Protein : Qrob_P0738990.2 Q. robur
Protein Identifier  ? Qrob_P0738990.2 Organism . Name  Quercus robur
Score  95.1 Score Type  egn
Protein Description  (M=2) K17805 - mitochondrial import inner membrane translocase subunit TIM16 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 92  
Kegg Orthology  K17805
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005744 mitochondrial inner membrane presequence translocase complex The protein transport machinery of the mitochondrial inner membrane that contains three essential Tim proteins: Tim17 and Tim23 are thought to build a preprotein translocation channel while Tim44 interacts transiently with the matrix heat-shock protein Hsp70 to form an ATP-driven import motor.
GO:0030150 protein import into mitochondrial matrix The import of proteins across the outer and inner mitochondrial membranes into the matrix. Unfolded proteins enter the mitochondrial matrix with a chaperone protein; the information required to target the precursor protein from the cytosol to the mitochondrial matrix is contained within its N-terminal matrix-targeting sequence. Translocation of precursors to the matrix occurs at the rare sites where the outer and inner membranes are close together.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_020083 4 91 + 88 none 75.86 116 78.41 3e-45 Transporter Pam16
blastp_kegg lcl|cic:CICLE_v10022920mg 4 91 + 88 none 75.86 116 77.27 8e-45 hypothetical protein
blastp_kegg lcl|cit:102625816 4 91 + 88 none 75.86 116 77.27 8e-45 mitochondrial import inner membrane translocase subunit tim16-like
blastp_kegg lcl|pop:POPTR_0014s14920g 4 91 + 88 none 75.86 116 75.00 8e-45 POPTRDRAFT_664708 hypothetical protein
blastp_kegg lcl|fve:101291040 4 91 + 88 none 74.58 118 76.14 2e-44 mitochondrial import inner membrane translocase subunit tim16-like
blastp_kegg lcl|vvi:100261824 4 91 + 88 none 73.33 120 76.14 4e-44 mitochondrial import inner membrane translocase subunit tim16-like
blastp_kegg lcl|mdm:103449660 4 91 + 88 Gaps:2 76.27 118 76.67 2e-43 mitochondrial import inner membrane translocase subunit tim16
blastp_kegg lcl|pxb:103932062 4 91 + 88 Gaps:2 76.27 118 76.67 3e-43 mitochondrial import inner membrane translocase subunit Tim16
blastp_kegg lcl|crb:CARUB_v10018261mg 4 91 + 88 none 75.86 116 76.14 2e-42 hypothetical protein
blastp_kegg lcl|csv:101224269 4 91 + 88 none 75.86 116 75.00 3e-42 mitochondrial import inner membrane translocase subunit tim16-A-like
blastp_uniprot_sprot sp|Q9VF08|TIM16_DROME 28 79 + 52 Gaps:2 38.30 141 51.85 6e-09 Mitochondrial import inner membrane translocase subunit Tim16 OS Drosophila melanogaster GN blp PE 2 SV 1
blastp_uniprot_sprot sp|Q6PBL0|TIM16_DANRE 28 79 + 52 Gaps:3 41.09 129 60.38 1e-08 Mitochondrial import inner membrane translocase subunit tim16 OS Danio rerio GN pam16 PE 2 SV 1
blastp_uniprot_sprot sp|Q5XGJ0|TIM16_XENTR 31 79 + 49 Gaps:3 40.00 125 64.00 3e-08 Mitochondrial import inner membrane translocase subunit tim16 OS Xenopus tropicalis GN pam16 PE 2 SV 1
blastp_uniprot_sprot sp|Q5M995|TI16B_XENLA 31 79 + 49 Gaps:3 40.98 122 64.00 3e-08 Mitochondrial import inner membrane translocase subunit tim16-B OS Xenopus laevis GN pam16-b PE 2 SV 1
blastp_uniprot_sprot sp|Q6NTU3|TI16A_XENLA 31 79 + 49 Gaps:3 40.00 125 64.00 3e-08 Mitochondrial import inner membrane translocase subunit tim16-A OS Xenopus laevis GN pam16-a PE 2 SV 1
blastp_uniprot_sprot sp|Q9CQV1|TIM16_MOUSE 28 87 + 60 Gaps:3 48.80 125 52.46 5e-08 Mitochondrial import inner membrane translocase subunit TIM16 OS Mus musculus GN Pam16 PE 2 SV 1
blastp_uniprot_sprot sp|Q9Y3D7|TIM16_HUMAN 27 79 + 53 Gaps:3 43.20 125 55.56 1e-07 Mitochondrial import inner membrane translocase subunit TIM16 OS Homo sapiens GN PAM16 PE 1 SV 2
blastp_uniprot_sprot sp|Q4I375|TIM16_GIBZE 13 79 + 67 Gaps:8 54.35 138 46.67 6e-07 Mitochondrial import inner membrane translocase subunit TIM16 OS Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN PAM16 PE 3 SV 1
blastp_uniprot_sprot sp|Q7S6S4|TIM16_NEUCR 25 85 + 61 Gaps:7 48.23 141 47.06 1e-06 Mitochondrial import inner membrane translocase subunit tim16 OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN un-4 PE 3 SV 1
blastp_uniprot_sprot sp|Q9C1W5|TIM16_SCHPO 4 80 + 77 Gaps:8 63.28 128 44.44 1e-06 Mitochondrial import inner membrane translocase subunit tim16 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN pam16 PE 3 SV 1
rpsblast_cdd gnl|CDD|112471 26 79 + 54 Gaps:2 44.09 127 50.00 9e-07 pfam03656 Pam16 Pam16. The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM). In Saccharomyces cerevisiae Pam16 is required for preprotein translocation into the matrix but not for protein insertion into the inner membrane. Pam16 has a degenerate J domain. J-domain proteins play important regulatory roles as co-chaperones recruiting Hsp70 partners and accelerating the ATP-hydrolysis step of the chaperone cycle. Pam16's J-like domain strongly interacts with Pam18's J domain leading to a productive interaction of Pam18 with mtHsp70 at the mitochondria import channel. Pam18 stimulates the ATPase activity of mtHsp70.
rpsblast_kog gnl|CDD|38652 4 87 + 84 Gaps:6 68.18 132 41.11 2e-16 KOG3442 KOG3442 KOG3442 Uncharacterized conserved protein [Function unknown].

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 4 87 84 PTHR12388 none none IPR005341
Pfam 18 83 66 PF03656 none Pam16 none
Coils 14 35 22 Coil none none none

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting