Protein : Qrob_P0747110.2 Q. robur
Protein Identifier  ? Qrob_P0747110.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) 4.2.3.5 - Chorismate synthase. Code Enzyme  EC:4.2.3.5
Gene Prediction Quality  validated Protein length 

Sequence

Length: 433  
Kegg Orthology  K01736
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0009073 aromatic amino acid family biosynthetic process The chemical reactions and pathways resulting in the formation of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).
GO:0004107 chorismate synthase activity Catalysis of the reaction: 5-O-(1-carboxyvinyl)-3-phosphoshikimate = chorismate + phosphate.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0010s22840g 1 431 + 431 Gaps:5 99.31 437 83.87 0.0 POPTRDRAFT_724971 chorismate synthase family protein
blastp_kegg lcl|cam:101490158 3 432 + 430 Gaps:4 99.31 435 83.10 0.0 chorismate synthase chloroplastic-like
blastp_kegg lcl|cic:CICLE_v10031547mg 3 430 + 428 Gaps:7 98.42 442 83.45 0.0 hypothetical protein
blastp_kegg lcl|cit:102627582 3 430 + 428 Gaps:7 98.42 442 83.45 0.0 chorismate synthase chloroplastic-like
blastp_kegg lcl|pop:POPTR_0008s04040g 1 431 + 431 Gaps:4 99.32 438 82.99 0.0 POPTRDRAFT_655918 chorismate synthase family protein
blastp_kegg lcl|gmx:100814518 3 429 + 427 Gaps:6 98.62 435 83.68 0.0 chorismate synthase 1 chloroplastic-like
blastp_kegg lcl|rcu:RCOM_0228160 3 432 + 430 Gaps:9 98.62 435 82.75 0.0 Chorismate synthase chloroplast precursor putative (EC:4.2.3.5)
blastp_kegg lcl|fve:101298831 1 427 + 427 Gaps:9 99.32 439 81.88 0.0 chorismate synthase chloroplastic-like
blastp_kegg lcl|tcc:TCM_043128 3 432 + 430 Gaps:21 99.78 448 79.42 0.0 Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyas putative isoform 1
blastp_kegg lcl|eus:EUTSA_v10011486mg 3 423 + 421 Gaps:5 96.15 441 81.60 0.0 hypothetical protein
blastp_pdb 1r53_A 50 408 + 359 Gaps:8 96.07 382 53.68 1e-131 mol:protein length:382 Chorismate synthase
blastp_pdb 1r52_D 50 408 + 359 Gaps:8 96.07 382 53.68 1e-131 mol:protein length:382 Chorismate synthase
blastp_pdb 1r52_C 50 408 + 359 Gaps:8 96.07 382 53.68 1e-131 mol:protein length:382 Chorismate synthase
blastp_pdb 1r52_B 50 408 + 359 Gaps:8 96.07 382 53.68 1e-131 mol:protein length:382 Chorismate synthase
blastp_pdb 1r52_A 50 408 + 359 Gaps:8 96.07 382 53.68 1e-131 mol:protein length:382 Chorismate synthase
blastp_pdb 1umf_D 50 403 + 354 Gaps:29 95.07 365 39.77 5e-74 mol:protein length:365 Chorismate synthase
blastp_pdb 1umf_C 50 403 + 354 Gaps:29 95.07 365 39.77 5e-74 mol:protein length:365 Chorismate synthase
blastp_pdb 1umf_B 50 403 + 354 Gaps:29 95.07 365 39.77 5e-74 mol:protein length:365 Chorismate synthase
blastp_pdb 1umf_A 50 403 + 354 Gaps:29 95.07 365 39.77 5e-74 mol:protein length:365 Chorismate synthase
blastp_pdb 1um0_D 50 403 + 354 Gaps:29 95.07 365 39.77 5e-74 mol:protein length:365 Chorismate synthase
blastp_uniprot_sprot sp|P57720|AROC_ARATH 1 424 + 424 Gaps:5 97.94 436 81.03 0.0 Chorismate synthase chloroplastic OS Arabidopsis thaliana GN EMB1144 PE 2 SV 2
blastp_uniprot_sprot sp|Q42884|AROC1_SOLLC 3 422 + 420 Gaps:8 97.27 440 80.37 0.0 Chorismate synthase 1 chloroplastic OS Solanum lycopersicum GN CS1 PE 2 SV 1
blastp_uniprot_sprot sp|Q42885|AROC2_SOLLC 1 422 + 422 Gaps:11 98.14 431 82.74 0.0 Chorismate synthase 2 chloroplastic OS Solanum lycopersicum GN CS2 PE 2 SV 1
blastp_uniprot_sprot sp|P27793|AROC_CAPSE 3 423 + 421 Gaps:12 96.87 447 77.83 0.0 Chorismate synthase chloroplastic OS Capnoides sempervirens PE 1 SV 1
blastp_uniprot_sprot sp|Q31RS5|AROC_SYNE7 49 412 + 364 Gaps:3 99.72 362 68.42 8e-178 Chorismate synthase OS Synechococcus elongatus (strain PCC 7942) GN aroC PE 3 SV 1
blastp_uniprot_sprot sp|B7JVZ9|AROC_CYAP8 49 412 + 364 Gaps:3 99.72 362 68.70 1e-177 Chorismate synthase OS Cyanothece sp. (strain PCC 8801) GN aroC PE 3 SV 1
blastp_uniprot_sprot sp|Q5N2I0|AROC_SYNP6 49 412 + 364 Gaps:3 99.72 362 68.14 1e-176 Chorismate synthase OS Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN aroC PE 3 SV 1
blastp_uniprot_sprot sp|Q8DLM1|AROC_THEEB 49 411 + 363 Gaps:3 99.17 363 68.06 2e-173 Chorismate synthase OS Thermosynechococcus elongatus (strain BP-1) GN aroC PE 3 SV 1
blastp_uniprot_sprot sp|B8HNK4|AROC_CYAP4 49 412 + 364 Gaps:4 99.45 362 68.61 3e-173 Chorismate synthase OS Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN aroC PE 3 SV 1
blastp_uniprot_sprot sp|B0C2W2|AROC_ACAM1 49 412 + 364 Gaps:3 99.18 364 67.59 7e-173 Chorismate synthase OS Acaryochloris marina (strain MBIC 11017) GN aroC PE 3 SV 1

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PIRSF 49 420 372 PIRSF001456 "KEGG:00400+4.2.3.5","MetaCyc:PWY-6163","UniPathway:UPA00053" none IPR000453
SUPERFAMILY 50 410 361 SSF103263 "KEGG:00400+4.2.3.5","MetaCyc:PWY-6163","UniPathway:UPA00053" none IPR000453
ProSitePatterns 62 77 16 PS00787 "KEGG:00400+4.2.3.5","MetaCyc:PWY-6163","UniPathway:UPA00053" Chorismate synthase signature 1. IPR020541
Pfam 56 403 348 PF01264 "KEGG:00400+4.2.3.5","MetaCyc:PWY-6163","UniPathway:UPA00053" Chorismate synthase IPR000453
ProSitePatterns 170 186 17 PS00788 "KEGG:00400+4.2.3.5","MetaCyc:PWY-6163","UniPathway:UPA00053" Chorismate synthase signature 2. IPR020541
TIGRFAM 56 407 352 TIGR00033 "KEGG:00400+4.2.3.5","MetaCyc:PWY-6163","UniPathway:UPA00053" aroC: chorismate synthase IPR000453
PANTHER 49 422 374 PTHR21085:SF2 none none none
Gene3D 55 420 366 G3DSA:3.60.150.10 "KEGG:00400+4.2.3.5","MetaCyc:PWY-6163","UniPathway:UPA00053" none IPR000453
ProSitePatterns 377 393 17 PS00789 "KEGG:00400+4.2.3.5","MetaCyc:PWY-6163","UniPathway:UPA00053" Chorismate synthase signature 3. IPR020541
PANTHER 49 422 374 PTHR21085 "KEGG:00400+4.2.3.5","MetaCyc:PWY-6163","UniPathway:UPA00053";signature_desc=CHORISMATE SYNTHASE none IPR000453

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting