Protein : Qrob_P0728510.2 Q. robur
Protein Identifier  ? Qrob_P0728510.2 Organism . Name  Quercus robur
Score  89.0 Score Type  egn
Protein Description  (M=1) PTHR10909:SF122 - PREDICTED: HYPOTHETICAL PROTEIN, PARTIAL Code Enzyme  EC:1.3.3.6
Gene Prediction Quality  validated Protein length 

Sequence

Length: 439  
Kegg Orthology  K00232
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0003995 acyl-CoA dehydrogenase activity Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor.
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
GO:0050660 flavin adenine dinucleotide binding Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.

47 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0186930 1 438 + 438 Gaps:2 100.00 440 86.59 0.0 acyl-CoA dehydrogenase putative (EC:1.3.3.6)
blastp_kegg lcl|tcc:TCM_021674 1 438 + 438 none 91.82 477 84.25 0.0 Acyl-CoA oxidase 4
blastp_kegg lcl|pmum:103341754 8 438 + 431 Gaps:1 98.86 437 85.42 0.0 acyl-coenzyme A oxidase 4 peroxisomal
blastp_kegg lcl|pper:PRUPE_ppa005916mg 8 438 + 431 Gaps:1 98.86 437 85.42 0.0 hypothetical protein
blastp_kegg lcl|fve:101307900 9 438 + 430 Gaps:1 98.62 435 85.78 0.0 acyl-coenzyme A oxidase 4 peroxisomal-like
blastp_kegg lcl|vvi:100257352 4 438 + 435 Gaps:1 97.76 446 83.72 0.0 acyl-coenzyme A oxidase 4 peroxisomal-like
blastp_kegg lcl|pxb:103966317 8 438 + 431 Gaps:1 98.86 437 84.26 0.0 acyl-coenzyme A oxidase 4 peroxisomal-like
blastp_kegg lcl|mdm:103408450 8 438 + 431 Gaps:1 98.86 437 84.26 0.0 acyl-coenzyme A oxidase 4 peroxisomal-like
blastp_kegg lcl|cit:102613384 1 438 + 438 Gaps:1 100.00 439 84.74 0.0 acyl-coenzyme A oxidase 4 peroxisomal-like
blastp_kegg lcl|pop:POPTR_0016s12540g 9 438 + 430 Gaps:1 85.86 502 84.92 0.0 POPTRDRAFT_735866 hypothetical protein
blastp_pdb 2ix5_D 1 434 + 434 Gaps:1 99.77 436 81.61 0.0 mol:protein length:436 ACYL-COENZYME A OXIDASE 4 PEROXISOMAL
blastp_pdb 2ix5_C 1 434 + 434 Gaps:1 99.77 436 81.61 0.0 mol:protein length:436 ACYL-COENZYME A OXIDASE 4 PEROXISOMAL
blastp_pdb 2ix5_B 1 434 + 434 Gaps:1 99.77 436 81.61 0.0 mol:protein length:436 ACYL-COENZYME A OXIDASE 4 PEROXISOMAL
blastp_pdb 2ix5_A 1 434 + 434 Gaps:1 99.77 436 81.61 0.0 mol:protein length:436 ACYL-COENZYME A OXIDASE 4 PEROXISOMAL
blastp_pdb 2ix6_F 1 434 + 434 Gaps:1 96.88 449 81.61 0.0 mol:protein length:449 ACYL-COENZYME A OXIDASE 4 PEROXISOMAL
blastp_pdb 2ix6_E 1 434 + 434 Gaps:1 96.88 449 81.61 0.0 mol:protein length:449 ACYL-COENZYME A OXIDASE 4 PEROXISOMAL
blastp_pdb 2ix6_D 1 434 + 434 Gaps:1 96.88 449 81.61 0.0 mol:protein length:449 ACYL-COENZYME A OXIDASE 4 PEROXISOMAL
blastp_pdb 2ix6_C 1 434 + 434 Gaps:1 96.88 449 81.61 0.0 mol:protein length:449 ACYL-COENZYME A OXIDASE 4 PEROXISOMAL
blastp_pdb 2ix6_B 1 434 + 434 Gaps:1 96.88 449 81.61 0.0 mol:protein length:449 ACYL-COENZYME A OXIDASE 4 PEROXISOMAL
blastp_pdb 2ix6_A 1 434 + 434 Gaps:1 96.88 449 81.61 0.0 mol:protein length:449 ACYL-COENZYME A OXIDASE 4 PEROXISOMAL
blastp_uniprot_sprot sp|Q96329|ACOX4_ARATH 1 434 + 434 Gaps:1 99.77 436 81.61 0.0 Acyl-coenzyme A oxidase 4 peroxisomal OS Arabidopsis thaliana GN ACX4 PE 1 SV 1
blastp_uniprot_sprot sp|Q20772|GCDH_CAEEL 46 427 + 382 Gaps:3 94.13 409 35.58 1e-78 Probable glutaryl-CoA dehydrogenase mitochondrial OS Caenorhabditis elegans GN F54D5.7 PE 1 SV 1
blastp_uniprot_sprot sp|Q54R47|GCDH_DICDI 45 427 + 383 Gaps:4 90.71 420 35.43 3e-67 Glutaryl-CoA dehydrogenase mitochondrial OS Dictyostelium discoideum GN gcdh PE 3 SV 1
blastp_uniprot_sprot sp|Q60759|GCDH_MOUSE 50 427 + 378 Gaps:5 86.53 438 35.62 6e-67 Glutaryl-CoA dehydrogenase mitochondrial OS Mus musculus GN Gcdh PE 1 SV 2
blastp_uniprot_sprot sp|Q8HXX8|GCDH_MACFA 50 427 + 378 Gaps:3 86.53 438 35.62 8e-67 Glutaryl-CoA dehydrogenase mitochondrial OS Macaca fascicularis GN GCDH PE 2 SV 1
blastp_uniprot_sprot sp|Q2KHZ9|GCDH_BOVIN 50 427 + 378 Gaps:3 86.53 438 35.62 9e-67 Glutaryl-CoA dehydrogenase mitochondrial OS Bos taurus GN GCDH PE 2 SV 1
blastp_uniprot_sprot sp|Q92947|GCDH_HUMAN 50 427 + 378 Gaps:3 86.53 438 35.88 2e-66 Glutaryl-CoA dehydrogenase mitochondrial OS Homo sapiens GN GCDH PE 1 SV 1
blastp_uniprot_sprot sp|P81140|GCDH_PIG 50 427 + 378 Gaps:4 93.14 408 35.79 2e-65 Glutaryl-CoA dehydrogenase mitochondrial (Fragment) OS Sus scrofa GN GCDH PE 1 SV 1
blastp_uniprot_sprot sp|P45857|ACDB_BACSU 54 423 + 370 Gaps:7 98.94 379 31.47 4e-50 Acyl-CoA dehydrogenase OS Bacillus subtilis (strain 168) GN mmgC PE 2 SV 3
blastp_uniprot_sprot sp|P52042|ACDS_CLOAB 50 416 + 367 Gaps:5 98.15 379 30.38 4e-46 Acyl-CoA dehydrogenase short-chain specific OS Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN bcd PE 3 SV 1

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 55 164 110 PF02771 none Acyl-CoA dehydrogenase, N-terminal domain IPR013786
PANTHER 11 428 418 PTHR10909 none none none
Gene3D 42 166 125 G3DSA:1.10.540.10 none none IPR013786
SUPERFAMILY 45 274 230 SSF56645 none none IPR009100
PANTHER 11 428 418 PTHR10909:SF122 none none none
Pfam 280 418 139 PF00441 none Acyl-CoA dehydrogenase, C-terminal domain IPR009075
ProSitePatterns 380 399 20 PS00073 none Acyl-CoA dehydrogenases signature 2. IPR006089
Gene3D 169 262 94 G3DSA:2.40.110.10 none none IPR006091
Gene3D 263 423 161 G3DSA:1.20.140.10 none none none
Pfam 170 220 51 PF02770 none Acyl-CoA dehydrogenase, middle domain IPR006091
SUPERFAMILY 279 424 146 SSF47203 none none IPR009075

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5

0 Targeting