Protein : Qrob_P0745090.2 Q. robur
Protein Identifier  ? Qrob_P0745090.2 Organism . Name  Quercus robur
Score  99.0 Score Type  egn
Protein Description  (M=1) PTHR21689 - LIN-9 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 270  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006351 transcription, DNA-templated The cellular synthesis of RNA on a template of DNA.
GO:0007049 cell cycle The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division.
GO:0017053 transcriptional repressor complex A protein complex that possesses activity that prevents or downregulates transcription.

14 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100261468 5 268 + 264 Gaps:11 24.00 1146 66.91 1e-112 protein ALWAYS EARLY 3-like
blastp_kegg lcl|tcc:TCM_021168 5 268 + 264 Gaps:11 23.25 1183 65.82 1e-109 Always early putative isoform 1
blastp_kegg lcl|rcu:RCOM_0680380 5 268 + 264 Gaps:15 24.22 1119 63.47 2e-104 always early putative
blastp_kegg lcl|pop:POPTR_0010s02390g 5 268 + 264 Gaps:11 39.12 703 62.55 1e-103 POPTRDRAFT_821767 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_003G102900g 5 268 + 264 Gaps:16 41.52 660 59.85 2e-94 hypothetical protein
blastp_kegg lcl|csv:101221669 5 268 + 264 Gaps:22 22.74 1161 60.61 4e-93 protein ALWAYS EARLY 3-like
blastp_kegg lcl|mtr:MTR_4g119390 5 268 + 264 Gaps:17 21.53 1277 60.36 2e-92 Lin-9-like protein
blastp_kegg lcl|cit:102627497 5 269 + 265 Gaps:13 24.15 1151 59.35 1e-91 protein ALWAYS EARLY 3-like
blastp_kegg lcl|cmo:103483833 5 268 + 264 Gaps:36 23.20 1138 60.23 1e-91 protein ALWAYS EARLY 3
blastp_kegg lcl|gmx:100781646 5 268 + 264 Gaps:24 23.20 1181 60.95 1e-90 protein ALWAYS EARLY 3-like
blastp_uniprot_sprot sp|Q6A332|ALY3_ARATH 5 268 + 264 Gaps:24 23.32 1132 56.44 6e-82 Protein ALWAYS EARLY 3 OS Arabidopsis thaliana GN ALY3 PE 1 SV 1
blastp_uniprot_sprot sp|Q6A333|ALY2_ARATH 96 268 + 173 Gaps:11 15.60 1051 50.00 3e-34 Protein ALWAYS EARLY 2 OS Arabidopsis thaliana GN ALY2 PE 1 SV 1
blastp_uniprot_sprot sp|Q6A331|ALY1_ARATH 87 269 + 183 Gaps:20 17.82 971 38.73 5e-26 Protein ALWAYS EARLY 1 OS Arabidopsis thaliana GN ALY1 PE 2 SV 2
rpsblast_kog gnl|CDD|36237 4 145 + 142 Gaps:19 16.85 837 24.82 1e-14 KOG1019 KOG1019 KOG1019 Retinoblastoma pathway protein LIN-9/chromatin-associated protein Aly [Chromatin structure and dynamics Cell cycle control cell division chromosome partitioning Signal transduction mechanisms].

2 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 5 67 63 PTHR21689 none none IPR010561
PANTHER 156 269 114 PTHR21689 none none IPR010561

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

0 Targeting