Protein : Qrob_P0725160.2 Q. robur
Protein Identifier  ? Qrob_P0725160.2 Organism . Name  Quercus robur
Score  93.0 Score Type  egn
Protein Description  (M=7) PTHR31042:SF8 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN (PTHR31042:SF8) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 177  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0008375 acetylglucosaminyltransferase activity Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to a sugar.

11 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_037252 1 176 + 176 Gaps:4 45.41 392 76.97 3e-91 Core-2/I-branching beta-1 6-N-acetylglucosaminyltransferase family protein
blastp_kegg lcl|cic:CICLE_v10008613mg 1 176 + 176 Gaps:1 45.45 385 76.00 4e-90 hypothetical protein
blastp_kegg lcl|cit:102614541 1 176 + 176 Gaps:1 45.45 385 76.00 4e-90 hypothetical protein
blastp_kegg lcl|fve:101301742 1 176 + 176 none 45.24 389 72.16 1e-87 uncharacterized protein LOC101301742
blastp_kegg lcl|vvi:100249300 1 176 + 176 Gaps:1 48.88 358 70.86 6e-86 uncharacterized LOC100249300
blastp_kegg lcl|pxb:103929645 1 176 + 176 none 45.24 389 68.75 8e-82 uncharacterized LOC103929645
blastp_kegg lcl|pmum:103320525 1 176 + 176 Gaps:1 45.10 388 74.86 4e-81 uncharacterized LOC103320525
blastp_kegg lcl|pop:POPTR_0006s24970g 1 176 + 176 Gaps:1 45.45 385 70.86 3e-80 POPTRDRAFT_832106 hypothetical protein
blastp_kegg lcl|pop:POPTR_0018s04680g 1 176 + 176 Gaps:1 45.45 385 68.57 8e-78 POPTRDRAFT_577893 hypothetical protein
blastp_kegg lcl|gmx:100785919 1 176 + 176 Gaps:8 44.62 381 71.18 2e-76 uncharacterized LOC100785919
rpsblast_cdd gnl|CDD|202252 119 172 + 54 Gaps:5 24.38 242 40.68 1e-11 pfam02485 Branch Core-2/I-Branching enzyme. This is a family of two different beta-1 6-N-acetylglucosaminyltransferase enzymes I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans.

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 119 174 56 PF02485 none Core-2/I-Branching enzyme IPR003406
Phobius 1 30 30 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 31 53 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 1 176 176 PTHR31042:SF8 none none none
Phobius 54 176 123 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 1 176 176 PTHR31042 none none none

1 Localization

Analysis Start End Length
TMHMM 31 53 22

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4

0 Targeting