Protein : Qrob_P0736790.2 Q. robur
Protein Identifier  ? Qrob_P0736790.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K17301 - coatomer, subunit beta Gene Prediction Quality  validated
Protein length 

Sequence

Length: 952  
Kegg Orthology  K17301
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0016192 vesicle-mediated transport A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
GO:0005198 structural molecule activity The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell.
GO:0030117 membrane coat Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules.
GO:0030126 COPI vesicle coat One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state.

39 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pvu:PHAVU_008G255400g 1 949 + 949 Gaps:1 99.79 950 92.09 0.0 hypothetical protein
blastp_kegg lcl|gmx:100802469 1 951 + 951 Gaps:1 100.00 950 91.16 0.0 coatomer subunit beta-1-like
blastp_kegg lcl|gmx:100814417 1 951 + 951 Gaps:1 100.00 950 90.84 0.0 coatomer subunit beta-1-like
blastp_kegg lcl|cmo:103501982 1 951 + 951 Gaps:1 100.00 950 90.95 0.0 coatomer subunit beta-1-like
blastp_kegg lcl|csv:101220146 1 951 + 951 Gaps:1 100.00 950 90.95 0.0 coatomer subunit beta-1-like
blastp_kegg lcl|cam:101503982 1 949 + 949 Gaps:1 99.79 950 90.72 0.0 coatomer subunit beta-1-like
blastp_kegg lcl|tcc:TCM_036827 1 951 + 951 Gaps:3 100.00 948 88.08 0.0 Coatomer beta subunit isoform 1
blastp_kegg lcl|vvi:100242255 1 951 + 951 Gaps:3 100.00 948 87.76 0.0 coatomer subunit beta-1-like
blastp_kegg lcl|cit:102624517 1 951 + 951 Gaps:11 100.00 958 85.91 0.0 coatomer subunit beta-1-like
blastp_kegg lcl|pxb:103926824 1 950 + 950 Gaps:1 99.89 950 87.99 0.0 coatomer subunit beta-1-like
blastp_pdb 2xa7_B 21 460 + 440 Gaps:49 74.16 592 22.32 8e-14 mol:protein length:592 AP-2 COMPLEX SUBUNIT BETA
blastp_pdb 2vgl_B 21 460 + 440 Gaps:49 74.28 591 22.32 9e-14 mol:protein length:591 AP-2 COMPLEX SUBUNIT BETA-1
blastp_pdb 2jkt_E 21 460 + 440 Gaps:49 74.28 591 22.32 9e-14 mol:protein length:591 AP-2 COMPLEX SUBUNIT BETA-1
blastp_pdb 2jkt_B 21 460 + 440 Gaps:49 74.28 591 22.32 9e-14 mol:protein length:591 AP-2 COMPLEX SUBUNIT BETA-1
blastp_pdb 2jkr_E 21 460 + 440 Gaps:49 74.28 591 22.32 9e-14 mol:protein length:591 AP-2 COMPLEX SUBUNIT BETA-1
blastp_pdb 2jkr_B 21 460 + 440 Gaps:49 74.28 591 22.32 9e-14 mol:protein length:591 AP-2 COMPLEX SUBUNIT BETA-1
blastp_pdb 1w63_L 48 460 + 413 Gaps:55 70.55 584 21.60 1e-07 mol:protein length:584 ADAPTER-RELATED PROTEIN COMPLEX 1 BETA 1 SUBU
blastp_pdb 1w63_J 48 460 + 413 Gaps:55 70.55 584 21.60 1e-07 mol:protein length:584 ADAPTER-RELATED PROTEIN COMPLEX 1 BETA 1 SUBU
blastp_pdb 1w63_H 48 460 + 413 Gaps:55 70.55 584 21.60 1e-07 mol:protein length:584 ADAPTER-RELATED PROTEIN COMPLEX 1 BETA 1 SUBU
blastp_pdb 1w63_F 48 460 + 413 Gaps:55 70.55 584 21.60 1e-07 mol:protein length:584 ADAPTER-RELATED PROTEIN COMPLEX 1 BETA 1 SUBU
blastp_uniprot_sprot sp|Q9SV21|COPB1_ARATH 1 951 + 951 Gaps:3 100.00 948 82.70 0.0 Coatomer subunit beta-1 OS Arabidopsis thaliana GN At4g31480 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SV20|COPB2_ARATH 1 951 + 951 Gaps:3 100.00 948 82.17 0.0 Coatomer subunit beta-2 OS Arabidopsis thaliana GN At4g31490 PE 2 SV 2
blastp_uniprot_sprot sp|Q53PC7|COPB1_ORYSJ 1 951 + 951 Gaps:3 99.90 953 80.46 0.0 Coatomer subunit beta-1 OS Oryza sativa subsp. japonica GN Os11g0174000 PE 2 SV 1
blastp_uniprot_sprot sp|Q0JNK5|COPB2_ORYSJ 1 951 + 951 Gaps:3 100.00 950 79.26 0.0 Coatomer subunit beta-2 OS Oryza sativa subsp. japonica GN Os01g0281400 PE 3 SV 1
blastp_uniprot_sprot sp|P23514|COPB_RAT 2 951 + 950 Gaps:28 99.48 953 51.58 0.0 Coatomer subunit beta OS Rattus norvegicus GN Copb1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9JIF7|COPB_MOUSE 22 951 + 930 Gaps:27 97.27 953 52.32 0.0 Coatomer subunit beta OS Mus musculus GN Copb1 PE 1 SV 1
blastp_uniprot_sprot sp|Q5ZIA5|COPB_CHICK 2 951 + 950 Gaps:28 99.48 953 51.69 0.0 Coatomer subunit beta OS Gallus gallus GN COPB1 PE 2 SV 1
blastp_uniprot_sprot sp|P53618|COPB_HUMAN 22 951 + 930 Gaps:27 97.27 953 52.32 0.0 Coatomer subunit beta OS Homo sapiens GN COPB1 PE 1 SV 3
blastp_uniprot_sprot sp|A0JN39|COPB_BOVIN 2 951 + 950 Gaps:28 99.48 953 51.48 0.0 Coatomer subunit beta OS Bos taurus GN COPB1 PE 1 SV 1
blastp_uniprot_sprot sp|Q5R922|COPB_PONAB 22 951 + 930 Gaps:27 97.27 953 52.21 0.0 Coatomer subunit beta OS Pongo abelii GN COPB1 PE 2 SV 1

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 816 944 129 PF14806 none Coatomer beta subunit appendage platform IPR029446
PANTHER 1 951 951 PTHR10635 none none IPR016460
Phobius 20 951 932 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 12 19 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Pfam 670 811 142 PF07718 "Reactome:REACT_11123" Coatomer beta C-terminal region IPR011710
Pfam 21 480 460 PF01602 none Adaptin N terminal region IPR002553
PIRSF 1 951 951 PIRSF005727 none none IPR016460
Phobius 1 19 19 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 1 3 3 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
SUPERFAMILY 553 640 88 SSF48371 none none IPR016024
SUPERFAMILY 15 478 464 SSF48371 none none IPR016024
Gene3D 20 480 461 G3DSA:1.25.10.10 none none IPR011989
Gene3D 555 643 89 G3DSA:1.25.10.10 none none IPR011989
Phobius 4 11 8 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none

0 Localization

0 Qtllist

0 Targeting