Protein : Qrob_P0725950.2 Q. robur
Protein Identifier  ? Qrob_P0725950.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR10836:SF39 - GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPB, CHLOROPLASTIC (PTHR10836:SF39) Code Enzyme  EC:1.2.1.13
Gene Prediction Quality  validated Protein length 

Sequence

Length: 295  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1601720 78 227 + 150 Gaps:54 44.54 458 65.20 1e-76 glyceraldehyde 3-phosphate dehydrogenase putative (EC:1.2.1.13)
blastp_kegg lcl|pop:POPTR_0005s27550g 65 229 + 165 Gaps:57 49.12 452 59.46 7e-74 POPTRDRAFT_831715 glyceraldehyde-3-phosphate dehydrogenase family protein
blastp_kegg lcl|gmx:732571 76 227 + 152 Gaps:54 45.68 451 61.17 1e-72 glyceraldehyde-3-phosphate dehydrogenase B subunit
blastp_kegg lcl|pop:POPTR_0002s00840g 78 227 + 150 Gaps:54 43.04 474 62.75 2e-72 POPTRDRAFT_412234 hypothetical protein
blastp_kegg lcl|pxb:103961743 78 227 + 150 Gaps:54 45.13 452 62.75 4e-72 GDPHb glyceraldehyde-3-phosphate dehydrogenase B chloroplastic
blastp_kegg lcl|mdm:103409404 78 227 + 150 Gaps:54 45.13 452 62.75 4e-72 glyceraldehyde-3-phosphate dehydrogenase B chloroplastic
blastp_kegg lcl|gmx:100806482 76 227 + 152 Gaps:54 45.68 451 61.17 1e-71 glyceraldehyde-3-phosphate dehydrogenase B chloroplastic-like
blastp_kegg lcl|tcc:TCM_034424 78 229 + 152 Gaps:54 45.58 452 61.65 2e-70 Glyceraldehyde-3-phosphate dehydrogenase B subunit
blastp_kegg lcl|pvu:PHAVU_009G006600g 78 227 + 150 Gaps:54 45.23 451 59.80 7e-69 hypothetical protein
blastp_kegg lcl|csv:101205112 78 229 + 152 Gaps:55 45.45 451 60.49 1e-66 glyceraldehyde-3-phosphate dehydrogenase B chloroplastic-like
blastp_pdb 2pkq_T 117 227 + 111 none 30.16 368 85.59 1e-61 mol:protein length:368 Glyceraldehyde-3-phosphate dehydrogenase B
blastp_pdb 2pkq_Q 117 227 + 111 none 30.16 368 85.59 1e-61 mol:protein length:368 Glyceraldehyde-3-phosphate dehydrogenase B
blastp_pdb 2pkq_O 117 227 + 111 none 30.16 368 85.59 1e-61 mol:protein length:368 Glyceraldehyde-3-phosphate dehydrogenase B
blastp_pdb 1rm5_B 100 219 + 120 Gaps:4 36.20 337 66.39 4e-45 mol:protein length:337 Glyceraldehyde 3-phosphate dehydrogenase A
blastp_pdb 1rm5_A 100 219 + 120 Gaps:4 36.20 337 66.39 4e-45 mol:protein length:337 Glyceraldehyde 3-phosphate dehydrogenase A
blastp_pdb 1rm5_O 100 219 + 120 Gaps:4 36.20 337 66.39 4e-45 mol:protein length:337 Glyceraldehyde 3-phosphate dehydrogenase A
blastp_pdb 2pkq_S 100 219 + 120 Gaps:4 36.20 337 66.39 5e-45 mol:protein length:337 Glyceraldehyde-3-phosphate dehydrogenase A
blastp_pdb 2pkq_R 100 219 + 120 Gaps:4 36.20 337 66.39 5e-45 mol:protein length:337 Glyceraldehyde-3-phosphate dehydrogenase A
blastp_pdb 2pkq_P 100 219 + 120 Gaps:4 36.20 337 66.39 5e-45 mol:protein length:337 Glyceraldehyde-3-phosphate dehydrogenase A
blastp_pdb 2hki_A 100 219 + 120 Gaps:4 36.20 337 66.39 5e-45 mol:protein length:337 Glyceraldehyde-3-phosphate dehydrogenase A c
blastp_uniprot_sprot sp|P09044|G3PB_TOBAC 78 227 + 150 Gaps:56 46.12 438 60.40 1e-67 Glyceraldehyde-3-phosphate dehydrogenase B chloroplastic (Fragment) OS Nicotiana tabacum GN GAPB PE 1 SV 1
blastp_uniprot_sprot sp|P12859|G3PB_PEA 76 227 + 152 Gaps:54 45.68 451 57.77 3e-67 Glyceraldehyde-3-phosphate dehydrogenase B chloroplastic OS Pisum sativum GN GAPB PE 1 SV 2
blastp_uniprot_sprot sp|P25857|G3PB_ARATH 43 228 + 186 Gaps:64 51.90 447 54.31 2e-63 Glyceraldehyde-3-phosphate dehydrogenase GAPB chloroplastic OS Arabidopsis thaliana GN GAPB PE 1 SV 2
blastp_uniprot_sprot sp|P12860|G3PB_SPIOL 76 228 + 153 Gaps:51 45.23 451 55.39 2e-63 Glyceraldehyde-3-phosphate dehydrogenase B chloroplastic OS Spinacia oleracea GN GAPB PE 1 SV 1
blastp_uniprot_sprot sp|P50362|G3PA_CHLRE 101 220 + 120 Gaps:3 32.89 374 67.48 2e-48 Glyceraldehyde-3-phosphate dehydrogenase A chloroplastic OS Chlamydomonas reinhardtii GN GAPA PE 1 SV 1
blastp_uniprot_sprot sp|Q8VXQ9|G3PA_SCEVA 93 224 + 132 Gaps:7 41.72 314 64.12 8e-47 Glyceraldehyde-3-phosphate dehydrogenase A chloroplastic (Fragment) OS Scenedesmus vacuolatus GN GapA PE 2 SV 1
blastp_uniprot_sprot sp|P34919|G3PA_CHOCR 117 228 + 112 Gaps:1 26.81 414 69.37 2e-44 Glyceraldehyde-3-phosphate dehydrogenase chloroplastic OS Chondrus crispus GN GAPA PE 2 SV 1
blastp_uniprot_sprot sp|P19866|G3PA_SPIOL 100 219 + 120 Gaps:4 30.42 401 66.39 3e-44 Glyceraldehyde-3-phosphate dehydrogenase A chloroplastic OS Spinacia oleracea GN GAPA PE 1 SV 2
blastp_uniprot_sprot sp|P25856|G3PA1_ARATH 100 220 + 121 Gaps:4 31.06 396 67.48 2e-42 Glyceraldehyde-3-phosphate dehydrogenase GAPA1 chloroplastic OS Arabidopsis thaliana GN GAPA1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9LPW0|G3PA2_ARATH 100 220 + 121 Gaps:4 30.83 399 65.85 3e-42 Glyceraldehyde 3-phosphate dehydrogenase GAPA2 chloroplastic OS Arabidopsis thaliana GN GAPA2 PE 2 SV 1

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 115 226 112 PF00044 "Reactome:REACT_474" Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IPR020828
SUPERFAMILY 116 236 121 SSF51735 none none none
Gene3D 113 225 113 G3DSA:3.40.50.720 none none IPR016040
PANTHER 117 225 109 PTHR10836 "Reactome:REACT_474";signature_desc=GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE none IPR020831
SMART 100 228 129 SM00846 "Reactome:REACT_474" Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IPR020828
PANTHER 117 225 109 PTHR10836:SF39 none none none

0 Localization

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting