Protein : Qrob_P0731690.2 Q. robur
Protein Identifier  ? Qrob_P0731690.2 Organism . Name  Quercus robur
Score  87.0 Score Type  egn
Protein Description  (M=1) KOG0356//KOG0358//KOG0359//KOG0360//KOG0361//KOG0362//KOG0363 - Mitochondrial chaperonin Cpn60/Hsp60p [Posttranslational modification protein turnover chaperones]. // Chaperonin complex component TCP-1 delta subunit (CCT4) [Posttranslational modification protein turnover chaperones]. // Chaperonin complex component TCP-1 zeta subunit (CCT6) [Posttranslational modification protein turnover chaperones]. // Chaperonin complex component TCP-1 alpha subunit (CCT1) [Posttranslational modification protein turnover chaperones]. // Chaperonin complex component TCP-1 eta subunit (CCT7) [Posttranslational modification protein turnover chaperones]. // Chaperonin complex component TCP-1 theta subunit (CCT8) [Posttranslational modification protein turnover chaperones]. // Chaperonin complex component TCP-1 beta subunit (CCT2) [Posttranslational modification protein turnover chaperones]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 697  
Kegg Orthology  K04077
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0042026 protein refolding The process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones.
GO:0006457 protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.

47 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0342910 1 604 + 604 Gaps:3 99.34 605 93.84 0.0 rubisco subunit binding-protein beta subunit rubb putative
blastp_kegg lcl|csv:101217516 1 604 + 604 none 99.34 608 92.05 0.0 ruBisCO large subunit-binding protein subunit beta chloroplastic-like
blastp_kegg lcl|pper:PRUPE_ppa003093mg 1 604 + 604 Gaps:5 99.34 605 93.34 0.0 hypothetical protein
blastp_kegg lcl|cmo:103492416 1 604 + 604 none 99.34 608 91.72 0.0 ruBisCO large subunit-binding protein subunit beta chloroplastic
blastp_kegg lcl|pmum:103321762 1 604 + 604 Gaps:5 99.34 605 93.01 0.0 ruBisCO large subunit-binding protein subunit beta chloroplastic
blastp_kegg lcl|tcc:TCM_039855 1 604 + 604 Gaps:1 99.34 607 93.20 0.0 TCP-1/cpn60 chaperonin family protein
blastp_kegg lcl|vvi:100263832 1 604 + 604 none 99.34 608 93.87 0.0 ruBisCO large subunit-binding protein subunit beta chloroplastic-like
blastp_kegg lcl|pop:POPTR_0003s20870g 1 604 + 604 Gaps:1 99.34 607 92.54 0.0 POPTRDRAFT_712747 chaperonin precursor family protein
blastp_kegg lcl|pop:POPTR_0001s03980g 1 604 + 604 Gaps:1 99.34 607 92.21 0.0 POPTRDRAFT_797006 hypothetical protein
blastp_kegg lcl|fve:101313393 1 604 + 604 Gaps:7 99.33 601 92.13 0.0 ruBisCO large subunit-binding protein subunit beta chloroplastic-like
blastp_pdb 1wf4_n 63 597 + 535 Gaps:7 98.34 543 55.43 0.0 mol:protein length:543 Cpn60(GroEL)
blastp_pdb 1wf4_m 63 597 + 535 Gaps:7 98.34 543 55.43 0.0 mol:protein length:543 Cpn60(GroEL)
blastp_pdb 1wf4_l 63 597 + 535 Gaps:7 98.34 543 55.43 0.0 mol:protein length:543 Cpn60(GroEL)
blastp_pdb 1wf4_k 63 597 + 535 Gaps:7 98.34 543 55.43 0.0 mol:protein length:543 Cpn60(GroEL)
blastp_pdb 1wf4_j 63 597 + 535 Gaps:7 98.34 543 55.43 0.0 mol:protein length:543 Cpn60(GroEL)
blastp_pdb 1wf4_i 63 597 + 535 Gaps:7 98.34 543 55.43 0.0 mol:protein length:543 Cpn60(GroEL)
blastp_pdb 1wf4_h 63 597 + 535 Gaps:7 98.34 543 55.43 0.0 mol:protein length:543 Cpn60(GroEL)
blastp_pdb 1wf4_g 63 597 + 535 Gaps:7 98.34 543 55.43 0.0 mol:protein length:543 Cpn60(GroEL)
