Protein : Qrob_P0728910.2 Q. robur
Protein Identifier  ? Qrob_P0728910.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) K03113 - translation initiation factor eIF-1 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 114  
Kegg Orthology  K03113
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0003743 translation initiation factor activity Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.
GO:0006413 translational initiation The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA.

32 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pvu:PHAVU_011G139000g 1 113 + 113 none 100.00 113 92.04 4e-72 hypothetical protein
blastp_kegg lcl|gmx:100784390 1 113 + 113 none 100.00 113 92.92 7e-72 protein translation factor SUI1 homolog
blastp_kegg lcl|pda:103716824 1 113 + 113 none 100.00 113 92.04 1e-71 protein translation factor SUI1 homolog
blastp_kegg lcl|pvu:PHAVU_011G138900g 1 113 + 113 none 100.00 113 91.15 2e-71 hypothetical protein
blastp_kegg lcl|mdm:103404797 1 113 + 113 none 100.00 113 91.15 2e-71 protein translation factor SUI1 homolog
blastp_kegg lcl|gmx:100306129 1 113 + 113 none 100.00 113 91.15 3e-71 uncharacterized LOC100306129
blastp_kegg lcl|pvu:PHAVU_011G105700g 1 113 + 113 none 100.00 113 92.04 3e-71 hypothetical protein
blastp_kegg lcl|vvi:100243115 1 113 + 113 none 100.00 113 92.04 3e-71 protein translation factor SUI1 homolog 1-like
blastp_kegg lcl|pop:POPTR_0007s02520g 1 113 + 113 none 100.00 113 92.92 4e-71 POPTRDRAFT_832217 SUI1 family protein
blastp_kegg lcl|fve:101311412 1 113 + 113 none 100.00 113 91.15 5e-71 protein translation factor SUI1 homolog 1-like
blastp_pdb 2ogh_A 12 113 + 102 Gaps:2 92.59 108 57.00 1e-37 mol:protein length:108 Eukaryotic translation initiation factor eIF-
blastp_pdb 2if1_A 12 113 + 102 Gaps:2 82.54 126 57.69 9e-37 mol:protein length:126 EIF1
blastp_pdb 2xzn_F 1 112 + 112 Gaps:12 99.01 101 44.00 4e-22 mol:protein length:101 EIF1
blastp_pdb 2xzm_F 1 112 + 112 Gaps:12 99.01 101 44.00 4e-22 mol:protein length:101 EIF1
blastp_uniprot_sprot sp|O48650|SUI1_SALBA 1 113 + 113 none 100.00 113 91.15 1e-71 Protein translation factor SUI1 homolog OS Salix bakko PE 3 SV 1
blastp_uniprot_sprot sp|P41568|SUI11_ARATH 1 113 + 113 none 100.00 113 89.38 2e-71 Protein translation factor SUI1 homolog 1 OS Arabidopsis thaliana GN At4g27130 PE 3 SV 2
blastp_uniprot_sprot sp|Q9SQF4|SUI1_BRAOL 1 113 + 113 none 100.00 113 88.50 2e-70 Protein translation factor SUI1 homolog OS Brassica oleracea PE 3 SV 1
blastp_uniprot_sprot sp|Q94JV4|SUI12_ARATH 1 113 + 113 none 100.00 113 87.61 7e-70 Protein translation factor SUI1 homolog 2 OS Arabidopsis thaliana GN At1g54290 PE 3 SV 1
blastp_uniprot_sprot sp|Q0D5W6|SUI1_ORYSJ 1 113 + 113 Gaps:2 100.00 115 88.70 1e-69 Protein translation factor SUI1 homolog OS Oryza sativa subsp. japonica GN GOS2 PE 3 SV 1
blastp_uniprot_sprot sp|A6MZM2|SUI1_ORYSI 1 113 + 113 Gaps:2 100.00 115 88.70 1e-69 Protein translation factor SUI1 homolog OS Oryza sativa subsp. indica GN GOS2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SM41|SUI1_SPOST 1 113 + 113 Gaps:2 100.00 115 87.83 4e-69 Protein translation factor SUI1 homolog OS Sporobolus stapfianus PE 3 SV 1
blastp_uniprot_sprot sp|P56330|SUI1_MAIZE 1 113 + 113 Gaps:2 100.00 115 87.83 7e-69 Protein translation factor SUI1 homolog OS Zea mays GN TIF PE 3 SV 1
blastp_uniprot_sprot sp|O82569|SUI1_PIMBR 1 113 + 113 none 100.00 113 76.11 3e-59 Protein translation factor SUI1 homolog OS Pimpinella brachycarpa PE 3 SV 1
blastp_uniprot_sprot sp|P61220|EIF1B_PIG 12 113 + 102 Gaps:2 92.04 113 59.62 2e-37 Eukaryotic translation initiation factor 1b OS Sus scrofa GN EIF1B PE 3 SV 1
rpsblast_cdd gnl|CDD|130228 5 113 + 109 Gaps:1 100.00 110 64.55 1e-45 TIGR01160 SUI1_MOF2 translation initiation factor SUI1 eukaryotic. Alternate name: MOF2. A similar protein family (see TIGRFAMs model TIGR01158) is found in prokaryotes. The human proteins complements a yeast SUI1 mutatation.
rpsblast_cdd gnl|CDD|211318 29 112 + 84 none 100.00 84 67.86 7e-38 cd11566 eIF1_SUI1 Eukaryotic initiation factor 1. eIF1/SUI1 (eukaryotic initiation factor 1) plays an important role in accurate initiator codon recognition during translation initiation. eIF1 interacts with 18S rRNA in the 40S ribosomal subunit during eukaryotic translation initiation. Point mutations in the yeast eIF1 implicate the protein in maintaining accurate start-site selection but its mechanism of action is unknown.
rpsblast_cdd gnl|CDD|201688 25 101 + 77 Gaps:5 100.00 74 36.49 4e-16 pfam01253 SUI1 Translation initiation factor SUI1.
rpsblast_cdd gnl|CDD|30373 1 111 + 111 Gaps:11 98.08 104 32.35 2e-13 COG0023 SUI1 Translation initiation factor 1 (eIF-1/SUI1) and related proteins [Translation ribosomal structure and biogenesis].
rpsblast_cdd gnl|CDD|211317 31 111 + 81 Gaps:4 98.72 78 32.47 6e-11 cd00474 eIF1_SUI1_like Eukaryotic initiation factor 1 and related proteins. Members of the eIF1/SUI1 (eukaryotic initiation factor 1) family are found in eukaryotes archaea and some bacteria eukaryotic members are understood to play an important role in accurate initiator codon recognition during translation initiation. eIF1 interacts with 18S rRNA in the 40S ribosomal subunit during eukaryotic translation initiation. Point mutations in the yeast eIF1 implicate the protein in maintaining accurate start-site selection but its mechanism of action is unknown. The function of non-eukaryotic family members is also unclear.
rpsblast_cdd gnl|CDD|211321 31 110 + 80 Gaps:9 97.65 85 27.71 8e-08 cd11608 eIF2D_C C-terminal domain of eIF2D and related proteins. eIF2D translation initiation factor (also known as ligatin) is involved in the recruitment and delivery of aminoacyl-tRNAs to the P-site of the eukaryotic ribosome in a GTP-independent manner.

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 26 105 80 PF01253 none Translation initiation factor SUI1 IPR001950
SUPERFAMILY 4 113 110 SSF55159 none none IPR001950
PANTHER 7 113 107 PTHR10388 none none none
TIGRFAM 8 113 106 TIGR01160 none SUI1_MOF2: translation initiation factor SUI1 IPR005874
ProSiteProfiles 31 101 71 PS50296 none Translation initiation factor SUI1 family profile. IPR001950
Gene3D 7 113 107 G3DSA:3.30.780.10 none none IPR001950
PIRSF 1 113 113 PIRSF004499 none none IPR005874

0 Localization

0 Qtllist

0 Targeting