KEGG:00061+6.4.1.2","KEGG:00253+6.4.1.2","KEGG:00254+6.4.1.2","KEGG:00620+6.4.1.2","KEGG:00640+6.4.1.2","KEGG:00720+6.4.1.2","MetaCyc:PWY-4381","MetaCyc:PWY-5743","MetaCyc:PWY-5744","MetaCyc:PWY-5789","MetaCyc:PWY-6679","MetaCyc:PWY-6722","MetaCyc:PWY-7388","UniPathway:UPA00655" Acetyl-coenzyme A carboxyltransferase domain C-terminal region profile. IPR011763
PANTHER 33 571 539 PTHR22855:SF13 none none none
Gene3D 315 565 251 G3DSA:3.90.226.10 none none IPR029045
Gene3D 59 296 238 G3DSA:3.90.226.10 none none IPR029045
ProSiteProfiles 58 272 215 PS50980 "KEGG:00061+6.4.1.2","KEGG:00253+6.4.1.2","KEGG:00254+6.4.1.2","KEGG:00620+6.4.1.2","KEGG:00640+6.4.1.2","KEGG:00720+6.4.1.2","MetaCyc:PWY-4381","MetaCyc:PWY-5743","MetaCyc:PWY-5744","MetaCyc:PWY-5789","MetaCyc:PWY-6679","MetaCyc:PWY-6722","MetaCyc:PWY-7388","UniPathway:UPA00655" Acetyl-coenzyme A carboxyltransferase domain N-terminal region profile. IPR011762
SUPERFAMILY 312 571 260 SSF52096 none none IPR029045
Pfam 78 563 486 PF01039 "KEGG:00061+6.4.1.2","KEGG:00253+6.4.1.2","KEGG:00254+6.4.1.2","KEGG:00620+6.4.1.2","KEGG:00640+6.4.1.2","KEGG:00720+6.4.1.2","MetaCyc:PWY-4381","MetaCyc:PWY-5743","MetaCyc:PWY-5744","MetaCyc:PWY-5789","MetaCyc:PWY-6679","MetaCyc:PWY-6722","MetaCyc:PWY-7388","UniPathway:UPA00655" Carboxyl transferase domain IPR000022
PANTHER 33 571 539 PTHR22855 none none none
SUPERFAMILY 52 293 242 SSF52096 none none IPR029045

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

0 Targeting