blastp_pdb 1wf4_f 63 597 + 535 Gaps:7 98.34 543 55.43 0.0 mol:protein length:543 Cpn60(GroEL)
blastp_pdb 1wf4_e 63 597 + 535 Gaps:7 98.34 543 55.43 0.0 mol:protein length:543 Cpn60(GroEL)
blastp_uniprot_sprot sp|P08927|RUBB_PEA 1 604 + 604 Gaps:24 99.16 595 91.19 0.0 RuBisCO large subunit-binding protein subunit beta chloroplastic OS Pisum sativum PE 1 SV 2
blastp_uniprot_sprot sp|Q9LJE4|CPNB2_ARATH 1 604 + 604 Gaps:12 99.33 596 90.37 0.0 Chaperonin 60 subunit beta 2 chloroplastic OS Arabidopsis thaliana GN CPN60B2 PE 1 SV 1
blastp_uniprot_sprot sp|P21241|RUBB_BRANA 1 596 + 596 Gaps:10 100.00 588 88.78 0.0 RuBisCO large subunit-binding protein subunit beta chloroplastic OS Brassica napus PE 2 SV 1
blastp_uniprot_sprot sp|P21240|CPNB1_ARATH 1 604 + 604 Gaps:12 99.33 600 88.26 0.0 Chaperonin 60 subunit beta 1 chloroplastic OS Arabidopsis thaliana GN CPN60B1 PE 1 SV 3
blastp_uniprot_sprot sp|C0Z361|CPNB3_ARATH 1 604 + 604 Gaps:13 99.33 597 88.03 0.0 Chaperonin 60 subunit beta 3 chloroplastic OS Arabidopsis thaliana GN CPN60B3 PE 1 SV 1
blastp_uniprot_sprot sp|Q43831|RUBB_SECCE 110 604 + 495 none 99.20 499 89.09 0.0 RuBisCO large subunit-binding protein subunit beta chloroplastic (Fragment) OS Secale cereale GN CPN60 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C667|CPNB4_ARATH 59 617 + 559 Gaps:3 91.00 611 66.01 0.0 Chaperonin 60 subunit beta 4 chloroplastic OS Arabidopsis thaliana GN CPN60B4 PE 1 SV 1
blastp_uniprot_sprot sp|Q119S1|CH601_TRIEI 63 594 + 532 Gaps:5 93.94 561 60.34 0.0 60 kDa chaperonin 1 OS Trichodesmium erythraeum (strain IMS101) GN groL1 PE 3 SV 1
blastp_uniprot_sprot sp|Q3M6L5|CH602_ANAVT 63 602 + 540 Gaps:7 95.18 560 60.60 0.0 60 kDa chaperonin 2 OS Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN groL2 PE 3 SV 2
blastp_uniprot_sprot sp|Q8YVS8|CH602_NOSS1 63 602 + 540 Gaps:7 95.18 560 60.04 0.0 60 kDa chaperonin 2 OS Nostoc sp. (strain PCC 7120 / UTEX 2576) GN groL2 PE 3 SV 1

23 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 203 269 67 SSF54849 none none none
Gene3D 433 582 150 G3DSA:1.10.560.10 none none IPR027413
PRINTS 460 481 22 PR00298 none 60kDa chaperonin signature IPR001844
PRINTS 412 437 26 PR00298 none 60kDa chaperonin signature IPR001844
PRINTS 146 173 28 PR00298 none 60kDa chaperonin signature IPR001844
PRINTS 330 353 24 PR00298 none 60kDa chaperonin signature IPR001844
PRINTS 90 116 27 PR00298 none 60kDa chaperonin signature IPR001844
Phobius 1 3 3 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Gene3D 259 432 174 G3DSA:3.50.7.10 none none IPR027409
Gene3D 60 258 199 G3DSA:1.10.560.10 none none IPR027413
SUPERFAMILY 247 438 192 SSF52029 none none IPR027409
ProSitePatterns 467 478 12 PS00296 none Chaperonins cpn60 signature. IPR018370
Coils 401 429 29 Coil none none none
SUPERFAMILY 468 586 119 SSF48592 none none none
SUPERFAMILY 72 197 126 SSF48592 none none none
Phobius 12 15 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PANTHER 39 632 594 PTHR11353 none none IPR002423
Pfam 86 589 504 PF00118 none TCP-1/cpn60 chaperonin family IPR002423
PANTHER 39 632 594 PTHR11353:SF8 none none none
Phobius 1 15 15 SIGNAL_PEPTIDE none Signal peptide region none
TIGRFAM 64 591 528 TIGR02348 none GroEL: chaperonin GroL IPR001844
Phobius 4 11 8 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 16 696 681 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting