Protein : Qrob_P0752340.2 Q. robur
Protein Identifier  ? Qrob_P0752340.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K03245 - translation initiation factor eIF-3 subunit 1 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 157  
Kegg Orthology  K03245
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0003743 translation initiation factor activity Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.
GO:0005852 eukaryotic translation initiation factor 3 complex A complex of several polypeptides that plays at least two important roles in protein synthesis: First, eIF3 binds to the 40S ribosome and facilitates loading of the Met-tRNA/eIF2.GTP ternary complex to form the 43S preinitiation complex. Subsequently, eIF3 apparently assists eIF4 in recruiting mRNAs to the 43S complex. The eIF3 complex contains five conserved core subunits, and may contain several additional proteins; the non-core subunits are thought to mediate association of the complex with specific sets of mRNAs.

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa011146mg 3 156 + 154 none 69.37 222 79.22 3e-72 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1220860 5 156 + 152 Gaps:1 68.02 222 80.13 5e-72 Eukaryotic translation initiation factor 3 subunit putative
blastp_kegg lcl|pmum:103336828 3 156 + 154 none 69.37 222 78.57 3e-71 eukaryotic translation initiation factor 3 subunit J-like
blastp_kegg lcl|cic:CICLE_v10002394mg 13 156 + 144 none 64.29 224 81.94 5e-68 hypothetical protein
blastp_kegg lcl|cit:102610104 13 156 + 144 none 64.29 224 81.94 5e-68 eukaryotic translation initiation factor 3 subunit J-like
blastp_kegg lcl|atr:s00066p00018250 12 156 + 145 Gaps:2 65.00 220 79.72 3e-67 AMTR_s00066p00018250 hypothetical protein
blastp_kegg lcl|mdm:103401542 13 156 + 144 none 63.44 227 80.56 4e-67 eukaryotic translation initiation factor 3 subunit J-like
blastp_kegg lcl|mdm:103436857 13 156 + 144 none 63.44 227 79.86 2e-66 eukaryotic translation initiation factor 3 subunit J-like
blastp_kegg lcl|pxb:103962492 13 156 + 144 none 63.44 227 79.17 5e-66 eukaryotic translation initiation factor 3 subunit J-like
blastp_kegg lcl|tcc:TCM_021280 8 156 + 149 Gaps:1 67.27 220 74.32 3e-64 Eukaryotic translation initiation factor 3 subunit J
blastp_pdb 3bpj_D 47 121 + 75 none 93.75 80 34.67 2e-09 mol:protein length:80 Eukaryotic translation initiation factor 3 su
blastp_pdb 3bpj_C 47 121 + 75 none 93.75 80 34.67 2e-09 mol:protein length:80 Eukaryotic translation initiation factor 3 su
blastp_pdb 3bpj_B 47 121 + 75 none 93.75 80 34.67 2e-09 mol:protein length:80 Eukaryotic translation initiation factor 3 su
blastp_pdb 3bpj_A 47 121 + 75 none 93.75 80 34.67 2e-09 mol:protein length:80 Eukaryotic translation initiation factor 3 su
blastp_uniprot_sprot sp|Q54KI0|EIF3J_DICDI 14 124 + 111 Gaps:5 52.97 219 31.03 1e-14 Eukaryotic translation initiation factor 3 subunit J OS Dictyostelium discoideum GN eif3J PE 3 SV 1
blastp_uniprot_sprot sp|B4MP81|EIF3J_DROWI 24 156 + 133 Gaps:10 57.20 236 36.30 3e-09 Eukaryotic translation initiation factor 3 subunit J OS Drosophila willistoni GN Adam PE 3 SV 1
blastp_uniprot_sprot sp|Q7SXU0|EI3JA_DANRE 24 156 + 133 Gaps:5 55.42 249 35.51 3e-09 Eukaryotic translation initiation factor 3 subunit J-A OS Danio rerio GN eif3ja PE 1 SV 1
blastp_uniprot_sprot sp|B4J4E7|EIF3J_DROGR 24 147 + 124 none 52.32 237 31.45 8e-09 Eukaryotic translation initiation factor 3 subunit J OS Drosophila grimshawi GN Adam PE 3 SV 1
blastp_uniprot_sprot sp|Q5ZKA4|EIF3J_CHICK 24 109 + 86 Gaps:1 33.73 252 35.29 2e-08 Eukaryotic translation initiation factor 3 subunit J OS Gallus gallus GN EIF3J PE 2 SV 1
blastp_uniprot_sprot sp|B4LN42|EIF3J_DROVI 24 156 + 133 Gaps:2 57.20 236 33.33 2e-08 Eukaryotic translation initiation factor 3 subunit J OS Drosophila virilis GN Adam PE 3 SV 1
blastp_uniprot_sprot sp|A0JPM9|EIF3J_RAT 24 109 + 86 none 33.20 259 33.72 2e-08 Eukaryotic translation initiation factor 3 subunit J OS Rattus norvegicus GN Eif3j PE 2 SV 1
blastp_uniprot_sprot sp|Q3UGC7|EI3JA_MOUSE 24 109 + 86 none 32.95 261 33.72 3e-08 Eukaryotic translation initiation factor 3 subunit J-A OS Mus musculus GN Eif3j1 PE 2 SV 1
blastp_uniprot_sprot sp|Q66JS6|EI3JB_MOUSE 24 109 + 86 none 32.70 263 33.72 3e-08 Eukaryotic translation initiation factor 3 subunit J-B OS Mus musculus GN Eif3j2 PE 1 SV 1
blastp_uniprot_sprot sp|A7RSH7|EIF3J_NEMVE 20 111 + 92 Gaps:4 38.87 247 31.25 4e-08 Eukaryotic translation initiation factor 3 subunit J OS Nematostella vectensis GN v1g240395 PE 3 SV 1
rpsblast_cdd gnl|CDD|203994 24 156 + 133 Gaps:9 58.68 242 38.03 1e-29 pfam08597 eIF3_subunit Translation initiation factor eIF3 subunit. This is a family of proteins which are subunits of the eukaryotic translation initiation factor 3 (eIF3). In yeast it is called Hcr1. The Saccharomyces cerevisiae protein eIF3j (HCR1) has been shown to be required for processing of 20S pre-rRNA and binds to 18S rRNA and eIF3 subunits Rpg1p and Prt1p.
rpsblast_kog gnl|CDD|40010 24 156 + 133 Gaps:9 57.26 248 44.37 5e-21 KOG4813 KOG4813 KOG4813 Translation initiation factor eIF3 p35 subunit [Translation ribosomal structure and biogenesis].

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 44 122 79 G3DSA:1.10.246.60 none none IPR023194
Pfam 24 156 133 PF08597 none Translation initiation factor eIF3 subunit IPR013906
PANTHER 22 156 135 PTHR21681 none none IPR013906

0 Localization

0 Qtllist

0 Targeting