Protein : Qrob_P0752820.2 Q. robur
Protein Identifier  ? Qrob_P0752820.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) K07901 - Ras-related protein Rab-8A Gene Prediction Quality  validated
Protein length 

Sequence

Length: 217  
Kegg Orthology  K07901
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0 Synonyms

9 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0015031 protein transport The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0007264 small GTPase mediated signal transduction Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.
GO:0003924 GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO:0006913 nucleocytoplasmic transport The directed movement of molecules between the nucleus and the cytoplasm.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mtr:MTR_1g068740 1 215 + 215 Gaps:1 99.07 216 90.65 6e-142 Ras-like protein
blastp_kegg lcl|mtr:MTR_1g068730 1 215 + 215 Gaps:1 99.07 216 90.19 3e-141 Ras-like protein
blastp_kegg lcl|tcc:TCM_042824 1 215 + 215 Gaps:1 99.07 216 88.79 2e-138 Ras-related small GTP-binding family protein
blastp_kegg lcl|mus:103999930 1 215 + 215 Gaps:1 99.07 216 88.32 7e-138 ras-related protein RABE1c-like
blastp_kegg lcl|mus:103996834 1 215 + 215 Gaps:1 99.07 216 88.32 2e-137 ras-related protein RABE1c-like
blastp_kegg lcl|pvu:PHAVU_007G011500g 11 215 + 205 Gaps:1 94.44 216 90.69 2e-135 hypothetical protein
blastp_kegg lcl|brp:103829943 1 215 + 215 Gaps:2 99.54 216 86.98 8e-135 ras-related protein RABE1a-like
blastp_kegg lcl|vvi:100243217 11 215 + 205 Gaps:1 94.44 216 91.18 1e-134 ras-related protein RABE1c-like
blastp_kegg lcl|pvu:PHAVU_011G066700g 1 215 + 215 Gaps:2 99.53 214 87.79 3e-134 hypothetical protein
blastp_kegg lcl|tcc:TCM_041897 11 215 + 205 Gaps:1 94.01 217 90.69 5e-134 RAB GTPaseA isoform 2
blastp_pdb 2fu5_D 12 181 + 170 Gaps:1 92.35 183 71.60 5e-88 mol:protein length:183 Ras-related protein Rab-8A
blastp_pdb 2fu5_C 12 181 + 170 Gaps:1 92.35 183 71.60 5e-88 mol:protein length:183 Ras-related protein Rab-8A
blastp_pdb 3tnf_A 13 181 + 169 Gaps:1 96.55 174 71.43 8e-87 mol:protein length:174 Ras-related protein Rab-8A
blastp_pdb 3qbt_G 13 181 + 169 Gaps:1 96.55 174 71.43 8e-87 mol:protein length:174 Ras-related protein Rab-8A
blastp_pdb 3qbt_E 13 181 + 169 Gaps:1 96.55 174 71.43 8e-87 mol:protein length:174 Ras-related protein Rab-8A
blastp_pdb 3qbt_C 13 181 + 169 Gaps:1 96.55 174 71.43 8e-87 mol:protein length:174 Ras-related protein Rab-8A
blastp_pdb 3qbt_A 13 181 + 169 Gaps:1 96.55 174 71.43 8e-87 mol:protein length:174 Ras-related protein Rab-8A
blastp_pdb 3l0i_D 4 182 + 179 Gaps:1 89.45 199 62.92 4e-80 mol:protein length:199 Ras-related protein Rab-1A
blastp_pdb 3l0i_B 4 182 + 179 Gaps:1 89.45 199 62.92 4e-80 mol:protein length:199 Ras-related protein Rab-1A
blastp_pdb 2fol_A 7 182 + 176 Gaps:1 91.62 191 63.43 3e-79 mol:protein length:191 Ras-related protein Rab-1A
blastp_uniprot_sprot sp|P28186|RAE1C_ARATH 11 215 + 205 Gaps:1 94.44 216 88.24 2e-132 Ras-related protein RABE1c OS Arabidopsis thaliana GN RABE1C PE 1 SV 1
blastp_uniprot_sprot sp|Q39433|RB1BV_BETVU 11 215 + 205 Gaps:2 94.42 215 88.18 9e-131 Ras-related protein RAB1BV OS Beta vulgaris GN RAB1BV PE 2 SV 1
blastp_uniprot_sprot sp|O24466|RAE1A_ARATH 11 215 + 205 Gaps:1 94.44 216 86.76 9e-130 Ras-related protein RABE1a OS Arabidopsis thaliana GN RABE1A PE 1 SV 1
blastp_uniprot_sprot sp|Q9LZD4|RAE1D_ARATH 1 216 + 216 Gaps:2 99.07 216 84.11 1e-122 Ras-related protein RABE1d OS Arabidopsis thaliana GN RABE1D PE 1 SV 1
blastp_uniprot_sprot sp|Q9SF91|RAE1E_ARATH 1 216 + 216 none 99.08 218 81.48 2e-120 Ras-related protein RABE1e OS Arabidopsis thaliana GN RABE1E PE 1 SV 1
blastp_uniprot_sprot sp|P20790|RAB8A_DICDI 1 215 + 215 Gaps:7 100.00 208 71.63 2e-104 Ras-related protein Rab-8A OS Dictyostelium discoideum GN rab8A PE 3 SV 1
blastp_uniprot_sprot sp|P20791|RAB8B_DICDI 1 215 + 215 Gaps:12 100.00 203 71.43 6e-101 Ras-related protein Rab-8B OS Dictyostelium discoideum GN rab8B PE 2 SV 1
blastp_uniprot_sprot sp|P36861|YPTV2_VOLCA 1 215 + 215 Gaps:5 99.54 217 64.35 2e-95 GTP-binding protein yptV2 OS Volvox carteri GN YPTV2 PE 3 SV 1
blastp_uniprot_sprot sp|P17609|YPT2_SCHPO 12 180 + 169 Gaps:1 84.00 200 77.38 8e-92 GTP-binding protein ypt2 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN ypt2 PE 3 SV 1
blastp_uniprot_sprot sp|Q2HJI8|RAB8B_BOVIN 12 181 + 170 Gaps:1 81.64 207 72.78 2e-88 Ras-related protein Rab-8B OS Bos taurus GN RAB8B PE 2 SV 1

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 17 178 162 PF00071 none Ras family IPR001806
SMART 17 180 164 SM00173 none Ras subfamily of RAS small GTPases IPR020849
TIGRFAM 14 170 157 TIGR00231 none small_GTP: small GTP-binding protein domain IPR005225
SMART 21 216 196 SM00176 none Ran (Ras-related nuclear proteins) /TC4 subfamily of small GTPases IPR002041
PANTHER 8 215 208 PTHR24073 none none none
PRINTS 16 37 22 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 119 132 14 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 39 55 17 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 57 79 23 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 155 177 23 PR00449 none Transforming protein P21 ras signature IPR001806
SMART 1 181 181 SM00177 none ARF-like small GTPases IPR024156
Gene3D 7 215 209 G3DSA:3.40.50.300 none none IPR027417
SMART 16 180 165 SM00175 none Rab subfamily of small GTPases IPR003579
SMART 18 180 163 SM00174 "Reactome:REACT_11044" Rho (Ras homology) subfamily of Ras-like small GTPases IPR003578
SUPERFAMILY 11 181 171 SSF52540 none none IPR027417
PANTHER 8 215 208 PTHR24073:SF380 none none none
ProSiteProfiles 11 215 205 PS51419 none small GTPase Rab1 family profile. none

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9

0 Targeting