Protein : Qrob_P0738350.2 Q. robur
Protein Identifier  ? Qrob_P0738350.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=5) PF05695 - Plant protein of unknown function (DUF825) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 216  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0009507 chloroplast A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:ThcaC_p080 18 206 + 189 Gaps:1 8.18 2298 90.43 8e-106 ycf2 hypothetical chloroplast RF21
blastp_kegg lcl|tcc:ThcaC_p063 18 206 + 189 Gaps:1 8.18 2298 90.43 8e-106 ycf2 hypothetical chloroplast RF21
blastp_kegg lcl|pmum:18668109 18 206 + 189 Gaps:1 8.26 2277 89.36 4e-104 ycf2 CP95_p003 hypothetical chloroplast RF21
blastp_kegg lcl|pmum:18668076 18 206 + 189 Gaps:1 8.26 2277 89.36 4e-104 ycf2 CP95_p023 hypothetical chloroplast RF21
blastp_kegg lcl|pper:PrpeC_p083 18 206 + 189 Gaps:1 8.26 2277 89.36 4e-104 ycf2 hypothetical chloroplast RF2
blastp_kegg lcl|pper:PrpeC_p065 18 206 + 189 Gaps:1 8.26 2277 89.36 4e-104 ycf2 hypothetical chloroplast RF2
blastp_kegg lcl|pop:Poptr_cp098 18 206 + 189 Gaps:1 8.23 2285 89.36 5e-103 ycf2 Ycf2
blastp_kegg lcl|pop:Poptr_cp066 18 206 + 189 Gaps:1 8.23 2285 89.36 5e-103 ycf2 Ycf2
blastp_kegg lcl|csv:3429359 18 206 + 189 Gaps:4 9.61 1988 88.48 1e-102 ycf2 CsCp127 Ycf2
blastp_kegg lcl|csv:3429358 18 206 + 189 Gaps:4 9.60 1990 88.48 1e-102 ycf2 CsCp086 Ycf2
blastp_uniprot_sprot sp|Q09WV7|YCF2_MORIN 18 206 + 189 Gaps:2 8.25 2292 91.01 2e-107 Protein Ycf2 OS Morus indica GN ycf2-A PE 3 SV 1
blastp_uniprot_sprot sp|B1A978|YCF2_CARPA 18 206 + 189 Gaps:1 8.18 2298 90.43 9e-107 Protein Ycf2 OS Carica papaya GN ycf2-A PE 3 SV 1
blastp_uniprot_sprot sp|A4GYV4|YCF2_POPTR 18 206 + 189 Gaps:1 8.23 2285 89.36 2e-104 Protein Ycf2 OS Populus trichocarpa GN ycf2-1 PE 3 SV 1
blastp_uniprot_sprot sp|Q14F97|YCF2_POPAL 18 206 + 189 Gaps:1 8.24 2282 89.36 2e-104 Protein Ycf2 OS Populus alba GN ycf2-A PE 3 SV 1
blastp_uniprot_sprot sp|Q49KT6|YCF2_EUCGG 18 206 + 189 Gaps:1 8.25 2280 87.77 3e-104 Protein Ycf2 OS Eucalyptus globulus subsp. globulus GN ycf2-A PE 3 SV 1
blastp_uniprot_sprot sp|Q2QD30|YCF2_CUCSA 18 206 + 189 Gaps:4 9.61 1988 88.48 4e-104 Protein Ycf2 OS Cucumis sativus GN ycf2-A PE 3 SV 1
blastp_uniprot_sprot sp|A4QJP2|YCF2_AETGR 18 206 + 189 Gaps:1 8.21 2289 88.30 5e-104 Protein Ycf2 OS Aethionema grandiflorum GN ycf2-A PE 3 SV 1
blastp_uniprot_sprot sp|A4QJF8|YCF2_AETCO 18 206 + 189 Gaps:1 8.18 2298 88.30 1e-103 Protein Ycf2 OS Aethionema cordifolium GN ycf2-A PE 3 SV 1
blastp_uniprot_sprot sp|Q0ZIV6|YCF2_VITVI 18 206 + 189 Gaps:1 8.17 2300 88.30 2e-103 Protein Ycf2 OS Vitis vinifera GN ycf2-A PE 3 SV 1
blastp_uniprot_sprot sp|Q2L949|YCF2_GOSHI 18 206 + 189 Gaps:3 8.09 2298 89.78 2e-103 Protein Ycf2 OS Gossypium hirsutum GN ycf2-A PE 3 SV 1
rpsblast_cdd gnl|CDD|177097 18 206 + 189 Gaps:1 8.24 2281 91.49 3e-90 CHL00206 ycf2 Ycf2 Provisional.
rpsblast_cdd gnl|CDD|147703 3 206 + 204 Gaps:4 17.61 1170 76.21 3e-87 pfam05695 DUF825 Plant protein of unknown function (DUF825). This family consists of several plant proteins greater than 1000 residues in length. The function of this family is unknown.

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 29 215 187 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 17 206 190 PF05695 none Plant protein of unknown function (DUF825) IPR008543
Phobius 1 11 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 12 28 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

1 Localization

Analysis Start End Length
TMHMM 7 29 22

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting