Protein : Qrob_P0748330.2 Q. robur
Protein Identifier  ? Qrob_P0748330.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) KOG0161//KOG0971 - Myosin class II heavy chain [Cytoskeleton]. // Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control cell division chromosome partitioning Cytoskeleton]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 868  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0004373 glycogen (starch) synthase activity Catalysis of the reaction: UDP-glucose + (1,4)-alpha-D-glucosyl(n) = UDP + (1,4)-alpha-D-glucosyl(n+1).

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100257130 1 864 + 864 Gaps:19 84.97 1011 75.09 0.0 uncharacterized LOC100257130
blastp_kegg lcl|tcc:TCM_029533 1 864 + 864 Gaps:41 85.51 1056 71.65 0.0 Starch synthase 4 isoform 1
blastp_kegg lcl|cic:CICLE_v10014107mg 1 864 + 864 Gaps:25 79.28 1081 74.80 0.0 hypothetical protein
blastp_kegg lcl|cit:102626137 1 864 + 864 Gaps:25 84.85 1010 75.03 0.0 probable starch synthase 4 chloroplastic/amyloplastic-like
blastp_kegg lcl|pxb:103951254 1 864 + 864 Gaps:33 84.97 1011 73.46 0.0 probable starch synthase 4 chloroplastic/amyloplastic
blastp_kegg lcl|mdm:103419707 1 864 + 864 Gaps:33 84.97 1011 73.69 0.0 probable starch synthase 4 chloroplastic/amyloplastic
blastp_kegg lcl|mdm:103434969 1 864 + 864 Gaps:33 84.97 1011 73.69 0.0 probable starch synthase 4 chloroplastic/amyloplastic
blastp_kegg lcl|pper:PRUPE_ppa000758mg 1 864 + 864 Gaps:25 84.71 1014 74.39 0.0 hypothetical protein
blastp_kegg lcl|pmum:103325009 1 864 + 864 Gaps:25 84.71 1014 74.16 0.0 probable starch synthase 4 chloroplastic/amyloplastic
blastp_kegg lcl|mdm:103427878 1 864 + 864 Gaps:31 84.94 1009 73.63 0.0 probable starch synthase 4 chloroplastic/amyloplastic
blastp_pdb 1rzv_B 521 858 + 338 Gaps:21 67.84 485 32.52 5e-39 mol:protein length:485 Glycogen synthase 1
blastp_pdb 1rzv_A 521 858 + 338 Gaps:21 67.84 485 32.52 5e-39 mol:protein length:485 Glycogen synthase 1
blastp_pdb 1rzu_B 521 858 + 338 Gaps:21 67.84 485 32.52 5e-39 mol:protein length:485 Glycogen synthase 1
blastp_pdb 1rzu_A 521 858 + 338 Gaps:21 67.84 485 32.52 5e-39 mol:protein length:485 Glycogen synthase 1
blastp_pdb 3d1j_A 521 863 + 343 Gaps:29 70.02 477 32.93 2e-37 mol:protein length:477 Glycogen synthase
blastp_pdb 3guh_A 521 863 + 343 Gaps:29 68.87 485 32.93 2e-37 mol:protein length:485 Glycogen synthase
blastp_pdb 2r4u_A 521 863 + 343 Gaps:29 68.87 485 32.93 2e-37 mol:protein length:485 Glycogen synthase
blastp_pdb 2r4t_A 521 863 + 343 Gaps:29 68.87 485 32.93 2e-37 mol:protein length:485 Glycogen synthase
blastp_pdb 2qzs_A 521 863 + 343 Gaps:29 68.87 485 32.93 2e-37 mol:protein length:485 glycogen synthase
blastp_pdb 3cx4_A 521 863 + 343 Gaps:29 68.87 485 32.93 3e-37 mol:protein length:485 Glycogen synthase
blastp_uniprot_sprot sp|Q0WVX5|SSY4_ARATH 1 864 + 864 Gaps:71 85.29 1040 66.29 0.0 Probable starch synthase 4 chloroplastic/amyloplastic OS Arabidopsis thaliana GN SS4 PE 2 SV 1
blastp_uniprot_sprot sp|Q6MAS9|GLGA_PARUW 519 864 + 346 Gaps:12 70.80 500 50.85 2e-112 Glycogen synthase OS Protochlamydia amoebophila (strain UWE25) GN glgA PE 3 SV 1
blastp_uniprot_sprot sp|Q604D9|GLGA2_METCA 522 857 + 336 Gaps:15 68.79 487 51.04 2e-104 Glycogen synthase 2 OS Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) GN glgA2 PE 3 SV 2
blastp_uniprot_sprot sp|Q2JNM6|GLGA1_SYNJB 519 856 + 338 Gaps:7 68.64 491 51.34 1e-99 Glycogen synthase 1 OS Synechococcus sp. (strain JA-2-3B'a(2-13)) GN glgA1 PE 3 SV 1
blastp_uniprot_sprot sp|Q2JSZ9|GLGA1_SYNJA 519 861 + 343 Gaps:7 69.65 491 50.58 5e-99 Glycogen synthase 1 OS Synechococcus sp. (strain JA-3-3Ab) GN glgA1 PE 3 SV 1
blastp_uniprot_sprot sp|Q3M9U1|GLGA1_ANAVT 519 856 + 338 Gaps:7 68.50 492 48.37 3e-97 Glycogen synthase 1 OS Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN glgA1 PE 3 SV 1
blastp_uniprot_sprot sp|P72623|GLGA2_SYNY3 519 863 + 345 Gaps:4 70.26 491 46.67 1e-96 Probable glycogen synthase 2 OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN glgA2 PE 3 SV 1
blastp_uniprot_sprot sp|Q8Z0Q9|GLGA2_NOSS1 519 856 + 338 Gaps:7 68.50 492 47.18 5e-96 Probable glycogen synthase 2 OS Nostoc sp. (strain PCC 7120 / UTEX 2576) GN glgA2 PE 3 SV 1
blastp_uniprot_sprot sp|Q3JEW3|GLGA1_NITOC 519 856 + 338 Gaps:4 68.58 487 47.90 6e-96 Glycogen synthase 1 OS Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN glgA1 PE 3 SV 1
blastp_uniprot_sprot sp|F4IAG2|SSY3_ARATH 517 864 + 348 Gaps:49 28.89 1042 53.16 1e-82 Starch synthase 3 chloroplastic/amyloplastic OS Arabidopsis thaliana GN SS3 PE 1 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
TIGRFAM 520 863 344 TIGR02095 "KEGG:00500+2.4.1.21","MetaCyc:PWY-622","UniPathway:UPA00164" glgA: glycogen/starch synthase, ADP-glucose type IPR011835
Coils 383 411 29 Coil none none none
Coils 352 380 29 Coil none none none
Coils 167 219 53 Coil none none none
SUPERFAMILY 516 856 341 SSF53756 none none none
Coils 259 280 22 Coil none none none
Coils 415 436 22 Coil none none none
PANTHER 278 691 414 PTHR12526 none none none
PANTHER 707 788 82 PTHR12526 none none none
PANTHER 813 867 55 PTHR12526 none none none
Gene3D 774 862 89 G3DSA:3.40.50.2000 none none none
Pfam 521 760 240 PF08323 "KEGG:00500+2.4.1.21","MetaCyc:PWY-622","UniPathway:UPA00164" Starch synthase catalytic domain IPR013534
PANTHER 707 788 82 PTHR12526:SF304 none none none
PANTHER 813 867 55 PTHR12526:SF304 none none none
Coils 290 325 36 Coil none none none
PANTHER 278 691 414 PTHR12526:SF304 none none none

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting